Miyakogusa Predicted Gene

Lj6g3v1077540.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1077540.1 tr|B9IMC3|B9IMC3_POPTR Stress-induced hydrophobic
peptide (Fragment) OS=Populus trichocarpa
GN=POPTR,85.19,3e-19,SUBFAMILY NOT NAMED,NULL; HYDROPHOBIC PROTEIN
RCI2 (LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6,CUFF.58928.1
         (114 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g36640.1                                                       142   1e-34
Glyma02g36640.2                                                        85   1e-17
Glyma20g22290.1                                                        64   4e-11
Glyma05g16860.1                                                        64   5e-11
Glyma10g28300.1                                                        63   9e-11
Glyma17g23600.1                                                        60   4e-10

>Glyma02g36640.1 
          Length = 75

 Score =  142 bits (357), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 66/73 (90%), Positives = 72/73 (98%)

Query: 41  MPNRCEICCEIMIAVLLPPVGVCFRHGCCSVEFIICLLLTILGYIPGIIYALYAIVYVDQ 100
           MP RCEICCEIMIA+L+PP+GVCFRHGCCSVEFIICLLLTILGYIPGIIYALYAI++VD+
Sbjct: 1   MPTRCEICCEIMIAILIPPLGVCFRHGCCSVEFIICLLLTILGYIPGIIYALYAIIFVDR 60

Query: 101 DQYFDEYRRPLYA 113
           DQYFDEYRRPLYA
Sbjct: 61  DQYFDEYRRPLYA 73


>Glyma02g36640.2 
          Length = 60

 Score = 85.1 bits (209), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 39/45 (86%), Positives = 43/45 (95%)

Query: 41 MPNRCEICCEIMIAVLLPPVGVCFRHGCCSVEFIICLLLTILGYI 85
          MP RCEICCEIMIA+L+PP+GVCFRHGCCSVEFIICLLLTILG +
Sbjct: 1  MPTRCEICCEIMIAILIPPLGVCFRHGCCSVEFIICLLLTILGVL 45


>Glyma20g22290.1 
          Length = 57

 Score = 63.9 bits (154), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 30/53 (56%), Positives = 42/53 (79%), Gaps = 1/53 (1%)

Query: 43 NRCEICCEIMIAVLLPPVGVCFRHGCCSVEFIICLLLTILGYIPGIIYALYAI 95
          +    C +I++A++LPP+GV  ++GC  VEF ICL+LT+ GYIPGIIYA+YAI
Sbjct: 4  DGAATCIDILLAIILPPLGVFLKYGC-QVEFWICLVLTLFGYIPGIIYAVYAI 55


>Glyma05g16860.1 
          Length = 54

 Score = 63.5 bits (153), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 33/52 (63%), Positives = 41/52 (78%), Gaps = 1/52 (1%)

Query: 45 CEICCEIMIAVLLPPVGVCFRHGCCSVEFIICLLLTILGYIPGIIYALYAIV 96
           E   E+++A+LLPPVGV  R+GC  VEF I L+LTILGYIPGIIYA+Y +V
Sbjct: 3  SETFLEVILAILLPPVGVFLRYGC-GVEFWIDLVLTILGYIPGIIYAIYVLV 53


>Glyma10g28300.1 
          Length = 57

 Score = 62.8 bits (151), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 29/53 (54%), Positives = 42/53 (79%), Gaps = 1/53 (1%)

Query: 43 NRCEICCEIMIAVLLPPVGVCFRHGCCSVEFIICLLLTILGYIPGIIYALYAI 95
          +    C +I++A++LPP+GV  ++GC  VEF ICL+LT+ GYIPGIIYA+Y+I
Sbjct: 4  DGAATCIDILLAIILPPLGVFLKYGC-QVEFWICLVLTLFGYIPGIIYAVYSI 55


>Glyma17g23600.1 
          Length = 54

 Score = 60.5 bits (145), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 40/52 (76%), Gaps = 1/52 (1%)

Query: 45 CEICCEIMIAVLLPPVGVCFRHGCCSVEFIICLLLTILGYIPGIIYALYAIV 96
           E   E+++A+LLPPVGV  R+GC  VE  I L+LTILGYIPGIIYA+Y ++
Sbjct: 3  SETFLEVILAILLPPVGVFLRYGC-GVELWIDLVLTILGYIPGIIYAIYVLI 53