Miyakogusa Predicted Gene
- Lj6g3v0922330.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0922330.1 Non Chatacterized Hit- tr|G3AFJ7|G3AFJ7_SPAPN
Putative uncharacterized protein OS=Spathaspora
passal,29.93,0.0000005,ELONGIN-A-RELATED,NULL; TRANSCRIPTION
ELONGATION FACTOR B POLYPEPTIDE 3,NULL; Elongin_A,RNA
polymera,NODE_7552_length_995_cov_78.212059.path2.1
(222 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma08g42410.1 330 1e-90
Glyma08g42410.3 293 7e-80
Glyma08g42410.2 293 7e-80
Glyma08g42410.4 259 1e-69
Glyma18g12340.1 170 1e-42
Glyma18g12370.1 117 9e-27
>Glyma08g42410.1
Length = 230
Score = 330 bits (845), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 157/201 (78%), Positives = 184/201 (91%), Gaps = 4/201 (1%)
Query: 1 MMRRDQVPVRKL--PSLVDLCVEKVIDNLRYLGNVGSVDHHLLERILPHCTLEQLMHVEK 58
MMRRDQ+ R++ PSLVDLCV+KVIDN+RYLGNVGS+D HLLE+ILPHCT +QLMHVEK
Sbjct: 1 MMRRDQIRAREMRTPSLVDLCVQKVIDNVRYLGNVGSLDQHLLEQILPHCTADQLMHVEK 60
Query: 59 ASVGCDLSPVTDKLWKKFFEKQFGTHSTNEVIKRMREKKVSFKWMQLYEAKVKEIAEAEN 118
++ G +LSPVTDKLWKKF+EKQFGT++TNEVIKRM+EK+V+F+WMQLYEAK KE A+AEN
Sbjct: 61 STKGRNLSPVTDKLWKKFYEKQFGTNNTNEVIKRMKEKRVNFRWMQLYEAKGKERAQAEN 120
Query: 119 EAVARIKQRYQKEDARKQSRQVQLCTKTPPSSKKRFWGDN--GYNVSNLKSNIMKKSRIE 176
EA+ RI+Q Y+KEDARKQSRQV+ CTK PPSSK+RFWGDN GYNVSN+KSNIMKK++IE
Sbjct: 121 EALDRIRQLYKKEDARKQSRQVRTCTKVPPSSKRRFWGDNGPGYNVSNVKSNIMKKAKIE 180
Query: 177 LLKSHEVKNLAAMKNKSIQRN 197
LKSHEVKNLAAMKNKSIQRN
Sbjct: 181 FLKSHEVKNLAAMKNKSIQRN 201
>Glyma08g42410.3
Length = 184
Score = 293 bits (751), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 139/183 (75%), Positives = 166/183 (90%), Gaps = 4/183 (2%)
Query: 1 MMRRDQVPVRKL--PSLVDLCVEKVIDNLRYLGNVGSVDHHLLERILPHCTLEQLMHVEK 58
MMRRDQ+ R++ PSLVDLCV+KVIDN+RYLGNVGS+D HLLE+ILPHCT +QLMHVEK
Sbjct: 1 MMRRDQIRAREMRTPSLVDLCVQKVIDNVRYLGNVGSLDQHLLEQILPHCTADQLMHVEK 60
Query: 59 ASVGCDLSPVTDKLWKKFFEKQFGTHSTNEVIKRMREKKVSFKWMQLYEAKVKEIAEAEN 118
++ G +LSPVTDKLWKKF+EKQFGT++TNEVIKRM+EK+V+F+WMQLYEAK KE A+AEN
Sbjct: 61 STKGRNLSPVTDKLWKKFYEKQFGTNNTNEVIKRMKEKRVNFRWMQLYEAKGKERAQAEN 120
Query: 119 EAVARIKQRYQKEDARKQSRQVQLCTKTPPSSKKRFWGDN--GYNVSNLKSNIMKKSRIE 176
EA+ RI+Q Y+KEDARKQSRQV+ CTK PPSSK+RFWGDN GYNVSN+KSNIMKK++IE
Sbjct: 121 EALDRIRQLYKKEDARKQSRQVRTCTKVPPSSKRRFWGDNGPGYNVSNVKSNIMKKAKIE 180
Query: 177 LLK 179
LK
Sbjct: 181 FLK 183
>Glyma08g42410.2
Length = 184
Score = 293 bits (751), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 139/183 (75%), Positives = 166/183 (90%), Gaps = 4/183 (2%)
