Miyakogusa Predicted Gene

Lj6g3v1049120.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1049120.2 Non Chatacterized Hit- tr|I1KDG6|I1KDG6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.16883
PE,87.78,0,SecY,SecY/SEC61-alpha family; SECY_1,SecY/SEC61-alpha
family; SECY_2,SecY/SEC61-alpha family; 3a0501,CUFF.58836.2
         (536 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g30020.1                                                       891   0.0  
Glyma04g24960.1                                                       323   3e-88
Glyma03g30970.1                                                       139   1e-32
Glyma19g33790.1                                                        58   3e-08

>Glyma06g30020.1 
          Length = 540

 Score =  891 bits (2302), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/540 (84%), Positives = 482/540 (89%), Gaps = 7/540 (1%)

Query: 1   MLITVRQASSSPLC---LFLDRLTVSKPSSKSFKTSICQAHRTPS--PSHSWSSGNLSTS 55
           MLITVR+ASS        +L+R   +KPS     TSICQA  +    P+HSW++ +LSTS
Sbjct: 1   MLITVREASSCSSSPLSFWLNRFN-AKPSKTLKTTSICQASFSVQRRPTHSWNTRHLSTS 59

Query: 56  YEAANFDPLGINPDLSSGLSSTWKDLVCLFSQPFESTSSTEKGKPNSSRGVAAAIEDSSI 115
            E ANFDPLGIN DLSSGL+STWK+LVC  +Q FESTSS EKGKPNSS+GVAAAIEDSSI
Sbjct: 60  SELANFDPLGINSDLSSGLNSTWKNLVCSITQTFESTSSAEKGKPNSSQGVAAAIEDSSI 119

Query: 116 DFGDXXXXXXXXXXXXXXXXXVLSRLGVYIPLGGVNREAFIGNLDQNSLLSTLDSFSGGG 175
           DFGD                  LSRLGVYIPLGGVNREAF+GNLDQNSLLSTLDSFSGGG
Sbjct: 120 DFGDFFKGPLPGKFLKLLGFLALSRLGVYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGG 179

Query: 176 IGRLGLCSLGIVPFINAQIVFQLLAQVYPKLQDLQKREGEAGRKKILQYTRYASVGFAIV 235
           IGRLG+CSLGIVPFINAQIVFQLLAQVYPKLQDLQKREGEAGRKK+LQYTRYASVGFAIV
Sbjct: 180 IGRLGVCSLGIVPFINAQIVFQLLAQVYPKLQDLQKREGEAGRKKVLQYTRYASVGFAIV 239

Query: 236 QAIGQVLFLRPYVNDFSTEWVISSVILLTLGSAFTTYIGERITDLKLGNGTSLLIFTNII 295
           QAIGQVLFLRPYVNDFSTEWVISSVILLTLGS FT YIGERITDLKLGNGTSLLIFTNII
Sbjct: 240 QAIGQVLFLRPYVNDFSTEWVISSVILLTLGSVFTMYIGERITDLKLGNGTSLLIFTNII 299

Query: 296 SYLPASFGRTFSEAFNDANYVGLATIIVSFFLLVVGIVYVQEAERKIPLNYASRLT-RSS 354
           SYLPASFGRT ++AFNDANY+GL TI++SFFLLVVGIVYVQEAERKIPLNYASR T RS+
Sbjct: 300 SYLPASFGRTIAQAFNDANYIGLGTIVLSFFLLVVGIVYVQEAERKIPLNYASRFTSRST 359

Query: 355 GLEKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLSPLKSAAMALNPGGSFYLPFN 414
           GLEKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGL+ LK AA+ALNPGGSFYLPFN
Sbjct: 360 GLEKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLTALKKAAVALNPGGSFYLPFN 419

Query: 415 IFLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGRSTATFIKTVLSRISVLGSTFL 474
           I LIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGR+TATFIKTVLSRISVLGSTFL
Sbjct: 420 ILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGRTTATFIKTVLSRISVLGSTFL 479

Query: 475 AILAAGPAVVEQTTHLTAFRGFAGTSILILVGCATDTARKVQAEIISQKYKNIEFYDFDK 534
           AILAAGPAVVEQ THLTAFRGFAGTSILILVGCATDTARKVQAEIISQKYKNIEFYDFDK
Sbjct: 480 AILAAGPAVVEQITHLTAFRGFAGTSILILVGCATDTARKVQAEIISQKYKNIEFYDFDK 539


>Glyma04g24960.1 
          Length = 179

 Score =  323 bits (828), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 159/171 (92%), Positives = 164/171 (95%)

Query: 364 FKVNSSGVMPIIFSTSSLALPGTLARFTGLSPLKSAAMALNPGGSFYLPFNIFLIAFFNY 423
           ++VNSSGVMPIIFSTSSLALPGTLARFTGL+ LK A++ALNPGGSFYLPFNI LIAFFNY
Sbjct: 8   YQVNSSGVMPIIFSTSSLALPGTLARFTGLTALKKASVALNPGGSFYLPFNILLIAFFNY 67

