Miyakogusa Predicted Gene

Lj6g3v0920170.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0920170.1 tr|G7IXK4|G7IXK4_MEDTR Vacuolar protein
sorting-associated protein-like protein OS=Medicago
truncatu,96,0,EAP30,EAP30; SUBFAMILY NOT NAMED,NULL; EAP30 SUBUNIT OF
ELL COMPLEX,EAP30; "Winged helix" DNA-bindin,CUFF.58482.1
         (250 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g42650.1                                                       484   e-137
Glyma18g11630.1                                                       476   e-134
Glyma09g13190.1                                                        94   1e-19
Glyma01g26850.1                                                        92   4e-19
Glyma05g06210.1                                                        79   6e-15
Glyma01g28280.1                                                        71   1e-12

>Glyma08g42650.1 
          Length = 250

 Score =  484 bits (1247), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 232/250 (92%), Positives = 244/250 (97%)

Query: 1   MRRRPGIGGLQTAAAARDQYRLLGENVAKIRTDMMKEQLSTFRSQLEDFARKHKNDIRKN 60
           MRRRPGIGGLQT AAARDQ+RLLGENVAKIRTD+MKEQL+TFRSQLEDFARKHKNDIRKN
Sbjct: 1   MRRRPGIGGLQTHAAARDQFRLLGENVAKIRTDLMKEQLATFRSQLEDFARKHKNDIRKN 60

Query: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVDICLATRPHNGGLINL 120
           P+FRSQFHEMCAKVGVDPLASNKGFW+ELLG+GDFYYELGVQIVDICLATR HNGGLI+L
Sbjct: 61  PSFRSQFHEMCAKVGVDPLASNKGFWSELLGLGDFYYELGVQIVDICLATRAHNGGLIDL 120

Query: 121 QELCSLLRQRRKSDRGVVTEDDCLRAISKLKVLGSGFEVISVGKRKLVRSVPTELNKDHN 180
            ELCSLLRQRRKSDR VV+EDDCLRAI KLKVLGSGFEVISVGK+KLVRSVPTELNKDHN
Sbjct: 121 HELCSLLRQRRKSDREVVSEDDCLRAIKKLKVLGSGFEVISVGKKKLVRSVPTELNKDHN 180

Query: 181 EILELAQAQGFVTVDEVERRLSWTSGRAIDALDTLLDEGLAMIDDGHRDGKRRYWFPCVS 240
           EILELAQAQGFVTVDEVERRLSW+SGRAIDALDTLLDEGLAMIDDGHRDG+RRYWFPCVS
Sbjct: 181 EILELAQAQGFVTVDEVERRLSWSSGRAIDALDTLLDEGLAMIDDGHRDGRRRYWFPCVS 240

Query: 241 PISSLIGIDS 250
           PISS IG+DS
Sbjct: 241 PISSSIGVDS 250


>Glyma18g11630.1 
          Length = 250

 Score =  476 bits (1224), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 228/250 (91%), Positives = 242/250 (96%)

Query: 1   MRRRPGIGGLQTAAAARDQYRLLGENVAKIRTDMMKEQLSTFRSQLEDFARKHKNDIRKN 60
           MRRRPGIGGLQT AAARDQ+RLLGENVAKIRTD+MKEQL+TFRSQLEDFARKHK+DIRKN
Sbjct: 1   MRRRPGIGGLQTHAAARDQFRLLGENVAKIRTDLMKEQLATFRSQLEDFARKHKDDIRKN 60

Query: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVDICLATRPHNGGLINL 120
           PAFRSQFHEMCAKVGVDPLASNKGFW+ELLG+GDFYYELGVQIVDICLATR HNGGLI+L
Sbjct: 61  PAFRSQFHEMCAKVGVDPLASNKGFWSELLGLGDFYYELGVQIVDICLATRVHNGGLIDL 120

Query: 121 QELCSLLRQRRKSDRGVVTEDDCLRAISKLKVLGSGFEVISVGKRKLVRSVPTELNKDHN 180
           QELC LLR RRK+DR VV+EDDCLRAI KLKVLGSGFEVISVGK+KLVRSVPTELNKDHN
Sbjct: 121 QELCHLLRHRRKTDREVVSEDDCLRAIKKLKVLGSGFEVISVGKKKLVRSVPTELNKDHN 180

Query: 181 EILELAQAQGFVTVDEVERRLSWTSGRAIDALDTLLDEGLAMIDDGHRDGKRRYWFPCVS 240
           EILELAQAQGFVTVDEVERRLSW+SGRAIDALDTLLDEGLAMIDDG +DG+RRYWFPCVS
Sbjct: 181 EILELAQAQGFVTVDEVERRLSWSSGRAIDALDTLLDEGLAMIDDGDKDGRRRYWFPCVS 240

Query: 241 PISSLIGIDS 250
           PISS IG+DS
Sbjct: 241 PISSSIGVDS 250


>Glyma09g13190.1 
          Length = 101

 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 42/53 (79%), Positives = 49/53 (92%)

Query: 1  MRRRPGIGGLQTAAAARDQYRLLGENVAKIRTDMMKEQLSTFRSQLEDFARKH 53
          MRRRPGIGGL+T  AARDQ+RLLG+NVAKI+T++MKEQL TF SQLEDF+RKH
Sbjct: 1  MRRRPGIGGLETHTAARDQFRLLGQNVAKIKTNLMKEQLGTFHSQLEDFSRKH 53


>Glyma01g26850.1 
          Length = 51

 Score = 92.4 bits (228), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 44/50 (88%), Positives = 48/50 (96%)

Query: 1  MRRRPGIGGLQTAAAARDQYRLLGENVAKIRTDMMKEQLSTFRSQLEDFA 50
          MRRRPGIGGLQT AAARDQ+RLLG+NVAKI TD+MKEQL+TFRSQLEDFA
Sbjct: 1  MRRRPGIGGLQTHAAARDQFRLLGQNVAKIITDLMKEQLATFRSQLEDFA 50


>Glyma05g06210.1 
          Length = 49

 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 39/49 (79%), Positives = 43/49 (87%)

Query: 103 IVDICLATRPHNGGLINLQELCSLLRQRRKSDRGVVTEDDCLRAISKLK 151
           IVDICLATR H+GGLI++QELC LL QRRKSDR VV+E DCLRAI KLK
Sbjct: 1   IVDICLATRVHSGGLIDVQELCHLLCQRRKSDREVVSEIDCLRAIKKLK 49


>Glyma01g28280.1 
          Length = 72

 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 32/37 (86%), Positives = 36/37 (97%)

Query: 17 RDQYRLLGENVAKIRTDMMKEQLSTFRSQLEDFARKH 53
          RDQ+RLLG+NVAKIRTD+MKEQL+T RSQLEDFARKH
Sbjct: 6  RDQFRLLGQNVAKIRTDLMKEQLATIRSQLEDFARKH 42