Miyakogusa Predicted Gene

Lj6g3v1078290.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1078290.1 tr|Q7FAP0|Q7FAP0_ORYSJ OSJNBb0016D16.5 protein
OS=Oryza sativa subsp. japonica GN=OSJNBb0016D16.5
PE,32.99,2e-17,EamA,Drug/metabolite transporter; Multidrug resistance
efflux transporter EmrE,NULL; seg,NULL; SUBFA,CUFF.58968.1
         (237 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g23920.1                                                       259   2e-69
Glyma06g27240.1                                                       237   7e-63
Glyma06g27240.2                                                       236   2e-62
Glyma18g48100.1                                                        68   7e-12
Glyma04g10550.1                                                        68   1e-11

>Glyma12g23920.1 
          Length = 363

 Score =  259 bits (661), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 139/237 (58%), Positives = 156/237 (65%), Gaps = 4/237 (1%)

Query: 1   MLSVPLLQXXXXXXXXXXXXXXXSDSLSGQISKFVVMLTATYHSKPIPYWILLVLGIIAM 60
           M S+PL+Q               SDSL  QISKF  MLT  +  KPI YWILLVL I+AM
Sbjct: 1   MTSLPLIQPESMEAEPSIP----SDSLRAQISKFSTMLTEAHKRKPIHYWILLVLSILAM 56

Query: 61  LVAFPASSILSRVYYANGGQSKWIISWVAVAGWPLVALILFPAYCINXXXXXXXXXXXGL 120
           LVAFPASSILSRVYY NGGQSKWIISWVAVAGWPL ALILFP Y I+            L
Sbjct: 57  LVAFPASSILSRVYYDNGGQSKWIISWVAVAGWPLTALILFPVYFISKTFPTPLNLKLSL 116

Query: 121 AYVVLGFLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYLLVKNKINAAMINAIF 180
           +Y+VLGFLS                                 GY LVKNK+NA+++N++F
Sbjct: 117 SYIVLGFLSAADNLMYAYAYAYLPASTASLVASSSLVFSALFGYFLVKNKVNASIVNSVF 176

Query: 181 VITAGLTIIALDSGSDRYDNVSNKEYIMGFIWDVLGSALHGLIFALSELVFVKLLGR 237
           VITA LTIIALDS SDRY ++S+ EYIMGF+WDVLGSA HGLIFALSELVFVKLLGR
Sbjct: 177 VITAALTIIALDSSSDRYPSISDSEYIMGFVWDVLGSAFHGLIFALSELVFVKLLGR 233


>Glyma06g27240.1 
          Length = 361

 Score =  237 bits (605), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 138/237 (58%), Positives = 153/237 (64%), Gaps = 4/237 (1%)

Query: 1   MLSVPLLQXXXXXXXXXXXXXXXSDSLSGQISKFVVMLTATYHSKPIPYWILLVLGIIAM 60
           M S+PLLQ               SDSL  QISKF  MLT  Y  K I YWILL L I+AM
Sbjct: 1   MTSLPLLQPEIMEAEPSIP----SDSLRSQISKFSTMLTKAYKRKSIHYWILLALSILAM 56

Query: 61  LVAFPASSILSRVYYANGGQSKWIISWVAVAGWPLVALILFPAYCINXXXXXXXXXXXGL 120
           LVAFPASSILSRVYY NGGQSKWIISWVAVAGWPL ALILFP Y I+            L
Sbjct: 57  LVAFPASSILSRVYYDNGGQSKWIISWVAVAGWPLTALILFPVYFISKTFPTSLNLKLSL 116

Query: 121 AYVVLGFLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYLLVKNKINAAMINAIF 180
           +Y+VLGFLS                                 GY LVKNK+NA+++N++F
Sbjct: 117 SYIVLGFLSAADNLMYAYAYAYLPASTASLVASSSLVFSALFGYFLVKNKVNASIVNSVF 176

Query: 181 VITAGLTIIALDSGSDRYDNVSNKEYIMGFIWDVLGSALHGLIFALSELVFVKLLGR 237
           +IT  LTIIALDS SDRY N+S+ EYIMGF+WDVLGSALHGLIFALSELVFVKLL R
Sbjct: 177 IITIALTIIALDSSSDRYANISDSEYIMGFVWDVLGSALHGLIFALSELVFVKLLER 233


