Miyakogusa Predicted Gene

Lj6g3v0918820.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0918820.1 tr|Q8RXC3|Q8RXC3_ARATH Aminotransferase-like,
plant mobile domain family protein OS=Arabidopsis
thal,42.54,2e-19,PMD,Aminotransferase-like, plant mobile domain;
seg,NULL; FAMILY NOT NAMED,NULL,CUFF.58455.1
         (134 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g11890.1                                                       201   3e-52
Glyma08g42550.1                                                       102   1e-22
Glyma18g11860.1                                                        97   4e-21
Glyma08g42610.1                                                        96   1e-20
Glyma10g09670.1                                                        84   3e-17
Glyma08g42560.1                                                        77   7e-15
Glyma18g34220.1                                                        50   5e-07
Glyma18g34370.1                                                        49   1e-06
Glyma18g36580.1                                                        49   1e-06

>Glyma18g11890.1 
          Length = 577

 Score =  201 bits (510), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 93/134 (69%), Positives = 104/134 (77%)

Query: 1   MKLRVTLWAPFQLVQVWALERFPALQPNPCPVRQGQPIMAKWDRVXXXXXXXXXXILDDA 60
           ++L VTLWAPFQLVQVWALERFPALQP P  + QGQ +M KW  V          ILD  
Sbjct: 272 VELEVTLWAPFQLVQVWALERFPALQPLPDVIEQGQLLMTKWHAVKMLKGDNLKLILDSV 331

Query: 61  GSRNGFLWRPYQNSPPLYLYNEKDMWMCDNPCFDDELQAFSRCLRVSELVGMGCIENYRP 120
           G+ NGF+W PY+NSP L LYNE DMW+CDNP FDDEL++F+RCLRVSELVGM CIE Y P
Sbjct: 332 GAENGFIWHPYENSPALQLYNENDMWVCDNPNFDDELESFARCLRVSELVGMECIEQYLP 391

Query: 121 NRVAMQFGMDQDIP 134
           NRVAMQFGMDQDIP
Sbjct: 392 NRVAMQFGMDQDIP 405


>Glyma08g42550.1 
          Length = 317

 Score =  102 bits (254), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 48/90 (53%), Positives = 61/90 (67%), Gaps = 1/90 (1%)

Query: 1   MKLRVTLWAPFQLVQVWALERFPALQPN-PCPVRQGQPIMAKWDRVXXXXXXXXXXILDD 59
           +++ V LW PFQL QVWALERFP L    P  +RQG+ ++AKW +V          ILD 
Sbjct: 164 VEVGVKLWTPFQLAQVWALERFPLLHSRLPHGIRQGKLMVAKWHKVKMLKHDSFKLILDS 223

Query: 60  AGSRNGFLWRPYQNSPPLYLYNEKDMWMCD 89
             +RNGF+WRPY+NSPPL LYNEKD+ +C 
Sbjct: 224 LRARNGFIWRPYKNSPPLELYNEKDIILCS 253


>Glyma18g11860.1 
          Length = 572

 Score = 97.1 bits (240), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 58/141 (41%), Positives = 76/141 (53%), Gaps = 9/141 (6%)

Query: 1   MKLRVTLWAPFQLVQVWALERFPALQPNPCPVRQGQPIMAKWDRVXXXXXXXXXXILDDA 60
           ++L VTL +PF LVQ+W  ERF  LQP P  + Q  P++ +W +V           LD A
Sbjct: 266 LELEVTLLSPFYLVQIWVWERFMNLQPQPMLINQEDPMLFRWHKVNTLKIDNVRLALDSA 325

Query: 61  GSRNGFLWRPYQNSPPLY--LYNEKDMWMCDNPCFDDE----LQAFSRCLRVSELVGM-G 113
                F WRPY      +   Y E +  +  +   D E    L +F  CLRVS LVG+  
Sbjct: 326 MEH--FRWRPYVQYAGKFKVFYPENETLVLIDTNLDKEPTGLLVSFVTCLRVSVLVGIQS 383

Query: 114 CIENYRPNRVAMQFGMDQDIP 134
            I+ Y P+RVAMQFGMDQD+P
Sbjct: 384 TIKKYLPHRVAMQFGMDQDVP 404


>Glyma08g42610.1 
          Length = 580

 Score = 95.9 bits (237), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/141 (40%), Positives = 76/141 (53%), Gaps = 9/141 (6%)

