Miyakogusa Predicted Gene

Lj6g3v1126350.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1126350.2 Non Chatacterized Hit- tr|B4FEF9|B4FEF9_MAIZE
Uncharacterized protein OS=Zea mays PE=4 SV=1,76.92,9e-19,Helical
region found in SNAREs,Target SNARE coiled-coil domain; NOVEL PLANT
SNARE,NULL; VESICLE TRAN,CUFF.59126.2
         (270 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g04460.1                                                       457   e-129
Glyma13g18030.1                                                       456   e-129
Glyma17g04460.2                                                       374   e-104
Glyma17g15990.1                                                       295   3e-80
Glyma05g05720.1                                                       159   3e-39
Glyma05g05710.1                                                       136   3e-32
Glyma10g11440.1                                                       110   1e-24
Glyma05g05720.2                                                        97   2e-20

>Glyma17g04460.1 
          Length = 269

 Score =  457 bits (1176), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 227/267 (85%), Positives = 248/267 (92%)

Query: 4   ANLQMSPQVEQIHGEIRDHFRALANGFPRLDKIKDSNRQSKQLEELAEKMRECQRLIKDF 63
           +NLQMSPQVEQIHGEIRD+FRALANGF +LDKIKD+NRQS QLEEL +KMREC+RLIK++
Sbjct: 3   SNLQMSPQVEQIHGEIRDNFRALANGFQKLDKIKDANRQSNQLEELTDKMRECKRLIKEY 62

Query: 64  DREIKDEEGRNPPEVSKQLNDEKQSMIREHNSYVALRKTYMNNLGNKKLELFDMGAGASE 123
           DREIKDEEGRNPPEV+KQLNDEKQSMI+E NSYVALRKTYMN +GNKKLELFD GAGAS 
Sbjct: 63  DREIKDEEGRNPPEVNKQLNDEKQSMIKELNSYVALRKTYMNTIGNKKLELFDNGAGASV 122

Query: 124 PIAEDNVQLASELSNQELINAGMKTMDETDQAIERSNQVVHQTIEMGTQTATTLNGQTEQ 183
             AE+NVQLASE+SNQELINAG KTMDETDQAIERS QVVHQTIE+GTQTA TL GQTEQ
Sbjct: 123 STAEENVQLASEMSNQELINAGTKTMDETDQAIERSKQVVHQTIEVGTQTAATLKGQTEQ 182

Query: 184 MGRIINELDSLQFSIKKASQLVKEIGRKVATDTCIMLFLFLIVCGVAAIIVVKFVNPNNK 243
           MGRI+NELDS+QFSIKKASQLVKEIGR+VATD CIMLFLFLIVCGV AIIVVK V+PNNK
Sbjct: 183 MGRIVNELDSIQFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVHPNNK 242

Query: 244 DINDIPGLAPPAPTRRLLYVRTGENFD 270
           DI DIPGLAPP PTRRLLY R+G++FD
Sbjct: 243 DIRDIPGLAPPVPTRRLLYARSGDHFD 269


>Glyma13g18030.1 
          Length = 269

 Score =  456 bits (1174), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 227/267 (85%), Positives = 247/267 (92%)

Query: 4   ANLQMSPQVEQIHGEIRDHFRALANGFPRLDKIKDSNRQSKQLEELAEKMRECQRLIKDF 63
           +NLQMSPQVEQIHGEIRD+FRALANGF +LDKIKD+NRQS QLEEL +KMREC+RLIK+F
Sbjct: 3   SNLQMSPQVEQIHGEIRDNFRALANGFQKLDKIKDANRQSNQLEELTDKMRECKRLIKEF 62

Query: 64  DREIKDEEGRNPPEVSKQLNDEKQSMIREHNSYVALRKTYMNNLGNKKLELFDMGAGASE 123
           DREIKDEEGRNPPEV+KQLNDEKQSMI+E NSYVALRKTYMN +GNKKLELFD GAG S 
Sbjct: 63  DREIKDEEGRNPPEVNKQLNDEKQSMIKELNSYVALRKTYMNTIGNKKLELFDNGAGVSV 122

Query: 124 PIAEDNVQLASELSNQELINAGMKTMDETDQAIERSNQVVHQTIEMGTQTATTLNGQTEQ 183
           P AE+NVQLASE+SNQELINAG KTMDETDQAIERS QVVHQTIE+GTQTA TL GQTEQ
Sbjct: 123 PTAEENVQLASEMSNQELINAGTKTMDETDQAIERSKQVVHQTIEVGTQTAATLKGQTEQ 182

