Miyakogusa Predicted Gene

Lj6g3v1078470.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1078470.1 Non Chatacterized Hit- tr|I1L2C9|I1L2C9_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,69.65,0,Fip1,Pre-mRNA
polyadenylation factor Fip1; seg,NULL,CUFF.59108.1
         (1322 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g13570.1                                                      1526   0.0  
Glyma15g33980.1                                                       765   0.0  
Glyma09g04020.1                                                        60   1e-08

>Glyma09g13570.1 
          Length = 1282

 Score = 1526 bits (3951), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 859/1360 (63%), Positives = 965/1360 (70%), Gaps = 116/1360 (8%)

Query: 1    MEDDDEFGDLYTDVLRPFAISDHH----------SPQPTTTIDLN--------QIPSAAP 42
            MEDDDEFGDLYTDVLRPFA S             SP P + +DLN        QIP  AP
Sbjct: 1    MEDDDEFGDLYTDVLRPFASSSPSSSSAQQLHQLSPAPPS-LDLNLNPNPDAAQIPCDAP 59

Query: 43   HDTPPPSTNQNQPGSPEIAPELPPRVSPQPDPVXXXXXXXXXXXXXXXXXXXIDPMDRDV 102
            H   P  TN      P   P   P++ P  +P+                   +DPMDR+V
Sbjct: 60   HTYSPAPTNPLPEPDPREPPPESPKI-PDAEPLPDSNLVAAVVAG-------VDPMDREV 111

Query: 103  KFDIEEDDGGGAAL-----EPVIPGLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQI 157
            KFDIEEDD  G        E VIPGLS                              L+I
Sbjct: 112  KFDIEEDDDDGGCGGDVVGETVIPGLSGEAAAAVPPEGEGDDWDSDSEDD-------LKI 164

Query: 158  VLNDDNRMAMER--XXXXXXXXXXXXXXLVIVAGGDPSQGLEEQDWGNNATLAA-DGEGK 214
            VLN++N MAMER                LVIVAGGD +QG+EE +WG NA LAA DG+ K
Sbjct: 165  VLNENNHMAMERGGVADGDEEEEDGDEELVIVAGGDLNQGVEEPEWGENAALAAGDGDRK 224

Query: 215  DXXXXXXXXXXXXXXXXXXXPKIGYGGHGYHPFHSQFKYVRPGAAPIPGATTSSLGGPPG 274
            D                   PKIGY  HGYHPFHS FKYVRPGAA +PGA  S+ GGPPG
Sbjct: 225  DAAGELAKVGGAAVP-----PKIGYSNHGYHPFHSPFKYVRPGAALMPGAAASAPGGPPG 279

Query: 275  QIRPLAIVAGRGRGEWRPPGIKGAAGR------GPGLPXXXXXXXXXXXXXXLEFTLPSH 328
            QIRPLA +AGRGRGEWRPPGIKG A        GPGLP              LEFTLPSH
Sbjct: 280  QIRPLANMAGRGRGEWRPPGIKGGAAMQKGFHAGPGLPGWGSSAAGRGFGGGLEFTLPSH 339

Query: 329  KTIFEVDIENFEEKPWKYPNVDVSDFFNFGLNEDSWKDYCKQLEQLRLESTMQSKIRVYE 388
            KTIF+V+IENFEEKPWKYPNVD+SDFFNFGLNE+SWKDYCKQLEQLRLESTMQSKIRVYE
Sbjct: 340  KTIFDVEIENFEEKPWKYPNVDISDFFNFGLNEESWKDYCKQLEQLRLESTMQSKIRVYE 399

Query: 389  SGRTEQEYDPDLPPELAAATGIHDVPVENASFVKSDVGQSDVMKGSG--RVRLPLPTGRA 446
            SGRTEQEYDPDLPPELAAATGIHDVP E+ + +KSDVGQSDVMKGSG  RVR PLPTGRA
Sbjct: 400  SGRTEQEYDPDLPPELAAATGIHDVPGEHTNSLKSDVGQSDVMKGSGTGRVRPPLPTGRA 459

