Miyakogusa Predicted Gene

Lj6g3v1078170.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1078170.1 Non Chatacterized Hit- tr|B8LZ38|B8LZ38_TALSN 26S
proteasome non-ATPase regulatory subunit Nas2, put,31.28,4e-19,PDZ
domain-like,PDZ domain; no description,NULL; SUBFAMILY NOT NAMED,NULL;
26S PROTEASOME NON-ATPASE,NODE_38753_length_776_cov_45.021908.path2.1
         (228 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g27880.1                                                       370   e-103
Glyma06g27660.1                                                       363   e-100
Glyma06g27660.2                                                       345   2e-95

>Glyma06g27880.1 
          Length = 230

 Score =  370 bits (950), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 183/230 (79%), Positives = 201/230 (87%), Gaps = 2/230 (0%)

Query: 1   MVATNVKAETMSLMDKRTSLEAEMNAIITHLTQPGAPGLSGNLIDSEGFPRSDIDIPAVX 60
           MVATNVKAETMSLMDKR++LEAEMN+II  L+QPGAPGLSGNL+DSEGFPRSDIDIP V 
Sbjct: 1   MVATNVKAETMSLMDKRSALEAEMNSIIARLSQPGAPGLSGNLVDSEGFPRSDIDIPVVR 60

Query: 61  XXXXXXXXXXNDHKEVTEKINQNIQILHSARLGKS--PFKNSGNDEGSDTQTSTAVDTLA 118
                     +DH EVTEKIN NIQILHSARLG    PFKNSGND+GSDTQ S+ +DT+A
Sbjct: 61  AERRRLAELRSDHNEVTEKINLNIQILHSARLGNRSLPFKNSGNDDGSDTQISSNMDTVA 120

Query: 119 STPGQNVLLRQNPNSMDVDVLVSRPFAMVDEIADASPAVEDGLQLGDQILKFGNVEAGDD 178
           STP QNVLL ++PNSMDV+VL+SRPFAMVDEIADASPAVEDGLQLGDQILKFGNVEAGD+
Sbjct: 121 STPSQNVLLIRSPNSMDVNVLISRPFAMVDEIADASPAVEDGLQLGDQILKFGNVEAGDN 180

Query: 179 LLQRLSSESQSNLDRPIPVVITRQGTVVNLTITPRTWQGRGLLGCHFRIL 228
           LLQRLSSE+QSNL   +PVVI RQGTV+NLTITPR WQGRGLLGCHFRIL
Sbjct: 181 LLQRLSSEAQSNLGCAVPVVIMRQGTVINLTITPRPWQGRGLLGCHFRIL 230


>Glyma06g27660.1 
          Length = 228

 Score =  363 bits (931), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 177/228 (77%), Positives = 197/228 (86%)

Query: 1   MVATNVKAETMSLMDKRTSLEAEMNAIITHLTQPGAPGLSGNLIDSEGFPRSDIDIPAVX 60
           MVATNVKAETMSLMDKR++LEAEMN+II  L+QPGAPGLSGNL+DSE FP SDID+P V 
Sbjct: 1   MVATNVKAETMSLMDKRSALEAEMNSIIARLSQPGAPGLSGNLVDSEDFPHSDIDVPVVR 60

Query: 61  XXXXXXXXXXNDHKEVTEKINQNIQILHSARLGKSPFKNSGNDEGSDTQTSTAVDTLAST 120
                     +DH EVT+KIN NIQILHSARLG   FKNSGND+GSDTQ S+ +DT+AST
Sbjct: 61  AERRRLAELRSDHNEVTDKINLNIQILHSARLGNRSFKNSGNDDGSDTQVSSNMDTVAST 120

Query: 121 PGQNVLLRQNPNSMDVDVLVSRPFAMVDEIADASPAVEDGLQLGDQILKFGNVEAGDDLL 180
           P QNVLL ++PNSMDV+VL+SRPFAMVDEIADASPAVEDGLQLGDQILKFGNVEAGD+LL
Sbjct: 121 PSQNVLLIRSPNSMDVNVLISRPFAMVDEIADASPAVEDGLQLGDQILKFGNVEAGDNLL 180

Query: 181 QRLSSESQSNLDRPIPVVITRQGTVVNLTITPRTWQGRGLLGCHFRIL 228
           QRLSSE+QSNL   +PVVI RQGTV+NLTITPR WQ RGLLGCHFRIL
Sbjct: 181 QRLSSEAQSNLGCAVPVVIMRQGTVINLTITPRPWQARGLLGCHFRIL 228


>Glyma06g27660.2 
          Length = 222

 Score =  345 bits (886), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 172/228 (75%), Positives = 191/228 (83%), Gaps = 6/228 (2%)

Query: 1   MVATNVKAETMSLMDKRTSLEAEMNAIITHLTQPGAPGLSGNLIDSEGFPRSDIDIPAVX 60
           MVATNVKAETMSLMDKR++LEAEMN+II  L+QPGAPGLSGNL+DSE FP SDID+P V 
Sbjct: 1   MVATNVKAETMSLMDKRSALEAEMNSIIARLSQPGAPGLSGNLVDSEDFPHSDIDVPVVR 60

Query: 61  XXXXXXXXXXNDHKEVTEKINQNIQILHSARLGKSPFKNSGNDEGSDTQTSTAVDTLAST 120
                     +DH EVT+KIN NIQILHSARLG   FKNS      DTQ S+ +DT+AST
Sbjct: 61  AERRRLAELRSDHNEVTDKINLNIQILHSARLGNRSFKNS------DTQVSSNMDTVAST 114

Query: 121 PGQNVLLRQNPNSMDVDVLVSRPFAMVDEIADASPAVEDGLQLGDQILKFGNVEAGDDLL 180
           P QNVLL ++PNSMDV+VL+SRPFAMVDEIADASPAVEDGLQLGDQILKFGNVEAGD+LL
Sbjct: 115 PSQNVLLIRSPNSMDVNVLISRPFAMVDEIADASPAVEDGLQLGDQILKFGNVEAGDNLL 174

Query: 181 QRLSSESQSNLDRPIPVVITRQGTVVNLTITPRTWQGRGLLGCHFRIL 228
           QRLSSE+QSNL   +PVVI RQGTV+NLTITPR WQ RGLLGCHFRIL
Sbjct: 175 QRLSSEAQSNLGCAVPVVIMRQGTVINLTITPRPWQARGLLGCHFRIL 222