Miyakogusa Predicted Gene

Lj6g3v1077560.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1077560.2 tr|Q9FJM4|Q9FJM4_ARATH Emb|CAB79781.1
OS=Arabidopsis thaliana PE=4
SV=1,34.23,0.000000000000006,coiled-coil,NULL,CUFF.58929.2
         (255 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g08070.1                                                       287   6e-78
Glyma02g36620.1                                                       280   1e-75
Glyma17g08070.2                                                       214   5e-56

>Glyma17g08070.1 
          Length = 257

 Score =  287 bits (735), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 165/261 (63%), Positives = 198/261 (75%), Gaps = 10/261 (3%)

Query: 1   MKKMKGVVVSVDSP--VYEDQRTRLRHQSLLQDYEDLLEDTNSMRMKLQAAKQKRLTLSA 58
           MKKMKGVV S+D P  VY+DQR RLRHQSLLQDYEDL ++T +MR KLQA +QK+L L  
Sbjct: 1   MKKMKGVV-SLDPPYEVYQDQRARLRHQSLLQDYEDLHKETEAMRRKLQATRQKKLMLED 59

Query: 59  EVSFLRKRYKYLLKNPSPKLQPKQDISQPRKLKIQANLIPKGQKYNRKE-SMQPPVAPHW 117
           EV FLR+RY YLLK+P  K  PKQ + +P+KLK+QA +I KG+ Y+RKE +++P    H 
Sbjct: 60  EVRFLRQRYNYLLKHPILKPHPKQ-VVKPQKLKLQAPIISKGKNYSRKEPTLRPHPTSHL 118

Query: 118 NSNGRISNGAEINTLQKKAPMFDLNQNARSLSRKDPSFLSSAPP-LDLNHKDMSHSMKEP 176
           NSNGRISN AE   L+K   +FDLN NARS S+KD SF  SAPP  +LNHK+  HS KE 
Sbjct: 119 NSNGRISNVAEA-PLKKTGHLFDLNLNARSSSKKDASFNGSAPPVFELNHKERIHSSKEA 177

Query: 177 AKKSITPFFDLNQIAREEEELLV-TEPVRIEEPKRITQRDASEEQLNDIMLS-VCRNDGS 234
            KKS+TPFFDLNQI+REEEEL   +E +RIEEPKR TQR A++EQ +DI LS  CR+ G 
Sbjct: 178 TKKSVTPFFDLNQISREEEELQGNSEAMRIEEPKRSTQRVATDEQHSDIKLSAACRSVGD 237

Query: 235 GSSRTSVKRKISWQDQVALRV 255
           GS+R   KRKISWQDQVALRV
Sbjct: 238 GSNRAG-KRKISWQDQVALRV 257


>Glyma02g36620.1 
          Length = 259

 Score =  280 bits (716), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 162/262 (61%), Positives = 194/262 (74%), Gaps = 10/262 (3%)

Query: 1   MKKMKGVVVSVDSP--VYEDQRTRLRHQSLLQDYEDLLEDTNSMRMKLQAAKQKRLTLSA 58
           MKKMKGVV  ++ P  VY+DQR RLRHQSLLQDYEDL ++T +MR KLQA KQK+  L  
Sbjct: 1   MKKMKGVV-PMEPPYEVYQDQRARLRHQSLLQDYEDLHKETEAMRRKLQATKQKKFMLED 59

Query: 59  EVSFLRKRYKYLLKNPSPKLQPKQDISQPRKLKIQANLIPKGQKYNRKESMQPPVAP--H 116
           EV FLR+RY YLLK+P  K QPKQ + +P+KLKIQA +I KG+ YN+KE    P  P  H
Sbjct: 60  EVRFLRQRYNYLLKHPILKPQPKQQVVKPQKLKIQAPIISKGKNYNKKEPNLRPHHPASH 119

Query: 117 WNSNGRISNGAEINTLQKKAPMFDLNQNARSLSRKDPSFLSSAPP-LDLNHKDMSHSMKE 175
            NSNGRISN A++  L+K   +FDLN NARS S+KD S   S PP L+LNHK+  +S KE
Sbjct: 120 LNSNGRISNVADV-PLKKTGHLFDLNLNARSSSKKDASINISGPPVLNLNHKERINSSKE 178

Query: 176 PAKKSITPFFDLNQIAREEEELLV-TEPVRIEEPKRITQRDASEEQLNDIMLS-VCRNDG 233
             KKS+TPFFDLNQI+REEEEL   +EP+ IEEPKR +QR A++EQ  DI LS  CR+ G
Sbjct: 179 ATKKSVTPFFDLNQISREEEELQGNSEPMGIEEPKRSSQRVATDEQHGDIKLSAACRSVG 238

Query: 234 SGSSRTSVKRKISWQDQVALRV 255
            GS+R   KRKISWQDQVALRV
Sbjct: 239 DGSNRAG-KRKISWQDQVALRV 259


>Glyma17g08070.2 
          Length = 202

 Score =  214 bits (546), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 121/195 (62%), Positives = 147/195 (75%), Gaps = 7/195 (3%)

Query: 1   MKKMKGVVVSVDSP--VYEDQRTRLRHQSLLQDYEDLLEDTNSMRMKLQAAKQKRLTLSA 58
           MKKMKGVV S+D P  VY+DQR RLRHQSLLQDYEDL ++T +MR KLQA +QK+L L  
Sbjct: 1   MKKMKGVV-SLDPPYEVYQDQRARLRHQSLLQDYEDLHKETEAMRRKLQATRQKKLMLED 59

Query: 59  EVSFLRKRYKYLLKNPSPKLQPKQDISQPRKLKIQANLIPKGQKYNRKE-SMQPPVAPHW 117
           EV FLR+RY YLLK+P  K  PKQ + +P+KLK+QA +I KG+ Y+RKE +++P    H 
Sbjct: 60  EVRFLRQRYNYLLKHPILKPHPKQ-VVKPQKLKLQAPIISKGKNYSRKEPTLRPHPTSHL 118

Query: 118 NSNGRISNGAEINTLQKKAPMFDLNQNARSLSRKDPSFLSSAPP-LDLNHKDMSHSMKEP 176
           NSNGRISN AE   L+K   +FDLN NARS S+KD SF  SAPP  +LNHK+  HS KE 
Sbjct: 119 NSNGRISNVAEA-PLKKTGHLFDLNLNARSSSKKDASFNGSAPPVFELNHKERIHSSKEA 177

Query: 177 AKKSITPFFDLNQIA 191
            KKS+TPFFDLNQI+
Sbjct: 178 TKKSVTPFFDLNQIS 192