Miyakogusa Predicted Gene

Lj6g3v1094850.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1094850.1 Non Chatacterized Hit- tr|I1MHT6|I1MHT6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56638
PE,87.76,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; NONSENSE-MEDIATED MRNA
DECAY PROTEIN 2 (UP-FRAMESHIFT SUPPRESSOR,CUFF.59123.1
         (1208 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g22750.1                                                      1900   0.0  
Glyma09g11480.1                                                      1882   0.0  

>Glyma15g22750.1 
          Length = 1189

 Score = 1900 bits (4921), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 953/1175 (81%), Positives = 995/1175 (84%), Gaps = 34/1175 (2%)

Query: 1    MDQHEDECRTGGESNSKQDDEEAVAHLEEIKKSIEAKIALRQSNLNPDRPDSGFLRTLDS 60
            MD HEDE      SNSKQDDEEAVA LEEIKKSIEAK+ALRQSNLNP+RPDSGFLRTLDS
Sbjct: 1    MDHHEDE------SNSKQDDEEAVARLEEIKKSIEAKLALRQSNLNPERPDSGFLRTLDS 54

Query: 61   SIKRNTAVIKKLKQINEELREALMDELRTVNMSKFVSEAVAAICDAKLRSSDIQAAVQIC 120
            SIKRNTAVIKKLKQINEE REALMDELR+VN+SKFVSEAVAAICDAKLRSSDIQAAVQIC
Sbjct: 55   SIKRNTAVIKKLKQINEEQREALMDELRSVNLSKFVSEAVAAICDAKLRSSDIQAAVQIC 114

Query: 121  SLLHQRYKDFAPSLIQGLLKIFSPGKPGDESDTDKNXXXXXXXXXXXXXXXXFFVGVIED 180
            SLLHQRYKDFAPSL+QGLLK+FSPGKPGDESDTD+N                FFVGVIED
Sbjct: 115  SLLHQRYKDFAPSLVQGLLKVFSPGKPGDESDTDRNLKAMKKRSSLKLLLELFFVGVIED 174

Query: 181  GAIFITIIKDLTSVEQLKDRDATQTSLTLLSSFARQGRIFLGLSVNGPEIHEEFFKGLAI 240
            G IFI IIKDL+S EQLKDRDA QTSLTLLSSFARQGRIFLGLSV+GPEIHEEFFKGL I
Sbjct: 175  GGIFINIIKDLSSGEQLKDRDAAQTSLTLLSSFARQGRIFLGLSVSGPEIHEEFFKGLNI 234

Query: 241  TADQKKVLRKACYAFYDAAAELLQSEHSSLRVMEHENSKILNAKGELSEENVASYEKLRK 300
            TADQKKV RKACY+FYDAAAELLQSEHSSLR+MEHENSKILNAKGELS+EN+ASYEKLRK
Sbjct: 235  TADQKKVFRKACYSFYDAAAELLQSEHSSLRLMEHENSKILNAKGELSDENIASYEKLRK 294

Query: 301  SYDHLYRNVSSLAEALDMQPPVMPEDGHTTRVTSGEEAISSASGKDSSVVEPIWDDEDTR 360
            SYDHLYRNV+SLAEALDMQPPVMPEDGHTTRVTSGE+ +SSASGKDSSVVEPIWDDEDTR
Sbjct: 295  SYDHLYRNVASLAEALDMQPPVMPEDGHTTRVTSGEDGVSSASGKDSSVVEPIWDDEDTR 354

Query: 361  AFYECLPDLRAFVPAVLLGETEPKSNEQSVKSQDQSTEILPESDKGQ-TTRESGEVSTDP 419
             FYECLPDLRAFVPAVLLGETEPKS+EQS K+QD +TEILPESDKGQ TT ESGEVST+ 
Sbjct: 355  TFYECLPDLRAFVPAVLLGETEPKSSEQSAKNQDLTTEILPESDKGQQTTHESGEVSTES 414

Query: 420  SALPEGESIQGVKGKEEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 479
            +ALPE ES + VK KEE+                                          
Sbjct: 415  NALPEAESTERVKDKEEKDKSNELDREKEKEKDNDKKGENEKDK---------------- 458

Query: 480  XXXXLRSLEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKKLVRALFSVPRTSL 539
                LRSLEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKKLVRALF+VPRTSL
Sbjct: 459  ----LRSLEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKKLVRALFNVPRTSL 514

Query: 540  ELLPYYSRMVATLSTCMKDVSSILLQMLEEEFNFLINKKDQMNIETKIKNIRFIGELCKF 599
            ELLPYYSRMVATLST MKDVSSILLQMLEEEFNFLINKKDQMNIE+KI+NIRFIGELCKF
Sbjct: 515  ELLPYYSRMVATLSTSMKDVSSILLQMLEEEFNFLINKKDQMNIESKIRNIRFIGELCKF 574

Query: 600  KIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKN 659
            KIAP GLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPET+IRMANMLEILMRLKN
Sbjct: 575  KIAPPGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETTIRMANMLEILMRLKN 634

Query: 660  VKNLDPRHSTLVENAYYLCKPPERSARVAKVRPPLHQYIRKLLFSDLDKSTIEHVLRQLR 719
            VKNLDPRHSTLVENAYYLCKPPERSARVAKVRPPLHQYIRKLLFSDLDKSTIEHVLRQLR
Sbjct: 635  VKNLDPRHSTLVENAYYLCKPPERSARVAKVRPPLHQYIRKLLFSDLDKSTIEHVLRQLR 694

Query: 720  KLPWSECEPYLLKCFMKVYKGKYGQIHLIASLAAGLSRYHDEFAVAIVDEVLEEIRIGLE 779
            KLPW+ECEPYLLKCFMKVYKGKYGQIHLIASLAAGLSRYHDEFAVAIVDEVLEEIR+GLE
Sbjct: 695  KLPWNECEPYLLKCFMKVYKGKYGQIHLIASLAAGLSRYHDEFAVAIVDEVLEEIRVGLE 754

Query: 780  LNDYGMQQRRVAYMRFLGELYNYKHADSSVIFETLYLILVYGHGTPEQDVLDPPEDFFRI 839
            LNDYGMQQRR+AYMRFLGELYNY+H DSSVIFETLYLIL++GHGT EQDVLDPPED FR+
Sbjct: 755  LNDYGMQQRRIAYMRFLGELYNYEHVDSSVIFETLYLILIHGHGTSEQDVLDPPEDCFRM 814

Query: 840  RLIITLLETCGHYFDHGSSKRKLDRFLIHFQRYILSKGALPLDVEFDLQDLFVDLRPNMV 899
            RLIITLLETCGHYFD GSSKRKLDRFLIHFQRYILSKG LPLD+EFDLQDLFVDLRPNMV
Sbjct: 815  RLIITLLETCGHYFDRGSSKRKLDRFLIHFQRYILSKGTLPLDIEFDLQDLFVDLRPNMV 874

Query: 900  RYSSIXXXXXXXXXXXXHDRIVSADKASGEKQS--EKPPRRTTSSM-VVGNGQSIDNGAE 956
            RY+SI            HDRIVSADK S EK S  EKP  RTTS+  VVGNGQSIDNG E
Sbjct: 875  RYTSIEEVNAALVELEEHDRIVSADKVSSEKHSGTEKPLIRTTSTTAVVGNGQSIDNGTE 934

Query: 957  DNGVQDDVNDGEADSGSDVIXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXX 1015
            +N VQDD ND E DSGSD I                                        
Sbjct: 935  ENEVQDD-NDSETDSGSDTIDVEGHDEELDEENHDDGCETEDDDDDDDDGPGPASDEEDE 993

Query: 1016 VHVRQKVTEVDPLEEASFDQELKAVLQ--ESMEQRRLELRGRPTLNMMIPMNVFEGSAKD 1073
            VHVRQKVTEVDPLEEA+FDQELKAV+Q  ESMEQRR ELRGRPTLNMMIPMNVFEGSAKD
Sbjct: 994  VHVRQKVTEVDPLEEANFDQELKAVVQARESMEQRRQELRGRPTLNMMIPMNVFEGSAKD 1053

Query: 1074 HHGRGTGGESGDEALDEDTDGNKEVQVKVLVKRGNKQQTKQMYIPRNSSLVQSTXXXXXX 1133
            HHGRG GGESGDEALDEDT GNKEVQV+VLVKRGNKQQTKQM+IPRNSSLVQST      
Sbjct: 1054 HHGRGVGGESGDEALDEDTGGNKEVQVRVLVKRGNKQQTKQMFIPRNSSLVQSTKQKEAA 1113