>Glyma06g27240.2 
          Length = 355

 Score =  236 bits (601), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 132/214 (61%), Positives = 146/214 (68%)

Query: 24  SDSLSGQISKFVVMLTATYHSKPIPYWILLVLGIIAMLVAFPASSILSRVYYANGGQSKW 83
           SDSL  QISKF  MLT  Y  K I YWILL L I+AMLVAFPASSILSRVYY NGGQSKW
Sbjct: 14  SDSLRSQISKFSTMLTKAYKRKSIHYWILLALSILAMLVAFPASSILSRVYYDNGGQSKW 73

Query: 84  IISWVAVAGWPLVALILFPAYCINXXXXXXXXXXXGLAYVVLGFLSXXXXXXXXXXXXXX 143
           IISWVAVAGWPL ALILFP Y I+            L+Y+VLGFLS              
Sbjct: 74  IISWVAVAGWPLTALILFPVYFISKTFPTSLNLKLSLSYIVLGFLSAADNLMYAYAYAYL 133

Query: 144 XXXXXXXXXXXXXXXXXXXGYLLVKNKINAAMINAIFVITAGLTIIALDSGSDRYDNVSN 203
                              GY LVKNK+NA+++N++F+IT  LTIIALDS SDRY N+S+
Sbjct: 134 PASTASLVASSSLVFSALFGYFLVKNKVNASIVNSVFIITIALTIIALDSSSDRYANISD 193

Query: 204 KEYIMGFIWDVLGSALHGLIFALSELVFVKLLGR 237
            EYIMGF+WDVLGSALHGLIFALSELVFVKLL R
Sbjct: 194 SEYIMGFVWDVLGSALHGLIFALSELVFVKLLER 227


>Glyma18g48100.1 
          Length = 359

 Score = 68.2 bits (165), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 84/195 (43%), Gaps = 2/195 (1%)

Query: 45  KPIPYWILLVLGIIAMLVAFPASSILSRVYYANGGQSKWIISWVAVAGWPLVALILF--P 102
           K   +W L+ L I  ++V   A+ IL R YY  GG SKW+ + V  A +P++ + LF  P
Sbjct: 20  KRWQWWCLVTLSIAFLIVGQSAAVILGRFYYDQGGNSKWMATLVQTAAFPILFIPLFTIP 79

Query: 103 AYCINXXXXXXXXXXXGLAYVVLGFLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 162
           +                L Y VLG L                                  
Sbjct: 80  SPPEASTSASSSIKIILLIYFVLGILIAADNMMYSTGLLYLSASTYSLISASQLAFNAVF 139

Query: 163 GYLLVKNKINAAMINAIFVITAGLTIIALDSGSDRYDNVSNKEYIMGFIWDVLGSALHGL 222
            Y +   K  A +IN+  V+T    ++A++  SD    +S  +YI+GF+  +  SA++ L
Sbjct: 140 SYFINSQKFTALIINSTVVLTLSAALLAVNEDSDEPSGLSMGKYIIGFLCTLGASAVYSL 199

Query: 223 IFALSELVFVKLLGR 237
           + +L +L F K+L +
Sbjct: 200 LLSLMQLTFEKVLKK 214


>Glyma04g10550.1 
          Length = 357

 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 74/172 (43%), Gaps = 9/172 (5%)

Query: 72  RVYYANGGQSKWIISWVAVAGWPLVALILFPAYCINXXXXXXXXXXXGL---------AY 122
           R+Y+ +GG   W+ S++  AG+PL+ L L  +Y               L         A 
Sbjct: 37  RLYFLHGGHRVWLSSFLETAGFPLMLLPLAVSYFRRRRTAAAGTSKPKLISMKPPLLAAS 96

Query: 123 VVLGFLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYLLVKNKINAAMINAIFVI 182
             +G L+                                  +LLV+ K  A  +NA+ ++
Sbjct: 97  AFIGILTGLDDYLYAYGVARLPVSTSALIIATQLGFTAFFAFLLVRQKFTAYSVNAVVLL 156

Query: 183 TAGLTIIALDSGSDRYDNVSNKEYIMGFIWDVLGSALHGLIFALSELVFVKL 234
           T G  ++AL +  DR    S KEY+MGF+  V+ +AL+G I  L ELV+ K+
Sbjct: 157 TVGAGVLALHTSGDRPPGESVKEYVMGFVMTVIAAALYGFILPLVELVYKKI 208