Miyakogusa Predicted Gene

Lj6g3v0920690.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0920690.1 tr|B9GT26|B9GT26_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_551239 PE=4 SV=1,36.65,4e-18,
,CUFF.58526.1
         (201 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g42160.1                                                       184   4e-47
Glyma18g12850.1                                                        87   9e-18

>Glyma08g42160.1 
          Length = 181

 Score =  184 bits (468), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 108/203 (53%), Positives = 123/203 (60%), Gaps = 52/203 (25%)

Query: 1   MVLISGTGNNKNVLQQTHDERAKAQGGMVVNNSHQQGNRSVESGRTQNLSNTGLIKEMTR 60
           MVLISG  NNK+VLQQT+DERAKAQG  V+ NSHQ GN+++ESGRTQN+ N+GL K ++ 
Sbjct: 1   MVLISG--NNKSVLQQTNDERAKAQGVTVLQNSHQHGNKNIESGRTQNVVNSGLTKAIST 58

Query: 61  MDEFKYGFPSESLSTTSNKWWGSSDHGDSTGTNPGTAKS-QPEER-GGEAEKVPCKTGNA 118
           MDEFK GFPSE LSTTSNKWWG+SD  D  G N   AKS QPEE+ G E +K+       
Sbjct: 59  MDEFKCGFPSEGLSTTSNKWWGNSDRDDRAGANANGAKSHQPEEKVGAETDKM------- 111

Query: 119 ENSETTQGSSLLTEENVACKTGNAENSETTQGSSLLTEENVACETGNAQNSETPQGSSLL 178
                                                    A ETG A+ SE P GSSLL
Sbjct: 112 -----------------------------------------AHETGKAEKSEIPHGSSLL 130

Query: 179 TAVRKRAVEEGREAFKLGVFRGY 201
            AVRK AVEEGREA KLGVFRGY
Sbjct: 131 KAVRKSAVEEGREALKLGVFRGY 153


>Glyma18g12850.1 
          Length = 109

 Score = 87.4 bits (215), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 58/141 (41%), Positives = 64/141 (45%), Gaps = 60/141 (42%)

Query: 61  MDEFKYGFPSESLSTTSNKWWGSSDHGDSTGTNPGTAKSQPEERGGEAEKVPCKTGNAEN 120
           MDEFK GFPS+ LSTTSNKWWG++D  D  G N   AK                      
Sbjct: 1   MDEFKCGFPSKGLSTTSNKWWGNTDRDDCAGANANGAK---------------------- 38

Query: 121 SETTQGSSLLTEENVACKTGNAENSETTQGSSLLTEENVACETGNAQNSETPQGSSLLTA 180
                         +A +T  AENSE                         P+GSSLL A
Sbjct: 39  --------------MAHETVKAENSEI------------------------PRGSSLLKA 60

Query: 181 VRKRAVEEGREAFKLGVFRGY 201
           VRKRAVEEGREA KL VFRGY
Sbjct: 61  VRKRAVEEGREALKLEVFRGY 81