Miyakogusa Predicted Gene

Lj6g3v1008210.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1008210.1 Non Chatacterized Hit- tr|K4AT96|K4AT96_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,42.19,0.00000000000002,zf-RING_3,NULL,CUFF.58759.1
         (145 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g04340.3                                                       187   5e-48
Glyma14g04340.2                                                       187   5e-48
Glyma14g04340.1                                                       187   5e-48
Glyma13g04100.2                                                       180   4e-46
Glyma13g04100.1                                                       180   4e-46
Glyma02g44470.1                                                       165   2e-41
Glyma02g44470.2                                                       165   2e-41
Glyma02g44470.3                                                       164   2e-41
Glyma13g04080.2                                                        72   1e-13
Glyma13g04080.1                                                        72   1e-13
Glyma02g22760.1                                                        62   2e-10
Glyma0024s00230.2                                                      60   1e-09
Glyma0024s00230.1                                                      60   1e-09

>Glyma14g04340.3 
          Length = 336

 Score =  187 bits (474), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 99/150 (66%), Positives = 112/150 (74%), Gaps = 6/150 (4%)

Query: 1   MSSVATYWCYTCRQPILLAGRDVTCPYCDGSFVQELNERQGIAPQHG--FSSLD---PQA 55
           MSS AT+WCY CRQPI+L GRD  CPYCDG FVQEL+E +GIAP H   FSS      Q 
Sbjct: 1   MSSGATHWCYACRQPIVLDGRDPVCPYCDGGFVQELDELRGIAPNHNHTFSSQSGDFHQM 60

Query: 56  PDIFDAIHSVIGQRGSAPRIGLRDAVDSYMRRRMAGNRDPNFDIRRGSGSGLVPEQTWGV 115
           PDIFDAIH+ +GQRGS  R GL DAVD++MR RMAG R+ NFD+R  SGS  VPEQ+WGV
Sbjct: 61  PDIFDAIHAFMGQRGSDQRFGLMDAVDNFMRHRMAG-RNSNFDVRGRSGSLPVPEQSWGV 119

Query: 116 FSSGSYLIVHDQGPGFSLPTGSSRGVPRRV 145
           +SSG YLI H Q PGF+L  GS RG PRRV
Sbjct: 120 YSSGPYLIFHGQVPGFTLSAGSPRGGPRRV 149


>Glyma14g04340.2 
          Length = 336

 Score =  187 bits (474), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 99/150 (66%), Positives = 112/150 (74%), Gaps = 6/150 (4%)

Query: 1   MSSVATYWCYTCRQPILLAGRDVTCPYCDGSFVQELNERQGIAPQHG--FSSLD---PQA 55
           MSS AT+WCY CRQPI+L GRD  CPYCDG FVQEL+E +GIAP H   FSS      Q 
Sbjct: 1   MSSGATHWCYACRQPIVLDGRDPVCPYCDGGFVQELDELRGIAPNHNHTFSSQSGDFHQM 60

Query: 56  PDIFDAIHSVIGQRGSAPRIGLRDAVDSYMRRRMAGNRDPNFDIRRGSGSGLVPEQTWGV 115
           PDIFDAIH+ +GQRGS  R GL DAVD++MR RMAG R+ NFD+R  SGS  VPEQ+WGV
Sbjct: 61  PDIFDAIHAFMGQRGSDQRFGLMDAVDNFMRHRMAG-RNSNFDVRGRSGSLPVPEQSWGV 119

Query: 116 FSSGSYLIVHDQGPGFSLPTGSSRGVPRRV 145
           +SSG YLI H Q PGF+L  GS RG PRRV
Sbjct: 120 YSSGPYLIFHGQVPGFTLSAGSPRGGPRRV 149


>Glyma14g04340.1 
          Length = 336

 Score =  187 bits (474), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 99/150 (66%), Positives = 112/150 (74%), Gaps = 6/150 (4%)

