Miyakogusa Predicted Gene

Lj6g3v1093420.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1093420.1 tr|Q0WV10|Q0WV10_ARATH Sucrose transporter
OS=Arabidopsis thaliana GN=At2g02860 PE=2 SV=1,84,0.0007,
,CUFF.59071.1
         (39 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g40980.1                                                        48   3e-06
Glyma18g15950.1                                                        48   3e-06

>Glyma08g40980.1 
          Length = 602

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/25 (84%), Positives = 23/25 (92%)

Query: 7   LQTLGIAYAFSSFIWLCGPFTGLVV 31
           +QTLGI +AFSSFIWLCGP TGLVV
Sbjct: 88  IQTLGIGHAFSSFIWLCGPITGLVV 112


>Glyma18g15950.1 
          Length = 620

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/25 (84%), Positives = 23/25 (92%)

Query: 7   LQTLGIAYAFSSFIWLCGPFTGLVV 31
           +QTLGI +AFSSFIWLCGP TGLVV
Sbjct: 86  IQTLGIGHAFSSFIWLCGPITGLVV 110