Query: 424 YYTFLQLDPDDVSEQLKRQGASIPLVRPGRSTATFIKTVLSRISVLGSTFLAILAAGPAV 483
           YYTFLQLDPDDVSEQLKRQGASIPLVRPGRS ATFIKTVLSRISVLGSTFLAILAAGP V
Sbjct: 68  YYTFLQLDPDDVSEQLKRQGASIPLVRPGRSAATFIKTVLSRISVLGSTFLAILAAGPTV 127

Query: 484 VEQTTHLTAFRGFAGTSILILVGCATDTARKVQAEIISQKYKNIEFYDFDK 534
           VEQ THLTAFRGF GTSILILVGCATDTARKVQAEIISQKYKNIEFYDFDK
Sbjct: 128 VEQITHLTAFRGFVGTSILILVGCATDTARKVQAEIISQKYKNIEFYDFDK 178


>Glyma03g30970.1 
          Length = 564

 Score =  139 bits (349), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 195/405 (48%), Gaps = 32/405 (7%)

Query: 137 VLSRLGVYIPLGGVNREAFIGNLDQNSLLSTLDSFSGGGIG------RLGLCSLGIVPFI 190
           V+SR+G +IPL G +R      L     LS +   S   +G      +L +  LGI P I
Sbjct: 152 VISRVGYFIPLPGFDRR-----LIPEDYLSFVAGSSVDELGDFTAELKLSIFQLGISPQI 206

Query: 191 NAQIVFQLLAQVYPKLQDLQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLFLRPY--- 247
            A I+ Q+L  V P L  L+K EG  G +KI  Y  + S GFAI++A+    +  PY   
Sbjct: 207 IASIIMQVLCHVVPSLVKLRK-EGLDGHEKIKSYIWWMSFGFAILEALIVACYSLPYSIY 265

Query: 248 VNDFSTEWVISSVILLTLGSAFTTYIGERITDLKLGNGTSLLIFTNIIS-YLPASFGRTF 306
              +  + V+ + ILL  G+   T+I + I++   G G+SL+I   I++ Y+   +    
Sbjct: 266 AATYRVKHVMVTSILLVCGAMTITWICDTISESGFGQGSSLIICVGILTGYMETLYKMLT 325

Query: 307 SEAFNDANYVGLATIIVSFFLLV-VGIVYVQEAERKIPLNYASRLTRSSGLEKSA----- 360
             + +  ++      ++  F +V +  V V E  RK+ L Y      S+  E S      
Sbjct: 326 QLSVSAVSWWPYVLAVLGIFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREHSPITEVE 385

Query: 361 -YLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLSPLKSAAMALNP----GGSFYLPFNI 415
            Y+PF +N +G+ P++ ++  LA P  LA        + A   LNP    G   ++ ++I
Sbjct: 386 PYIPFNINPAGMQPVLTTSYLLAFPSILASLLRSPFWEHAKEMLNPETSVGAEPWVYYSI 445

Query: 416 FLIAFFNYYYTFLQLD--PDDVSEQLKRQGASIPLVRPGRSTATFIKTVLSRISVLGSTF 473
           +  AFF + +    +   P ++++ L + GA IP ++PG++T  ++  V +     G   
Sbjct: 446 Y--AFFVFLFNIFDIANMPKEIADYLNKMGARIPNIKPGKATIEYLSKVQASTRFWGGLL 503

Query: 474 LAILAAGPAVVEQ-TTHLTAFRGFAGTSILILVGCATDTARKVQA 517
           L++LA   +V++     + A      TS+LI+VG   +  R  QA
Sbjct: 504 LSVLATTSSVLDHYLRRVNAGFAIGFTSVLIIVGSIIELRRSYQA 548


>Glyma19g33790.1 
          Length = 377

 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 79/163 (48%), Gaps = 21/163 (12%)

Query: 137 VLSRLGVYIPLGGVNREAFIGNLDQNSLLSTLDSFSGGGIG------RLGLCSLGIVP-F 189
           V+SR+G +IPL G +R      L     LS +   S   +G      +L +  LGI P  
Sbjct: 99  VISRVGYFIPLPGFDRR-----LIPEDYLSFVAGSSVDELGDFTAELKLSIFQLGISPQI 153

Query: 190 IN-----AQIVFQLLAQVYPKLQDLQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLFL 244
           IN     A I  Q+L  V P L +L+K EG  G +KI  Y  + S GFAI++A+    + 
Sbjct: 154 INRVHYCADIHVQVLCHVVPSLVNLRK-EGLDGHEKIKSYIWWMSFGFAILEALIVACYS 212

Query: 245 RP---YVNDFSTEWVISSVILLTLGSAFTTYIGERITDLKLGN 284
            P   Y   +  + V+ + +LL  G+   T+I + I++    N
Sbjct: 213 LPYSIYAATYRVKHVMVTSVLLVCGAMTITWICDTISESGFDN 255