Query: 184 MGRIINELDSLQFSIKKASQLVKEIGRKVATDTCIMLFLFLIVCGVAAIIVVKFVNPNNK 243
           MGRI+NELDS+QFSIKKASQLVKEIGR+VATD CIMLFLFLIVCGV AIIVVK V+PNNK
Sbjct: 183 MGRIVNELDSIQFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVHPNNK 242

Query: 244 DINDIPGLAPPAPTRRLLYVRTGENFD 270
           DI DIPGLAPP PTRRLLY R+G++ D
Sbjct: 243 DIRDIPGLAPPVPTRRLLYARSGDHLD 269


>Glyma17g04460.2 
          Length = 238

 Score =  374 bits (959), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 183/221 (82%), Positives = 203/221 (91%), Gaps = 3/221 (1%)

Query: 4   ANLQMSPQVEQIHGEIRDHFRALANGFPRLDKIKDSNRQSKQLEELAEKMRECQRLIKDF 63
           +NLQMSPQVEQIHGEIRD+FRALANGF +LDKIKD+NRQS QLEEL +KMREC+RLIK++
Sbjct: 3   SNLQMSPQVEQIHGEIRDNFRALANGFQKLDKIKDANRQSNQLEELTDKMRECKRLIKEY 62

Query: 64  DREIKDEEGRNPPEVSKQLNDEKQSMIREHNSYVALRKTYMNNLGNKKLELFDMGAGASE 123
           DREIKDEEGRNPPEV+KQLNDEKQSMI+E NSYVALRKTYMN +GNKKLELFD GAGAS 
Sbjct: 63  DREIKDEEGRNPPEVNKQLNDEKQSMIKELNSYVALRKTYMNTIGNKKLELFDNGAGASV 122

Query: 124 PIAEDNVQLASELSNQELINAGMKTMDETDQAIERSNQVVHQTIEMGTQTATTLNGQTEQ 183
             AE+NVQLASE+SNQELINAG KTMDETDQAIERS QVVHQTIE+GTQTA TL GQTEQ
Sbjct: 123 STAEENVQLASEMSNQELINAGTKTMDETDQAIERSKQVVHQTIEVGTQTAATLKGQTEQ 182

Query: 184 MGRIINELDSLQFSIKKASQLVKEIGRKVATDT---CIMLF 221
           MGRI+NELDS+QFSIKKASQLVKEIGR+VA+ +   CI+ F
Sbjct: 183 MGRIVNELDSIQFSIKKASQLVKEIGRQVASFSLLPCIIYF 223


>Glyma17g15990.1 
          Length = 261

 Score =  295 bits (755), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 155/255 (60%), Positives = 198/255 (77%), Gaps = 3/255 (1%)

Query: 8   MSPQVEQIHGEIRDHFRALANGFPRLDKIKDSNRQSKQLEELAEKMRECQRLIKDFDREI 67
           +S  + +I G I D+FRAL+NGF +L+KIKDSNRQS+QLE+L EK+REC+RLIK+FD+E+
Sbjct: 7   ISEDLAEIDGHIADNFRALSNGFQKLEKIKDSNRQSRQLEDLTEKLRECKRLIKEFDKEV 66

Query: 68  KDEEGRNPPEVSKQLNDEKQSMIREHNSYVALRKTYMNNLGNKKLELFDMGAGASEPIAE 127
           K  E     E +K LN++KQSMI+E NSYVAL+K Y  N+ NK++ELF+   G +E  AE
Sbjct: 67  KTLESSFDRETNKMLNEKKQSMIKELNSYVALKKQYATNIENKRIELFE---GPNEGYAE 123

Query: 128 DNVQLASELSNQELINAGMKTMDETDQAIERSNQVVHQTIEMGTQTATTLNGQTEQMGRI 187
           +N  LAS ++N++L++ G + M+ETDQAIER  +VV  TI +GT TA  L  QTEQM R+
Sbjct: 124 ENGLLASSMTNEQLMDHGNRMMNETDQAIERGKKVVQDTINVGTDTAAALKAQTEQMSRV 183