Query: 1134 XXXXXXDIKRLVLEYNDREEEELNGLGTQPTNWMQ 1168
                  DIKRLVLEYNDREEEE NGLGTQPTNWMQ
Sbjct: 1114 ELQEKEDIKRLVLEYNDREEEEHNGLGTQPTNWMQ 1148


>Glyma09g11480.1 
          Length = 1190

 Score = 1882 bits (4875), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 950/1176 (80%), Positives = 995/1176 (84%), Gaps = 35/1176 (2%)

Query: 1    MDQHEDECRTGGESNSKQDDEEAVAHLEEIKKSIEAKIALRQSNLNPDRPDSGFLRTLDS 60
            MD  EDE      SNSKQDDEEAVA LEEIKKSIEAK+ALRQSNLNP+RPDSGFLRTLDS
Sbjct: 1    MDHQEDE------SNSKQDDEEAVARLEEIKKSIEAKLALRQSNLNPERPDSGFLRTLDS 54

Query: 61   SIKRNTAVIKKLKQINEELREALMDELRTVNMSKFVSEAVAAICDAKLRSSDIQAAVQIC 120
            SIKRNTAVIKKLKQINEE REALMDELR+VN+SKFVSEAVAAICDAKLRSSDIQAAVQIC
Sbjct: 55   SIKRNTAVIKKLKQINEEQREALMDELRSVNLSKFVSEAVAAICDAKLRSSDIQAAVQIC 114

Query: 121  SLLHQRYKDFAPSLIQGLLKIFSPGKPGDESDTDKNXXXXXXXXXXXXXXXXFFVGVIED 180
            SLLHQRYKDFAPSL+QGLLK+FSPGKPGDESDTD+N                FFVGVIED
Sbjct: 115  SLLHQRYKDFAPSLVQGLLKVFSPGKPGDESDTDRNLKAMKKRSSLKLLLELFFVGVIED 174

Query: 181  GAIFITIIKDLTSVEQLKDRDATQTSLTLLSSFARQGRIFLGLSVNGPEIHEEFFKGLAI 240
            G IFI IIKDLTS EQLKDRDA QTSLTLLSSFARQGRIFLGLSV+GPEIHEEFFKGL I
Sbjct: 175  GGIFINIIKDLTSGEQLKDRDAAQTSLTLLSSFARQGRIFLGLSVSGPEIHEEFFKGLNI 234

Query: 241  TADQKKVLRKACYAFYDAAAELLQSEHSSLRVMEHENSKILNAKGELSEENVASYEKLRK 300
            TADQKKVLRKACY+FYDAAAELLQSEHSSLR+MEHENSKILNAKGELS+EN+ASYEKLRK
Sbjct: 235  TADQKKVLRKACYSFYDAAAELLQSEHSSLRLMEHENSKILNAKGELSDENIASYEKLRK 294

Query: 301  SYDHLYRNVSSLAEALDMQPPVMPEDGHTTRVTSGEEAISSASGKDSSVVEPIWDDEDTR 360
            SYDHLYRN+SSLAEALDMQPPVMPEDGHTTRVTSGE+ ISSASGKDSSVVEPIWDDED R
Sbjct: 295  SYDHLYRNISSLAEALDMQPPVMPEDGHTTRVTSGEDGISSASGKDSSVVEPIWDDEDAR 354

Query: 361  AFYECLPDLRAFVPAVLLGETEPKSNEQSVKSQDQSTEILPESDKGQ-TTRESGEVSTDP 419
             FYECLPDLRAFVPAVLLGETEPKS+EQS K+QDQ+TEILPESDKGQ TT ESGEVST+ 
Sbjct: 355  TFYECLPDLRAFVPAVLLGETEPKSSEQSAKNQDQTTEILPESDKGQQTTHESGEVSTES 414

Query: 420  SALPEGESIQGVKGKEEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 479
            SALPE ES + VK KEE+                                          
Sbjct: 415  SALPEAESTERVKDKEEKDKSKELDREKEKEKENDKKGENEKDK---------------- 458

Query: 480  XXXXLRSLEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKKLVRALFSVPRTSL 539
                LRS+EGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKS+RKKLVRALF+VPRTSL
Sbjct: 459  ----LRSVEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSSRKKLVRALFNVPRTSL 514

Query: 540  ELLPYYSRMVATLSTCMKDVSSILLQMLEEEFNFLINKKDQMNIETKIKNIRFIGELCKF 599
            ELLPYYSRMVATLSTCMKDVSSILLQMLEEEFNFLINKKDQMNIETKI+NIRFIGELCKF
Sbjct: 515  ELLPYYSRMVATLSTCMKDVSSILLQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKF 574

Query: 600  KIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETSIRMANMLEILMRLKN 659
            KI+P GLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPET+IRMANMLEILMRLKN
Sbjct: 575  KISPPGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETTIRMANMLEILMRLKN 634

Query: 660  VKNLDPRHSTLVENAYYLCKPPERSARVAKVRPPLHQYIRKLLFSDLDKSTIEHVLRQLR 719
            VKNLDPRHSTLVENAYYLCKPPERSARVAKVRPPLHQYIRKLLFSDLDKSTIEHVLRQLR
Sbjct: 635  VKNLDPRHSTLVENAYYLCKPPERSARVAKVRPPLHQYIRKLLFSDLDKSTIEHVLRQLR 694

Query: 720  KLPWSECEPYLLKCFMKVYKGKYGQIHLIASLAAGLSRYHDEFAVAIVDEVLEEIRIGLE 779
            KLPW+ECEPYLLKCFMKVYKGKYGQIHLIASLAAGLSRYHDEFAVAIVDEVLEEIR+GLE
Sbjct: 695  KLPWNECEPYLLKCFMKVYKGKYGQIHLIASLAAGLSRYHDEFAVAIVDEVLEEIRVGLE 754

Query: 780  LNDYGMQQRRVAYMRFLGELYNYKHADSSVIFETLYLILVYGHGTPEQDVLDPPEDFFRI 839
            LNDYGMQQRR+AYMRFLGELYNY+H DSSVIFETLYLIL+YGHGT EQDVLDPPED FRI
Sbjct: 755  LNDYGMQQRRIAYMRFLGELYNYEHVDSSVIFETLYLILIYGHGTQEQDVLDPPEDCFRI 814

Query: 840  RLIITLLETCGHYFDHGSSKRKLDRFLIHFQRYILSKGALPLDVEFDLQDLFVDLRPNMV 899
            RLIITLLETCGHYFD GSSKRKLDRFLIHFQRYILSKGALPLD+EFDLQDLFVDLRPNMV
Sbjct: 815  RLIITLLETCGHYFDRGSSKRKLDRFLIHFQRYILSKGALPLDIEFDLQDLFVDLRPNMV 874

Query: 900  RYSSIXXXXXXXXXXXXHDRIVSADKASGEKQSEKPP---RRTTSSMVVGNGQSIDNGAE 956
            R++SI            HDRIV ADKAS EK S+      R T+++ VVGNGQSIDNG E
Sbjct: 875  RHNSIEEVNAALVELEEHDRIVFADKASSEKHSDTEKSLSRTTSTTTVVGNGQSIDNGME 934

Query: 957  DNGVQDDVNDGEADSGSDVIXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXX 1014
            +NGVQDD ND E DSGSD I                                        
Sbjct: 935  ENGVQDD-NDSETDSGSDTIDVEGHDDEELDEENHDDGCETEDDDDDDDDGPGPASDEED 993

Query: 1015 XVHVRQKVTEVDPLEEASFDQELKAVLQ--ESMEQRRLELRGRPTLNMMIPMNVFEGSAK 1072
             VHVRQK+T+VDPLEEA+FDQELKAV+Q  ESMEQRR ELRGRPTLNMMIPMNVFEGSAK
Sbjct: 994  EVHVRQKMTQVDPLEEANFDQELKAVVQARESMEQRRQELRGRPTLNMMIPMNVFEGSAK 1053

Query: 1073 DHHGRGTGGESGDEALDEDTDGNKEVQVKVLVKRGNKQQTKQMYIPRNSSLVQSTXXXXX 1132
            DHHGRG GGESGDE LDEDT GNKEVQV+VLVKRGNKQQTKQM+IPRNSSLVQST     
Sbjct: 1054 DHHGRGVGGESGDEPLDEDTGGNKEVQVRVLVKRGNKQQTKQMFIPRNSSLVQSTKQKEA 1113

Query: 1133 XXXXXXXDIKRLVLEYNDREEEELNGLGTQPTNWMQ 1168
                   DIKRLVLEYNDREEEELNGLGTQ TNWMQ
Sbjct: 1114 AELQEKEDIKRLVLEYNDREEEELNGLGTQATNWMQ 1149