Miyakogusa Predicted Gene

Lj6g3v0920000.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0920000.1 Non Chatacterized Hit- tr|K4BQJ4|K4BQJ4_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,38.82,1e-18,FAMILY NOT NAMED,NULL; PMD,Aminotransferase-like,
plant mobile domain,CUFF.58477.1
         (277 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g11860.1                                                       239   2e-63
Glyma10g09670.1                                                       224   7e-59
Glyma08g42610.1                                                       222   3e-58
Glyma18g11890.1                                                        98   8e-21
Glyma08g42590.1                                                        97   2e-20
Glyma18g36510.1                                                        52   1e-06
Glyma08g38010.1                                                        49   5e-06
Glyma18g34370.1                                                        49   6e-06

>Glyma18g11860.1 
          Length = 572

 Score =  239 bits (611), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 126/204 (61%), Positives = 142/204 (69%), Gaps = 8/204 (3%)

Query: 1   MKIDNARLALNSAMGDFLWRPYVRYGGKCRAFYPENEIQQVPFEADLDKE----LASFVR 56
           +KIDN RLAL+SAM  F WRPYV+Y GK + FYPENE   V  + +LDKE    L SFV 
Sbjct: 313 LKIDNVRLALDSAMEHFRWRPYVQYAGKFKVFYPENE-TLVLIDTNLDKEPTGLLVSFVT 371

Query: 57  CMRVSELVGIDSTILQYCPHRVAMQFGMDQDVLDCVPVFRRTEGIAWENYCRPISDRNLY 116
           C+RVS LVGI STI +Y PHRVAMQFGMDQDV   VP F  TE IAW+NYCR ISDR+LY
Sbjct: 372 CLRVSVLVGIQSTIKKYLPHRVAMQFGMDQDVPGRVPTFHGTEAIAWKNYCRTISDRSLY 431

Query: 117 FPSRLFEADVTTRYARWWKQSVM-HHQDFAVNIVHRKRSTMPSTCGPHVVKENISCNVAD 175
           FP+RLFE DVTTRYA WWKQSV+  H DFA NIV RKRS  P   GPHV+K N     AD
Sbjct: 432 FPARLFEGDVTTRYAMWWKQSVLCRHHDFAKNIVQRKRSLRPPPHGPHVLKANKKGYDAD 491

Query: 176 VPPVFPPKLISTVIVGKSCDDGSK 199
           VPP F    + T   G S +D  +
Sbjct: 492 VPPGFSH--LKTAPSGNSGEDNGE 513


>Glyma10g09670.1 
          Length = 548

 Score =  224 bits (571), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 134/253 (52%), Positives = 152/253 (60%), Gaps = 49/253 (19%)

Query: 1   MKIDNARLALNSAMGDFLWRPYVRYGG--KCRAFYPENEIQQVPFEADLDKE----LASF 54
           ++IDN RLA+ SAM  F WRPYV+Y G  K + +YPENE   V  + DLDKE    LASF
Sbjct: 320 LEIDNVRLAVESAMDHFRWRPYVQYAGTGKFKVYYPENETL-VILDTDLDKEPTGILASF 378

Query: 55  VRCMRVSELVGIDSTILQYCPHRVAMQFGMDQDVLDCVPVFRRTEGIAWENYCRPISDRN 114
           V C++VS LVGI S I  Y PHRVAMQFGMDQDV  CVP+FR T+  AW+NYCRPISD +
Sbjct: 379 VACLKVSLLVGIQSNIELYLPHRVAMQFGMDQDVPSCVPIFRGTKENAWKNYCRPISDTH 438

Query: 115 LYFPSRLFEADVTTRYARWWKQSVMH-HQDFAVNIVHRKRSTMPSTCGPHVVKENI-SCN 172
           LYFP+RLFE DVTTRYA WWKQ V   H+DF  NIV RKRS M      HV K N  S N
Sbjct: 439 LYFPARLFEGDVTTRYATWWKQLVPSCHRDFVKNIVRRKRSLM-----SHVSKANKNSGN 493

Query: 173 VADVPPVFPPKLISTVIVGKSCDDGSKTVEVDNDADVTSGFLPNHLQVVPFGNSVQDGSK 232
            ADVPP F P               SKT                    +P GNS QD  +
Sbjct: 494 DADVPPGFSP---------------SKT--------------------LPSGNSGQDDLQ 518

Query: 233 ANGNTAVDVPTSF 245
           AN N   D+PT F
Sbjct: 519 ANENIDADIPTRF 531


>Glyma08g42610.1 
          Length = 580

 Score =  222 bits (565), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 122/227 (53%), Positives = 141/227 (62%), Gaps = 39/227 (17%)

Query: 1   MKIDNARLALNSAMGDFLWRPYVRYGGKCRAFYPENEIQQVPFEADLDKE----LASFVR 56
           +KIDN RLAL SAM  F WRPYV+Y GK + FYPENE   V  + DLDKE    L SF  
Sbjct: 286 LKIDNVRLALESAMEHFCWRPYVQYAGKFKVFYPENE-TLVLIDTDLDKEPTGLLVSFAT 344