Query: 1 MMRRDQVPVRKL--PSLVDLCVEKVIDNLRYLGNVGSVDHHLLERILPHCTLEQLMHVEK 58
MMRRDQ+ R++ PSLVDLCV+KVIDN+RYLGNVGS+D HLLE+ILPHCT +QLMHVEK
Sbjct: 1 MMRRDQIRAREMRTPSLVDLCVQKVIDNVRYLGNVGSLDQHLLEQILPHCTADQLMHVEK 60
Query: 59 ASVGCDLSPVTDKLWKKFFEKQFGTHSTNEVIKRMREKKVSFKWMQLYEAKVKEIAEAEN 118
++ G +LSPVTDKLWKKF+EKQFGT++TNEVIKRM+EK+V+F+WMQLYEAK KE A+AEN
Sbjct: 61 STKGRNLSPVTDKLWKKFYEKQFGTNNTNEVIKRMKEKRVNFRWMQLYEAKGKERAQAEN 120
Query: 119 EAVARIKQRYQKEDARKQSRQVQLCTKTPPSSKKRFWGDN--GYNVSNLKSNIMKKSRIE 176
EA+ RI+Q Y+KEDARKQSRQV+ CTK PPSSK+RFWGDN GYNVSN+KSNIMKK++IE
Sbjct: 121 EALDRIRQLYKKEDARKQSRQVRTCTKVPPSSKRRFWGDNGPGYNVSNVKSNIMKKAKIE 180
Query: 177 LLK 179
LK
Sbjct: 181 FLK 183
>Glyma08g42410.4
Length = 179
Score = 259 bits (662), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 123/167 (73%), Positives = 147/167 (88%), Gaps = 2/167 (1%)
Query: 1 MMRRDQVPVRKL--PSLVDLCVEKVIDNLRYLGNVGSVDHHLLERILPHCTLEQLMHVEK 58
MMRRDQ+ R++ PSLVDLCV+KVIDN+RYLGNVGS+D HLLE+ILPHCT +QLMHVEK
Sbjct: 1 MMRRDQIRAREMRTPSLVDLCVQKVIDNVRYLGNVGSLDQHLLEQILPHCTADQLMHVEK 60
Query: 59 ASVGCDLSPVTDKLWKKFFEKQFGTHSTNEVIKRMREKKVSFKWMQLYEAKVKEIAEAEN 118
++ G +LSPVTDKLWKKF+EKQFGT++TNEVIKRM+EK+V+F+WMQLYEAK KE A+AEN
Sbjct: 61 STKGRNLSPVTDKLWKKFYEKQFGTNNTNEVIKRMKEKRVNFRWMQLYEAKGKERAQAEN 120
Query: 119 EAVARIKQRYQKEDARKQSRQVQLCTKTPPSSKKRFWGDNGYNVSNL 165
EA+ RI+Q Y+KEDARKQSRQV+ CTK PPSSK+RFWG N S L
Sbjct: 121 EALDRIRQLYKKEDARKQSRQVRTCTKVPPSSKRRFWGGNPLFFSCL 167
>Glyma18g12340.1
Length = 98
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 77/98 (78%), Positives = 90/98 (91%)
Query: 10 RKLPSLVDLCVEKVIDNLRYLGNVGSVDHHLLERILPHCTLEQLMHVEKASVGCDLSPVT 69
R P+LVDLCV+KVI N+RYLGNVGS D HLLE+ILPHCT +QLMHVEK++ G DLSPVT
Sbjct: 1 RPTPTLVDLCVQKVIHNVRYLGNVGSFDQHLLEQILPHCTADQLMHVEKSTKGRDLSPVT 60
Query: 70 DKLWKKFFEKQFGTHSTNEVIKRMREKKVSFKWMQLYE 107
DKLWKKFFEKQFGT+ST+EVIKRM+EK+VSF+WMQL+E
Sbjct: 61 DKLWKKFFEKQFGTNSTDEVIKRMKEKRVSFRWMQLFE 98
>Glyma18g12370.1
Length = 140
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 63/108 (58%), Positives = 74/108 (68%), Gaps = 24/108 (22%)
Query: 113 IAEAENEAVARIKQRYQKEDARKQSRQVQLCTKTPPSSKKRFWGDNG--YNVSNLKSNIM 170
+A+AENEA+ RI+Q Y+KEDARK SRQV+ CTK PPSSK+RFWGDNG YNVSN+KSNIM
Sbjct: 1 MAQAENEALDRIRQLYKKEDARKHSRQVRTCTKVPPSSKRRFWGDNGPRYNVSNVKSNIM 60
Query: 171 KKSRIELLK----------------------SHEVKNLAAMKNKSIQR 196
KK++IE LK H+VKNLAA KN SI R
Sbjct: 61 KKAKIEFLKRQHFFYDYLMLPRISSPIRTSIYHDVKNLAATKNNSIHR 108