Query: 188 INELDSLQFSIKKASQLVKEIGRKVATDTCIMLFLFLIVCGVAAIIVVKFVNPNNKDIND 247
           +NELDS+ FSIKKAS+LVKEIGR+VATD CIM  LFLIV GV AII+VK V+P NKDI D
Sbjct: 184 VNELDSIHFSIKKASKLVKEIGRQVATDKCIMALLFLIVIGVIAIIIVKLVHPENKDIRD 243

Query: 248 IPGLAPPAPTRRLLY 262
           IPGLAPP   RRLL+
Sbjct: 244 IPGLAPPVQNRRLLW 258


>Glyma05g05720.1 
          Length = 180

 Score =  159 bits (402), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 83/127 (65%), Positives = 102/127 (80%)

Query: 136 LSNQELINAGMKTMDETDQAIERSNQVVHQTIEMGTQTATTLNGQTEQMGRIINELDSLQ 195
           ++N++L++ G + MDETDQAIER  +VV  TI +GT TA  L  QTEQM R++NELDS+ 
Sbjct: 51  MTNEQLMDHGNRMMDETDQAIERGKKVVQDTINVGTDTAAALKAQTEQMSRVVNELDSIH 110

Query: 196 FSIKKASQLVKEIGRKVATDTCIMLFLFLIVCGVAAIIVVKFVNPNNKDINDIPGLAPPA 255
           FS+KKAS+LVKEIGR+VATD CIM  LFLIV GV AII+VK V+P+NKDI DIPGLAPP 
Sbjct: 111 FSMKKASKLVKEIGRQVATDKCIMALLFLIVIGVIAIIIVKLVHPDNKDIRDIPGLAPPV 170

Query: 256 PTRRLLY 262
             RRLL+
Sbjct: 171 QNRRLLW 177


>Glyma05g05710.1 
          Length = 147

 Score =  136 bits (342), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 69/127 (54%), Positives = 95/127 (74%), Gaps = 3/127 (2%)

Query: 8   MSPQVEQIHGEIRDHFRALANGFPRLDKIKDSNRQSKQLEELAEKMRECQRLIKDFDREI 67
           +S  + +I G I D+FRAL+NGF +L+KIKDSNRQ++QLE+L EK+REC+RLIK+FD+E+
Sbjct: 7   ISEDLAEIDGHIADNFRALSNGFQKLEKIKDSNRQTRQLEDLTEKLRECKRLIKEFDKEV 66

Query: 68  KDEEGRNPPEVSKQLNDEKQSMIREHNSYVALRKTYMNNLGNKKLELFDMGAGASEPIAE 127
           K  E     E +K LN++KQSMI+E NSYV L+K Y  N+ NK++ELF+   G +E   E
Sbjct: 67  KTLENSFDRETNKMLNEKKQSMIKELNSYVGLKKQYATNIENKRIELFE---GPNEGYTE 123

Query: 128 DNVQLAS 134
           +N  LAS
Sbjct: 124 ENGLLAS 130


>Glyma10g11440.1 
          Length = 62

 Score =  110 bits (276), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 54/62 (87%), Positives = 59/62 (95%)

Query: 28 NGFPRLDKIKDSNRQSKQLEELAEKMRECQRLIKDFDREIKDEEGRNPPEVSKQLNDEKQ 87
          NGF RLDKIKDSNRQSKQLEEL +KMREC+RLIK+FDREIKDE+GRN PEV+KQLNDEKQ
Sbjct: 1  NGFERLDKIKDSNRQSKQLEELTDKMRECKRLIKEFDREIKDEDGRNLPEVNKQLNDEKQ 60

Query: 88 SM 89
          SM
Sbjct: 61 SM 62


>Glyma05g05720.2 
          Length = 126

 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 45/74 (60%), Positives = 59/74 (79%)

Query: 136 LSNQELINAGMKTMDETDQAIERSNQVVHQTIEMGTQTATTLNGQTEQMGRIINELDSLQ 195
           ++N++L++ G + MDETDQAIER  +VV  TI +GT TA  L  QTEQM R++NELDS+ 
Sbjct: 51  MTNEQLMDHGNRMMDETDQAIERGKKVVQDTINVGTDTAAALKAQTEQMSRVVNELDSIH 110

Query: 196 FSIKKASQLVKEIG 209
           FS+KKAS+LVKEIG
Sbjct: 111 FSMKKASKLVKEIG 124