Query: 1   MSSVATYWCYTCRQPILLAGRDVTCPYCDGSFVQELNERQGIAPQHG--FSSLD---PQA 55
           MSS AT+WCY CRQPI+L GRD  CPYCDG FVQEL+E +GIAP H   FSS      Q 
Sbjct: 1   MSSGATHWCYACRQPIVLDGRDPVCPYCDGGFVQELDELRGIAPNHNHTFSSQSGDFHQM 60

Query: 56  PDIFDAIHSVIGQRGSAPRIGLRDAVDSYMRRRMAGNRDPNFDIRRGSGSGLVPEQTWGV 115
           PDIFDAIH+ +GQRGS  R GL DAVD++MR RMAG R+ NFD+R  SGS  VPEQ+WGV
Sbjct: 61  PDIFDAIHAFMGQRGSDQRFGLMDAVDNFMRHRMAG-RNSNFDVRGRSGSLPVPEQSWGV 119

Query: 116 FSSGSYLIVHDQGPGFSLPTGSSRGVPRRV 145
           +SSG YLI H Q PGF+L  GS RG PRRV
Sbjct: 120 YSSGPYLIFHGQVPGFTLSAGSPRGGPRRV 149


>Glyma13g04100.2 
          Length = 306

 Score =  180 bits (457), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 100/154 (64%), Positives = 115/154 (74%), Gaps = 10/154 (6%)

Query: 1   MSSVATYWCYTCRQPILLAGRDVTCPYCDGSFVQELNERQGIAPQHGFSSL---DPQAPD 57
           MSS  TYWCYTCRQPI L GR+  CPYCDG FVQELNE +G+A QHGFSS      Q PD
Sbjct: 1   MSSGTTYWCYTCRQPIWLEGREAICPYCDGGFVQELNELRGVARQHGFSSRMEDAHQMPD 60

Query: 58  IFDAIHSVIGQRGSAPRIGLRDAVDSYMRRRMAGNRDPNFDIRRGSGSG------LVPEQ 111
           I DA+ +V+ QRGS PRI +RDAVD++MR+RMAG R  NFD+RR SGSG      L+P++
Sbjct: 61  IMDAVRAVMEQRGSEPRIRVRDAVDNFMRQRMAG-RYTNFDVRRRSGSGSGSGSILIPDE 119

Query: 112 TWGVFSSGSYLIVHDQGPGFSLPTGSSRGVPRRV 145
           TWGVFSSG YLI H Q PGF+   GSSRG PRRV
Sbjct: 120 TWGVFSSGPYLIFHGQAPGFTNSNGSSRGGPRRV 153


>Glyma13g04100.1 
          Length = 306

 Score =  180 bits (457), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 100/154 (64%), Positives = 115/154 (74%), Gaps = 10/154 (6%)

Query: 1   MSSVATYWCYTCRQPILLAGRDVTCPYCDGSFVQELNERQGIAPQHGFSSL---DPQAPD 57
           MSS  TYWCYTCRQPI L GR+  CPYCDG FVQELNE +G+A QHGFSS      Q PD
Sbjct: 1   MSSGTTYWCYTCRQPIWLEGREAICPYCDGGFVQELNELRGVARQHGFSSRMEDAHQMPD 60

Query: 58  IFDAIHSVIGQRGSAPRIGLRDAVDSYMRRRMAGNRDPNFDIRRGSGSG------LVPEQ 111
           I DA+ +V+ QRGS PRI +RDAVD++MR+RMAG R  NFD+RR SGSG      L+P++
Sbjct: 61  IMDAVRAVMEQRGSEPRIRVRDAVDNFMRQRMAG-RYTNFDVRRRSGSGSGSGSILIPDE 119

Query: 112 TWGVFSSGSYLIVHDQGPGFSLPTGSSRGVPRRV 145
           TWGVFSSG YLI H Q PGF+   GSSRG PRRV
Sbjct: 120 TWGVFSSGPYLIFHGQAPGFTNSNGSSRGGPRRV 153


>Glyma02g44470.1 
          Length = 369

 Score =  165 bits (417), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 89/149 (59%), Positives = 104/149 (69%), Gaps = 5/149 (3%)

