Miyakogusa Predicted Gene

Lj6g3v1126350.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1126350.1 tr|D7L787|D7L787_ARALL NPSN13 OS=Arabidopsis
lyrata subsp. lyrata GN=ARALYDRAFT_479220 PE=4 SV=1,72.73,3e-19,
,CUFF.59126.1
         (103 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g18030.1                                                       105   1e-23
Glyma17g04460.2                                                       104   2e-23
Glyma17g04460.1                                                       103   4e-23
Glyma17g15990.1                                                        55   1e-08

>Glyma13g18030.1 
          Length = 269

 Score =  105 bits (261), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 51/68 (75%), Positives = 56/68 (82%)

Query: 6   QWYMNNLGNKKLELFDMGAGASEPIAEDNVQLASELSNQELINAGMKTMDETDQAIERSN 65
           + YMN +GNKKLELFD GAG S P AE+NVQLASE+SNQELINAG KTMDETDQAIERS 
Sbjct: 100 KTYMNTIGNKKLELFDNGAGVSVPTAEENVQLASEMSNQELINAGTKTMDETDQAIERSK 159

Query: 66  QVTLQNYD 73
           QV  Q  +
Sbjct: 160 QVVHQTIE 167


>Glyma17g04460.2 
          Length = 238

 Score =  104 bits (259), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 51/68 (75%), Positives = 56/68 (82%)

Query: 6   QWYMNNLGNKKLELFDMGAGASEPIAEDNVQLASELSNQELINAGMKTMDETDQAIERSN 65
           + YMN +GNKKLELFD GAGAS   AE+NVQLASE+SNQELINAG KTMDETDQAIERS 
Sbjct: 100 KTYMNTIGNKKLELFDNGAGASVSTAEENVQLASEMSNQELINAGTKTMDETDQAIERSK 159

Query: 66  QVTLQNYD 73
           QV  Q  +
Sbjct: 160 QVVHQTIE 167


>Glyma17g04460.1 
          Length = 269

 Score =  103 bits (257), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 51/65 (78%), Positives = 55/65 (84%)

Query: 6   QWYMNNLGNKKLELFDMGAGASEPIAEDNVQLASELSNQELINAGMKTMDETDQAIERSN 65
           + YMN +GNKKLELFD GAGAS   AE+NVQLASE+SNQELINAG KTMDETDQAIERS 
Sbjct: 100 KTYMNTIGNKKLELFDNGAGASVSTAEENVQLASEMSNQELINAGTKTMDETDQAIERSK 159

Query: 66  QVTLQ 70
           QV  Q
Sbjct: 160 QVVHQ 164


>Glyma17g15990.1 
          Length = 261

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 44/63 (69%), Gaps = 3/63 (4%)

Query: 6   QWYMNNLGNKKLELFDMGAGASEPIAEDNVQLASELSNQELINAGMKTMDETDQAIERSN 65
           + Y  N+ NK++ELF+   G +E  AE+N  LAS ++N++L++ G + M+ETDQAIER  
Sbjct: 100 KQYATNIENKRIELFE---GPNEGYAEENGLLASSMTNEQLMDHGNRMMNETDQAIERGK 156

Query: 66  QVT 68
           +V 
Sbjct: 157 KVV 159