Query: 57  CMRVSELVGIDSTILQYCPHRVAMQFGMDQDVLDCVPVFRRTEGIAWENYCRPISDRNLY 116
           C+RVS LVGI STI +Y PHRVAMQFGMDQDV  C+P F  T+  AW+NYCRPISDR+LY
Sbjct: 345 CLRVSLLVGIQSTIKKYLPHRVAMQFGMDQDVPSCLPRFDGTKDFAWKNYCRPISDRSLY 404

Query: 117 FPSRLFEADVTTRYARWWKQSV---------MHHQDFAVNIVHRKRSTMPSTCGPHVVKE 167
           FP+RLFE D+TTRYA+WWK+S+         M HQDFA NIV RKRS       P V K 
Sbjct: 405 FPARLFEGDITTRYAKWWKRSLMGHQDFAKNMGHQDFAKNIVRRKRSPR----SPQVSKA 460

Query: 168 NISCNVADVPPVFPPKLISTVIVGKSCDDGSKTVEVDNDADVTSGFL 214
           N + NV                     DD S   + ++D D  SGFL
Sbjct: 461 NKNGNV---------------------DDDSNARKRNSDVDAPSGFL 486


>Glyma18g11890.1 
          Length = 577

 Score = 98.2 bits (243), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 61/140 (43%), Positives = 81/140 (57%), Gaps = 10/140 (7%)

Query: 1   MKIDNARLALNS--AMGDFLWRPYVRYGGKCRAFYPENEIQQVPFEADLDKELASFVRCM 58
           +K DN +L L+S  A   F+W PY          Y EN++  V    + D EL SF RC+
Sbjct: 319 LKGDNLKLILDSVGAENGFIWHPY--ENSPALQLYNENDMW-VCDNPNFDDELESFARCL 375

Query: 59  RVSELVGIDSTILQYCPHRVAMQFGMDQDVLDCVPVFRRTEGIAWENYCRPISDRNLYFP 118
           RVSELVG++  I QY P+RVAMQFGMDQD+   +  +       W +Y +P+ D NLY  
Sbjct: 376 RVSELVGME-CIEQYLPNRVAMQFGMDQDIPGMLAHYNDN---PWISYSQPVMDTNLYTA 431

Query: 119 -SRLFEADVTTRYARWWKQS 137
                + +VT+RY RWWKQS
Sbjct: 432 LCACHQPNVTSRYYRWWKQS 451


>Glyma08g42590.1 
          Length = 322

 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/117 (48%), Positives = 68/117 (58%), Gaps = 3/117 (2%)

Query: 129 RYARWWKQSVMHHQDFAVNIVHRKRSTMPSTCGPHVVKENISCNVADVPPVFPPKLISTV 188
           RYA+WWK++V  HQDFA NIV    S       PHV K N + N AD PP F PK +STV
Sbjct: 94  RYAKWWKKTVPSHQDFAKNIVQSGGSPKSPHSAPHVSKANTNGNDADFPPGFLPKPVSTV 153

Query: 189 IVGKSCDDGSKTVEVDNDADVTSGFLPNHLQVVPFGNSVQDG--SKANGNTAVDVPT 243
             GKS  D S   + ++DAD  SGFL + L+    GNS QDG   K   +T  DVPT
Sbjct: 154 YFGKSGKDHSNARKGNSDADAPSGFLKS-LKTATSGNSYQDGLKDKEKIDTNGDVPT 209


>Glyma18g36510.1 
          Length = 306

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/38 (57%), Positives = 27/38 (71%)

Query: 84  MDQDVLDCVPVFRRTEGIAWENYCRPISDRNLYFPSRL 121
           M Q+VLDCV  F  T+GI W+NY  PIS+ N YFP+ L
Sbjct: 173 MHQEVLDCVATFFGTKGITWKNYYIPISNGNFYFPALL 210


>Glyma08g38010.1 
          Length = 261

 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 13/73 (17%)

Query: 117 FPSRLFEADVTTRYARWWKQSVM-HHQDFAVNI------------VHRKRSTMPSTCGPH 163
           F    +E DVTTRYARWWKQ ++ HH+DFA NI            + R +  +      H
Sbjct: 134 FLLGFYEGDVTTRYARWWKQPILYHHRDFAKNISRNMFVCMYFYNIFRHQPMLRHGMRAH 193

Query: 164 VVKENISCNVADV 176
           + ++N+S  + ++
Sbjct: 194 MHEQNLSIMLVEI 206


>Glyma18g34370.1 
          Length = 140

 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 22/30 (73%), Positives = 24/30 (80%), Gaps = 1/30 (3%)

Query: 121 LFEADVTTRYARWWKQSVM-HHQDFAVNIV 149
            FE DVTTRYARWWKQS++ HH DFA NI 
Sbjct: 110 FFEGDVTTRYARWWKQSILYHHCDFAKNIT 139