Query: 447  IQVEGGYGERLPSIDTRPPRIRDSDAIIEIVLQXXXXXXXXXXXXVQDQPVGGEPMKEDF 506
            IQVEGGYG+RLPSIDTRPPRIRDSDAIIEIVLQ             QD P  G+P +EDF
Sbjct: 460  IQVEGGYGDRLPSIDTRPPRIRDSDAIIEIVLQDTEDDESSAGI-AQDPPESGDPHREDF 518

Query: 507  REDHVARDEIPRLQPEYFDGFPQDYDSRKKELAGRRMPFMKSSPANLPDEDEKMFFPPEE 566
            REDHVA DEIPRL+P+YFDGFPQDY+ RKKE+AGRRMPF+ S  AN+P+ DEK+FFP EE
Sbjct: 519  REDHVAGDEIPRLEPKYFDGFPQDYNGRKKEIAGRRMPFINSCAANMPNGDEKLFFPQEE 578

Query: 567  PTEYSGSRGQNPRSHSGNFXXXXXXXXXXXXXXXXXP-ISPIRKLTTDDIKKAESLESME 625
            P EYSGSRGQN R++ GNF                 P I PI++L TD+ +K ES ESME
Sbjct: 579  PIEYSGSRGQNRRNYGGNFSSSHDERQMQRRVRGQSPPIIPIQELATDNSQKEESAESME 638

Query: 626  GRHSRLLASPFRKDTRDSSVDDKDTELEDTGTANGSSRLEKEEMDLNAVDKVDTLEDGIE 685
            GRH    +SP  KD  +SSV+ KD ELEDT TA+GSSRLEKEE     VD+VDTLEDG+ 
Sbjct: 639  GRHR---SSPAVKDVGESSVEYKDIELEDTETADGSSRLEKEE----TVDRVDTLEDGVA 691

Query: 686  KKQKLTSEVEQPLLDEVDDWEDSKTARSSDNSKARSAGSRDNQKQRESLDEEVVQDPRSA 745
            K+QK                 DSK A+SSDNSKARSA SRDNQK++E  +EEVVQDP+SA
Sbjct: 692  KRQK-----------------DSKAAKSSDNSKARSASSRDNQKRQEGFEEEVVQDPQSA 734

Query: 746  QVDSIRQPPDENEQGFHRRERDGKQEPERNRMVLKGREGSYPYKDRHRSS---VHANTDG 802
             + SIRQ PDE E GF++RE D KQEPERNRM+LKGRE SYPYKDRH SS   +HANTDG
Sbjct: 735  HLGSIRQHPDEIEPGFYKREHDAKQEPERNRMMLKGRERSYPYKDRHPSSAPQLHANTDG 794

Query: 803  FDRQKDRDNSDMDWAGRDDDLFSRRVRNDEPRKRDRAKVRENERNNKEDSLHSRKQLDNG 862
            FD QK+RDNS+MDWA RDDDL++RRVRNDEPRKRDRAKVRENERN+KEDSLHSRKQLDNG
Sbjct: 795  FDGQKERDNSEMDWARRDDDLYNRRVRNDEPRKRDRAKVRENERNDKEDSLHSRKQLDNG 854

Query: 863  SYRVPYDKDIGPRDSRHRERDEGLRIRYEAVDDYHGKRRRDEEYLRREHIDKEEILHGYR 922
            SYRV Y+KD+G                YEAV+DY GKRR+DEEYLRREHIDKEE+LHGYR
Sbjct: 855  SYRVLYEKDVG----------------YEAVEDYRGKRRKDEEYLRREHIDKEEVLHGYR 898

Query: 923  ENASXXXXXXDGLLDPRKRDELQRSRDYPDDQYAGRLKDDTWLLXXXXXXXXXXXXWHRM 982
            ENAS      D +LDPRKRD+LQR+RD PDDQYA R KDD W+             WHRM
Sbjct: 899  ENASRRRRERDEVLDPRKRDDLQRARDNPDDQYATRQKDDAWVPRERGDRQRDREEWHRM 958