Query: 1   MSSVATYWCYTCRQPILLAGRDVTCPYCDGSFVQELNERQGIAPQHGFSSLD---PQAPD 57
           MSS AT+WC+ CRQP++L GRD  CPYCDG FVQEL+E +GIAP H F S      Q PD
Sbjct: 50  MSSGATHWCHACRQPVVLDGRDAVCPYCDGGFVQELDELEGIAPHHTFCSQSGEFHQMPD 109

Query: 58  IFDAIHSVIGQRGSAPRIGLRD-AVDSYMRRRMAGNRDPNFDIRRGSGSGLVPEQTWGVF 116
           IFDAI + +GQRGS  R  L D AVD++MR R AG R+ NFD+R  SGS  VPE++WGVF
Sbjct: 110 IFDAIPAFMGQRGSDQRSRLMDDAVDNFMRHRTAG-RNSNFDVRGRSGSRPVPERSWGVF 168

Query: 117 SSGSYLIVHDQGPGFSLPTGSSRGVPRRV 145
           SSG YLI H Q PG +   GS RG  R V
Sbjct: 169 SSGPYLIFHGQVPGSTFAAGSPRGGSRHV 197


>Glyma02g44470.2 
          Length = 358

 Score =  165 bits (417), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 89/149 (59%), Positives = 104/149 (69%), Gaps = 5/149 (3%)

Query: 1   MSSVATYWCYTCRQPILLAGRDVTCPYCDGSFVQELNERQGIAPQHGFSSLD---PQAPD 57
           MSS AT+WC+ CRQP++L GRD  CPYCDG FVQEL+E +GIAP H F S      Q PD
Sbjct: 39  MSSGATHWCHACRQPVVLDGRDAVCPYCDGGFVQELDELEGIAPHHTFCSQSGEFHQMPD 98

Query: 58  IFDAIHSVIGQRGSAPRIGLRD-AVDSYMRRRMAGNRDPNFDIRRGSGSGLVPEQTWGVF 116
           IFDAI + +GQRGS  R  L D AVD++MR R AG R+ NFD+R  SGS  VPE++WGVF
Sbjct: 99  IFDAIPAFMGQRGSDQRSRLMDDAVDNFMRHRTAG-RNSNFDVRGRSGSRPVPERSWGVF 157

Query: 117 SSGSYLIVHDQGPGFSLPTGSSRGVPRRV 145
           SSG YLI H Q PG +   GS RG  R V
Sbjct: 158 SSGPYLIFHGQVPGSTFAAGSPRGGSRHV 186


>Glyma02g44470.3 
          Length = 320

 Score =  164 bits (416), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 89/149 (59%), Positives = 104/149 (69%), Gaps = 5/149 (3%)

Query: 1   MSSVATYWCYTCRQPILLAGRDVTCPYCDGSFVQELNERQGIAPQHGFSSLD---PQAPD 57
           MSS AT+WC+ CRQP++L GRD  CPYCDG FVQEL+E +GIAP H F S      Q PD
Sbjct: 1   MSSGATHWCHACRQPVVLDGRDAVCPYCDGGFVQELDELEGIAPHHTFCSQSGEFHQMPD 60

Query: 58  IFDAIHSVIGQRGSAPRIGLRD-AVDSYMRRRMAGNRDPNFDIRRGSGSGLVPEQTWGVF 116
           IFDAI + +GQRGS  R  L D AVD++MR R AG R+ NFD+R  SGS  VPE++WGVF
Sbjct: 61  IFDAIPAFMGQRGSDQRSRLMDDAVDNFMRHRTAG-RNSNFDVRGRSGSRPVPERSWGVF 119

Query: 117 SSGSYLIVHDQGPGFSLPTGSSRGVPRRV 145
           SSG YLI H Q PG +   GS RG  R V
Sbjct: 120 SSGPYLIFHGQVPGSTFAAGSPRGGSRHV 148


>Glyma13g04080.2 
          Length = 236

 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/116 (42%), Positives = 56/116 (48%), Gaps = 38/116 (32%)

