Miyakogusa Predicted Gene

Lj6g3v1077630.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1077630.1 tr|B0CCD4|B0CCD4_ACAM1 Nucleoid-associated
protein AM1_1798 OS=Acaryochloris marina (strain MBIC
110,47,0.000000000000006,YbaB-like,YbaB-like DNA-binding protein; no
description,YbaB-like DNA-binding protein; YbaB_DNA_bd,Y,CUFF.58937.1
         (188 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g31120.1                                                       288   3e-78
Glyma12g25500.1                                                       282   1e-76
Glyma12g25500.2                                                       256   1e-68
Glyma06g31120.2                                                       213   7e-56

>Glyma06g31120.1 
          Length = 195

 Score =  288 bits (736), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 147/189 (77%), Positives = 158/189 (83%), Gaps = 5/189 (2%)

Query: 4   TVSLPNAIGLCPRNNHTLSSTSHCKLNSSSSIVDMKILPQSGSRKAGHGQRHLRLYGLFG 63
           T  L NA+G      H   S S CKL+SSS+IVDMKI  + G RK GHGQR  RLY LFG
Sbjct: 8   TGPLSNAVGFSDWKKHAPLSASLCKLSSSSNIVDMKI-SRCGCRKVGHGQRCFRLYALFG 66

Query: 64  GKKD----GDDSPNKGGILGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGEL 119
           GKKD     DD P+K GILGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGEL
Sbjct: 67  GKKDNNGKSDDVPSKAGILGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGEL 126

Query: 120 VKVTLSGNQQPLRTEITEAAMEFGSEKLSLLITEAYKDAHQKSVQAMKERMSDLAQSLGV 179
           VKVTLSGNQQP+RTEITEAAME GSEKLSLLITEAYKDAHQKSVQAMKERM+DLAQSLG+
Sbjct: 127 VKVTLSGNQQPVRTEITEAAMELGSEKLSLLITEAYKDAHQKSVQAMKERMNDLAQSLGM 186

Query: 180 PEGINEGMK 188
           P G++EG+K
Sbjct: 187 PPGLSEGLK 195


>Glyma12g25500.1 
          Length = 196

 Score =  282 bits (722), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 142/189 (75%), Positives = 158/189 (83%), Gaps = 4/189 (2%)

Query: 4   TVSLPNAIGLCPRNNHTLSSTSHCKLNSSSSIVDMKILPQSGSRKAGHGQRHLRLYGLFG 63
           T +L NA+G      H   S S CKL+ +S+IVDMKIL + G +K G+ QR  RLY LFG
Sbjct: 8   TGALSNAVGFRDWKKHVPLSASLCKLSFNSNIVDMKILSRCGCQKVGNDQRCFRLYALFG 67

Query: 64  GKKDG----DDSPNKGGILGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGEL 119
           GKKD     DD+P+K GILGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGEL
Sbjct: 68  GKKDNSGKSDDAPSKAGILGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGEL 127

Query: 120 VKVTLSGNQQPLRTEITEAAMEFGSEKLSLLITEAYKDAHQKSVQAMKERMSDLAQSLGV 179
           VKVTLSGNQQP+RTEITEAAME G EKLSLLITEAYKDAHQKSVQAMKERM+DLAQSLG+
Sbjct: 128 VKVTLSGNQQPVRTEITEAAMELGPEKLSLLITEAYKDAHQKSVQAMKERMNDLAQSLGM 187

Query: 180 PEGINEGMK 188
           P G++EG+K
Sbjct: 188 PPGLSEGLK 196


>Glyma12g25500.2 
          Length = 155

 Score =  256 bits (654), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 127/155 (81%), Positives = 138/155 (89%), Gaps = 4/155 (2%)

Query: 38  MKILPQSGSRKAGHGQRHLRLYGLFGGKKDG----DDSPNKGGILGNMQNLYETVKKAQM 93
           MKIL + G +K G+ QR  RLY LFGGKKD     DD+P+K GILGNMQNLYETVKKAQM
Sbjct: 1   MKILSRCGCQKVGNDQRCFRLYALFGGKKDNSGKSDDAPSKAGILGNMQNLYETVKKAQM 60

Query: 94  VVQVEAVRVQKELAAAEFDGYCEGELVKVTLSGNQQPLRTEITEAAMEFGSEKLSLLITE 153
           VVQVEAVRVQKELAAAEFDGYCEGELVKVTLSGNQQP+RTEITEAAME G EKLSLLITE
Sbjct: 61  VVQVEAVRVQKELAAAEFDGYCEGELVKVTLSGNQQPVRTEITEAAMELGPEKLSLLITE 120

Query: 154 AYKDAHQKSVQAMKERMSDLAQSLGVPEGINEGMK 188
           AYKDAHQKSVQAMKERM+DLAQSLG+P G++EG+K
Sbjct: 121 AYKDAHQKSVQAMKERMNDLAQSLGMPPGLSEGLK 155


>Glyma06g31120.2 
          Length = 162

 Score =  213 bits (543), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 110/146 (75%), Positives = 116/146 (79%), Gaps = 5/146 (3%)

Query: 4   TVSLPNAIGLCPRNNHTLSSTSHCKLNSSSSIVDMKILPQSGSRKAGHGQRHLRLYGLFG 63
           T  L NA+G      H   S S CKL+SSS+IVDMKI  + G RK GHGQR  RLY LFG
Sbjct: 8   TGPLSNAVGFSDWKKHAPLSASLCKLSSSSNIVDMKI-SRCGCRKVGHGQRCFRLYALFG 66

Query: 64  GKKDG----DDSPNKGGILGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGEL 119
           GKKD     DD P+K GILGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGEL
Sbjct: 67  GKKDNNGKSDDVPSKAGILGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGEL 126

Query: 120 VKVTLSGNQQPLRTEITEAAMEFGSE 145
           VKVTLSGNQQP+RTEITEAAME GSE
Sbjct: 127 VKVTLSGNQQPVRTEITEAAMELGSE 152