Miyakogusa Predicted Gene

Lj6g3v1018300.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1018300.1 Non Chatacterized Hit- tr|C5XMA3|C5XMA3_SORBI
Putative uncharacterized protein Sb03g023720
OS=Sorghu,51.95,0.00000000000005,seg,NULL; IGR,IGR protein
motif,CUFF.58766.1
         (109 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g22850.1                                                       144   2e-35
Glyma10g28730.1                                                       142   7e-35

>Glyma20g22850.1 
          Length = 110

 Score =  144 bits (363), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 80/111 (72%), Positives = 88/111 (79%), Gaps = 3/111 (2%)

Query: 1   MAWLQ--RSFNRGAFPVSTQSPCFSRFFSKSSSPYVVKVGIPEFLNGIGKGVESHVAKLE 58
           MAWLQ  R   +G   + +  P  SRFFSKSSSPYVVKVGIPEFLNGIGKGVESHV KLE
Sbjct: 1   MAWLQLQRIVTKGGANLISPLP-LSRFFSKSSSPYVVKVGIPEFLNGIGKGVESHVPKLE 59

Query: 59  TEIGDFQSLLVTRTXXXXXXGIPCKHRKLILKHTHKYRLGLWRPRAEAIKS 109
           +EIGDFQ LL+TRT      GIPCKHRKLILK+THKYRLGLWRPR E+I +
Sbjct: 60  SEIGDFQKLLLTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRVESINA 110


>Glyma10g28730.1 
          Length = 124

 Score =  142 bits (358), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 77/111 (69%), Positives = 82/111 (73%), Gaps = 4/111 (3%)

Query: 1   MAWLQ--RSFNRGAFPVSTQSPCFSRFFSKSSSPYVVKVGIPEFLNGIGKGVESHVAKLE 58
           MAWLQ  R         +  SP   RFFSK S PYV+KVGIPEFLNGIGKGVESHV KLE
Sbjct: 16  MAWLQLQRIITNTKGGANLISP-LPRFFSKCS-PYVLKVGIPEFLNGIGKGVESHVPKLE 73

Query: 59  TEIGDFQSLLVTRTXXXXXXGIPCKHRKLILKHTHKYRLGLWRPRAEAIKS 109
           +EIGDFQ LLV RT      GIPCKHRKLILK+THKYRLGLWRPRAE I +
Sbjct: 74  SEIGDFQKLLVIRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRAEFITA 124