Query: 983  KQPHEEHLPKREREEGRASLRSGRGSDEKAWVGHVSAKDEQKFSEKEYQGREVVRHNDQL 1042
            KQ HEEHLPKREREEGR+S+RSGRG+             E K SEKEYQ RE +R NDQL
Sbjct: 959  KQSHEEHLPKREREEGRSSVRSGRGA-------------EHKLSEKEYQSREAMRQNDQL 1005

Query: 1043 KRRDRIQDESPHHKGRDDAYTRGNQYATDEKXXXXXXXXXXGDHVANASDNQRAHERKHK 1102
            KRRDRIQDESPHHKGRDDA  RGNQY T+E+           D VAN SDNQ+    KH+
Sbjct: 1006 KRRDRIQDESPHHKGRDDASARGNQYTTEERRSRQERSSSRSDRVANFSDNQKV---KHR 1062

Query: 1103 EGSRKSKERDVSDLNSLGLAKKSQEIQSGSSNEKGLKASGNEDRAQREIPGHRMSRKHQD 1162
            EGSRKSKERDVSDLNSLGL+K+SQE Q G +NEKGLK SG+E+RA+ EIPGHR+SRK ++
Sbjct: 1063 EGSRKSKERDVSDLNSLGLSKRSQENQIGPTNEKGLKGSGDEERAEHEIPGHRLSRKQRE 1122

Query: 1163 GMSSDDEQHDSRRGRSKLERWTSHKERDFSIGKSSSSLKFKVPEKDNDDGSSEAGKPVDE 1222
             MSSDDEQ DSRRGRSKLERWTSHKERDFS+ KSSSSLK+K  +KDN+DGSSEAGKP DE
Sbjct: 1123 DMSSDDEQQDSRRGRSKLERWTSHKERDFSVNKSSSSLKYKDIDKDNNDGSSEAGKPADE 1182

Query: 1223 SVKTVDVDNQHLSSAEAKESADLESRDADRKDSGDQRLDTVERLKKRSERFKLPMPSEKE 1282
              KTVDVDNQHL  AEA++SAD+E+RDAD K+ GD+ LDTVERLKKRSERFKLPMPSEKE
Sbjct: 1183 PAKTVDVDNQHLLLAEARDSADMENRDADTKELGDRHLDTVERLKKRSERFKLPMPSEKE 1242

Query: 1283 AIVIKKLESEPLPSATQSETPVETEVKQERPARKRRWISS 1322
             +VIKKLESEPLPSA      V++EVKQERPARKRRW+++
Sbjct: 1243 TLVIKKLESEPLPSAKSENPVVDSEVKQERPARKRRWVTN 1282


>Glyma15g33980.1 
          Length = 1137

 Score =  765 bits (1976), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/778 (57%), Positives = 495/778 (63%), Gaps = 94/778 (12%)

Query: 1   MEDDDEFGDLYTDVLRPFAISDH-------HSPQPTT-TIDLN------QIPSAAPHDTP 46
           MEDDDEFGDLYTDVLRPFA S         H P P   ++DL+      QIP  APH   
Sbjct: 1   MEDDDEFGDLYTDVLRPFASSPSLSSAPQPHQPSPAPPSLDLSPNPDDAQIPCDAPHANS 60

Query: 47  PPSTNQNQPGSPEIAPELPPRVSPQPDPVXXXXXXXXXXXXXXXXXXXIDPMDRDVKFDI 106
           P  TN      P  AP  PP++ P   P                    +DPMDR+VKFDI
Sbjct: 61  PAPTNPLPEPDPREAPTEPPKI-PDAKPTTDSNLAAAAVA--------VDPMDREVKFDI 111

Query: 107 EEDDGGGAALEPVIPGLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQIVLNDDNRMA 166
           EED+      EPVIPGL+                              L+IVLN++N MA
Sbjct: 112 EEDEE--DGGEPVIPGLTGELAAPTEGEGDDWDSDSEDD---------LKIVLNENNHMA 160

Query: 167 MER--XXXXXXXXXXXXXXLVIVAGGDPSQGLEEQDWGNNATLAA-DGEGKDXXXXXXXX 223
           MER                LVIVAGGDP+QG EE +WG NATLAA DGE KD        
Sbjct: 161 MERGGMADGDEEEEDGDEELVIVAGGDPNQGAEEPEWGENATLAAGDGERKDAAGELAKA 220