Query: 1   MSSVATYWCYTCRQPILLAGRDVTCPYCDGSFVQELNERQGIAPQHGFSSLDPQAPDIFD 60
           MSS ATYWCYTCRQPI LA RD  CPYCD  F+QEL+E QG                   
Sbjct: 1   MSSGATYWCYTCRQPICLARRDHICPYCDEGFLQELDELQG------------------- 41

Query: 61  AIHSVIGQRGSAPRIGLRDAVDSYMRRRMAGNRDPNFDIRRGSGSGLVPEQTWGVF 116
                + QRGS PR+G R     Y+          NF +RR   + L    T GVF
Sbjct: 42  ----GMEQRGSEPRMGGR-----YI----------NFGVRRPGSTPLPESWTRGVF 78


>Glyma13g04080.1 
          Length = 236

 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/116 (42%), Positives = 56/116 (48%), Gaps = 38/116 (32%)

Query: 1   MSSVATYWCYTCRQPILLAGRDVTCPYCDGSFVQELNERQGIAPQHGFSSLDPQAPDIFD 60
           MSS ATYWCYTCRQPI LA RD  CPYCD  F+QEL+E QG                   
Sbjct: 1   MSSGATYWCYTCRQPICLARRDHICPYCDEGFLQELDELQG------------------- 41

Query: 61  AIHSVIGQRGSAPRIGLRDAVDSYMRRRMAGNRDPNFDIRRGSGSGLVPEQTWGVF 116
                + QRGS PR+G R     Y+          NF +RR   + L    T GVF
Sbjct: 42  ----GMEQRGSEPRMGGR-----YI----------NFGVRRPGSTPLPESWTRGVF 78


>Glyma02g22760.1 
          Length = 309

 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 18/114 (15%)

Query: 2   SSVATYWCYTCRQPILLAGRDVTCPYCDGSFVQELNERQGIAPQHGFSSLDPQAPDIFDA 61
           +S  T+WCY+CR+P+ L  RD  CP C+  FV ELN+   + P            D+F+ 
Sbjct: 3   NSRNTHWCYSCRRPVWLGRRDAVCPSCNEGFVHELNDMVHVNPF-----------DLFE- 50

Query: 62  IHSVIGQRGSAPRIGLRDAVDSYMRRRMAGNRDPNFDIRRGSGSGLVPEQTWGV 115
              +        R+GL +   ++MR +MA +R  + DIR  + S   PE + G 
Sbjct: 51  ---MDNNEERDQRLGLMETFSAFMRHQMA-DRGRSHDIRAQTDSN--PEHSAGF 98


>Glyma0024s00230.2 
          Length = 309

 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 16/99 (16%)

Query: 2   SSVATYWCYTCRQPILLAGRDVTCPYCDGSFVQELNERQGIAPQHGFSSLDPQAPDIFDA 61
           +S  T+WCY+CR+P+ L  RDV CP C+  FV ELN+   + P   F   + +  D    
Sbjct: 3   NSRNTHWCYSCRRPVRLGRRDVVCPSCNLGFVHELNDIVHVNPFDLFGMDNNEERD---- 58

Query: 62  IHSVIGQRGSAPRIGLRDAVDSYMRRRMAGNRDPNFDIR 100
                       R+GL +   ++MR +MA +R  + DIR
Sbjct: 59  -----------QRLGLMETFSAFMRHQMA-DRGRSHDIR 85


>Glyma0024s00230.1 
          Length = 309

 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 16/99 (16%)

Query: 2   SSVATYWCYTCRQPILLAGRDVTCPYCDGSFVQELNERQGIAPQHGFSSLDPQAPDIFDA 61
           +S  T+WCY+CR+P+ L  RDV CP C+  FV ELN+   + P   F   + +  D    
Sbjct: 3   NSRNTHWCYSCRRPVRLGRRDVVCPSCNLGFVHELNDIVHVNPFDLFGMDNNEERD---- 58

Query: 62  IHSVIGQRGSAPRIGLRDAVDSYMRRRMAGNRDPNFDIR 100
                       R+GL +   ++MR +MA +R  + DIR
Sbjct: 59  -----------QRLGLMETFSAFMRHQMA-DRGRSHDIR 85