Miyakogusa Predicted Gene

Lj6g3v1161820.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1161820.1 Non Chatacterized Hit- tr|C5Y1H4|C5Y1H4_SORBI
Putative uncharacterized protein Sb04g032730
OS=Sorghu,40.35,0.000000000006,DOG1,DOG1 domain; seg,NULL,CUFF.59157.1
         (286 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g20200.1                                                       335   4e-92

>Glyma15g20200.1 
          Length = 261

 Score =  335 bits (858), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 175/275 (63%), Positives = 199/275 (72%), Gaps = 21/275 (7%)

Query: 11  QSQSQGFKEYYSEWFTALKNNLLPLLRRSISGDSPTILSTHVEMLHQHFQSYYHALDAAI 70
           + QS+ FKEYY+EWF  LKNN LPLLR SISGDS TILSTHVEMLHQHFQSYYHALDAA 
Sbjct: 3   KQQSRSFKEYYAEWFNTLKNNHLPLLRHSISGDSLTILSTHVEMLHQHFQSYYHALDAAA 62

Query: 71  TSDPTQLLSQPWRHPLEIPLLWLGDLHPSIFTNLARSFLXXXXXXXXXXXXXXXXXXXXX 130
           TSD +QLLSQ WR+ LE PLLWLGDLHPS+FTNLARSFL                     
Sbjct: 63  TSDASQLLSQEWRNSLEKPLLWLGDLHPSLFTNLARSFLQDEHSPDHTDDEDDSDPHHHH 122

Query: 131 XXXXXNHSLADQIDRVXXXXXXLNLHRPWQVALAWRNPPESLLLRMDEIECGLRVIVPTL 190
                   L +               RPWQVA+AWRNP E+L  RMD+IECGLRVIVP L
Sbjct: 123 HHHHH-FPLPE---------------RPWQVAMAWRNPSEALTARMDQIECGLRVIVPAL 166

Query: 191 SDRLARAEAGFVHRVVGDWFQCRE-----SKGAAKVAVGEDVRAHMDEVVSVFLCANRVR 245
           SDRL  AE  FV RV+G+WF+CR+     S  ++KVAVG DV+AHM+E+VSVFL ANR+R
Sbjct: 167 SDRLKHAEDAFVGRVMGNWFRCRDHHHKGSGASSKVAVGADVKAHMEELVSVFLYANRLR 226

Query: 246 RSVLVDIISAATVYQAALFLEGLAQFLIGFKDHDL 280
           R+VLVDI+SA TVYQAALFLEGLAQFLIGF+DH+L
Sbjct: 227 RNVLVDILSATTVYQAALFLEGLAQFLIGFRDHEL 261