Query: 224 XXXXXXXXXXXPKIGYGGHGYHPFHSQFKYVRPGAAPIPGATTSSLGGPPGQIRPLAIVA 283
                      PKIGY   GYHPFHS FKYVRPGAA +PGA  S+ GGPPGQIRPLA +A
Sbjct: 221 GGAAVP-----PKIGYSNQGYHPFHSPFKYVRPGAALMPGAAASAPGGPPGQIRPLANMA 275

Query: 284 GRGRGEWRPPGIKGAAGR------GPGLPXXXXXXXXXXXXXXLEFTLPSHKTIFEVDIE 337
           GRGRG+WRPPGIKG A        GPGLP              LEFTLPSHKTIF+VDIE
Sbjct: 276 GRGRGDWRPPGIKGGAAMQKGFHAGPGLPGWGNGAAGRGFGGGLEFTLPSHKTIFDVDIE 335

Query: 338 NFEEKPWKYPNVDVSDFFNFGLNEDSWKDYCKQLEQLRLESTMQSKIRVYESGRTEQEYD 397
           NFEEKPW+YPN+D SDFFNFGLNE+SWKDYCKQLEQLRLESTMQSKIRVYESGRTEQEYD
Sbjct: 336 NFEEKPWQYPNIDTSDFFNFGLNEESWKDYCKQLEQLRLESTMQSKIRVYESGRTEQEYD 395

Query: 398 PDLPPELAAATGIHDVPVENASFVKSDVGQSDVMKGS--GRVRLPLPTGRAIQVEGGYGE 455
           PDLPPELAAATGIHD PVEN + +KSDVGQSDVMKGS  GRVR PLPTGRAIQVEGGYG+
Sbjct: 396 PDLPPELAAATGIHDSPVENTNSLKSDVGQSDVMKGSGTGRVRPPLPTGRAIQVEGGYGD 455

Query: 456 RLPSIDTRPPRIRDSDAIIEIVLQXXXXXXXXXXXXVQDQPVGGEPMKEDFREDHVARDE 515
           RLPSIDTRPPRIRDSDAIIEIVLQ             QD P GGEP +EDFREDH     
Sbjct: 456 RLPSIDTRPPRIRDSDAIIEIVLQ-DTEDDQSSAGVAQDPPEGGEPHREDFREDH----- 509

Query: 516 IPRLQPEYFDGFPQDYDSRKKELAGRRMPFMKSSPANLPDEDEKMFFPPEEPTEYSGSRG 575
                               KE+AGRRM F+ SS AN+P+ DEK+FFP EEP EYSGS+G
Sbjct: 510 --------------------KEIAGRRMSFINSSAANMPNGDEKLFFPQEEPIEYSGSKG 549

Query: 576 QNPRSHSGNFXXXXXXXXXXXXXXXXXP-ISPIRKLTTDDIKKAESLESMEGRHSRLLAS 634
           QN RS+ GN                  P I+PI++L TD+  K ES ESMEGRH    +S
Sbjct: 550 QNRRSYGGNCSSSHDERQMQRRVGGQSPSITPIQELATDNSLKEESAESMEGRHR---SS 606

Query: 635 PFRKDTRDSSVDDKDTELEDTGTANGSSRLEKEEMDLNAVDKVDTLEDGIEKKQKLTSEV 694
           P  KD R+SSV++KD ELEDTGTA+GSSRLEKEE               ++K+QKLTS V
Sbjct: 607 PAVKDIRESSVEEKDIELEDTGTADGSSRLEKEET--------------VDKRQKLTSRV 652

Query: 695 EQPLLDEVDDWEDSKTARSSDNSKARSAGSRDNQKQRESLDEEVVQDPRSAQVDSIRQ 752
           E PLLDEVDDWEDSK A+SSDNSKARSA SRDNQK+RE  +EEVVQDPRSAQ+   RQ
Sbjct: 653 EPPLLDEVDDWEDSKAAKSSDNSKARSASSRDNQKRREGFEEEVVQDPRSAQLRDSRQ 710



 Score =  583 bits (1504), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 312/449 (69%), Positives = 355/449 (79%), Gaps = 18/449 (4%)

Query: 875  RDSRHRERDEGLRIRYEAVDDYHGKRRRDEEYLRREHIDKEEILHGYRENASXXXXXX-D 933
            RDSR RERDEGLRIRYEAV+DY GK+R+DEEYLRREHIDKEE+LHGYRE AS       D
Sbjct: 706  RDSRQRERDEGLRIRYEAVEDYRGKKRKDEEYLRREHIDKEEVLHGYREIASSRRRRERD 765

Query: 934  GLLDPRKRDELQRSRDYPDDQYAGRLKDDTWLLXXXXXXXXXXXXWHRMKQPHEEHLPKR 993
             +LDPRKRD+LQR+RD PDDQYA R KD+ W+L            W RMKQ HEEHLPKR
Sbjct: 766  EVLDPRKRDDLQRARDNPDDQYATRQKDEAWVLKERGDRQRDREEWCRMKQSHEEHLPKR 825

Query: 994  EREEGRASLRSGRGSDEKAWVGHVSAKDEQKFSEKEYQGREVVRHNDQLKRRDRIQDESP 1053
            ERE GR+S+RSGRG+             E K SEKEYQ RE +RHNDQLKRRDRIQDESP
Sbjct: 826  ERE-GRSSVRSGRGA-------------EHKLSEKEYQSREAMRHNDQLKRRDRIQDESP 871

Query: 1054 HHKGRDDAYTRGNQYATDEKXXXXXXXXXXGDHVANASDNQRAHERKHKEGSRKSKERDV 1113
            HHKGRDDA  RGNQY T+E+           D VAN SDNQ+    KH+EGSRKSKERDV
Sbjct: 872  HHKGRDDASARGNQYTTEERRSRLERSSSRSDRVANVSDNQKV---KHREGSRKSKERDV 928

Query: 1114 SDLNSLGLAKKSQEIQSGSSNEKGLKASGNEDRAQREIPGHRMSRKHQDGMSSDDEQHDS 1173
            SDLNSLGL+K+SQE QSG +NEKGLK SG+E+RA+ EI GHR+SRK ++ MSSDDEQ DS
Sbjct: 929  SDLNSLGLSKRSQENQSGPTNEKGLKGSGDEERAEHEISGHRLSRKQREDMSSDDEQQDS 988

Query: 1174 RRGRSKLERWTSHKERDFSIGKSSSSLKFKVPEKDNDDGSSEAGKPVDESVKTVDVDNQH 1233
            RRGRSKLERWTSHKERDF++ KSSSSLKFK  +KDN+D SSEAGKP  E  KTVD DNQH
Sbjct: 989  RRGRSKLERWTSHKERDFNVNKSSSSLKFKDIDKDNNDASSEAGKPAYEPAKTVDADNQH 1048

Query: 1234 LSSAEAKESADLESRDADRKDSGDQRLDTVERLKKRSERFKLPMPSEKEAIVIKKLESEP 1293
            + S EA++SAD+E+RDAD K+SGD+ LDTVERLKKRSERFKLPMPSEKEA+VIKKLESEP
Sbjct: 1049 ILSVEARDSADMENRDADTKESGDRHLDTVERLKKRSERFKLPMPSEKEALVIKKLESEP 1108

Query: 1294 LPSATQSETPVETEVKQERPARKRRWISS 1322
            LPSA      V++EVKQERPARKRRW+++
Sbjct: 1109 LPSAKSENPVVDSEVKQERPARKRRWVTN 1137


>Glyma09g04020.1 
          Length = 237

 Score = 60.5 bits (145), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/51 (49%), Positives = 34/51 (66%)

Query: 325 LPSHKTIFEVDIENFEEKPWKYPNVDVSDFFNFGLNEDSWKDYCKQLEQLR 375
           LP +  IF+V+ +   EK WK P VD++D+FNFG NE +WK YC  L + R
Sbjct: 153 LPWYWGIFDVNTDTLTEKLWKVPGVDITDYFNFGFNESTWKLYCSSLPKGR 203