Query: 1   MKLRVTLWAPFQLVQVWALERFPALQPNPCPVRQGQPIMAKWDRVXXXXXXXXXXILDDA 60
           ++L VTL +PF LVQ+W  ERF  LQP P  +    P+M +W +V           L+ A
Sbjct: 239 LELEVTLQSPFYLVQIWVWERFKNLQPQPRLINHEDPMMFRWHKVKALKIDNVRLALESA 298

Query: 61  GSRNGFLWRPYQNSPPLY--LYNEKDMWMCDNPCFDDE----LQAFSRCLRVSELVGM-G 113
                F WRPY      +   Y E +  +  +   D E    L +F+ CLRVS LVG+  
Sbjct: 299 MEH--FCWRPYVQYAGKFKVFYPENETLVLIDTDLDKEPTGLLVSFATCLRVSLLVGIQS 356

Query: 114 CIENYRPNRVAMQFGMDQDIP 134
            I+ Y P+RVAMQFGMDQD+P
Sbjct: 357 TIKKYLPHRVAMQFGMDQDVP 377


>Glyma10g09670.1 
          Length = 548

 Score = 84.3 bits (207), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 53/143 (37%), Positives = 74/143 (51%), Gaps = 11/143 (7%)

Query: 1   MKLRVTLWAPFQLVQVWALERFPALQPNPCPVRQGQPIMAKWDRVXXXXXXXXXXILDDA 60
           ++L  TL +PF L+Q+W  ERF  LQP P  +    P++ +W +V           ++ A
Sbjct: 273 LELVTTLQSPFYLIQIWVWERFKNLQPQPKLINHEDPVLFRWHKVKALEIDNVRLAVESA 332

Query: 61  GSRNGFLWRPYQNSPPL----YLYNEKDMWMCDNPCFDDE----LQAFSRCLRVSELVGM 112
              + F WRPY            Y E +  +  +   D E    L +F  CL+VS LVG+
Sbjct: 333 --MDHFRWRPYVQYAGTGKFKVYYPENETLVILDTDLDKEPTGILASFVACLKVSLLVGI 390

Query: 113 GC-IENYRPNRVAMQFGMDQDIP 134
              IE Y P+RVAMQFGMDQD+P
Sbjct: 391 QSNIELYLPHRVAMQFGMDQDVP 413


>Glyma08g42560.1 
          Length = 295

 Score = 76.6 bits (187), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 52/137 (37%), Positives = 65/137 (47%), Gaps = 47/137 (34%)

Query: 1   MKLRVTLWAPFQLVQVWALERFPALQPNPCP--VRQGQPIMAKWDRVXXXXXXXXXXILD 58
           ++L VTLWAPFQLVQ              CP  + QGQ +MAKW  +           +D
Sbjct: 180 VELEVTLWAPFQLVQ-------------SCPRVIEQGQLLMAKWHVLE----------MD 216

Query: 59  DAGSRNGFLWRPYQNSPPLYLYNEKDMWMCDNPCFDDEL-QAFSRCLRVSELVGMGCIEN 117
             G+                      M +     F  ++ ++F+ CLRV ELVG  CIE 
Sbjct: 217 TFGAH---------------------MIILQLSSFTMKMTKSFAHCLRVLELVGTKCIER 255

Query: 118 YRPNRVAMQFGMDQDIP 134
           Y PNRVAMQF MDQDIP
Sbjct: 256 YSPNRVAMQFRMDQDIP 272


>Glyma18g34220.1 
          Length = 202

 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 3/70 (4%)

Query: 3   LRVTLWAPFQ-LVQVWALERFPALQPNPCPVRQGQPIMAKWDRVXXXXXXXXXXILDDAG 61
           L VTLW+PF  LV +W  ERF  LQP P  +   +P++ +W ++           LD A 
Sbjct: 55  LTVTLWSPFYYLVYIWVWERFSNLQPQPRLINHEKPMLCRWHKLNPLKIEGRRFALDSA- 113

Query: 62  SRNGFLWRPY 71
            R+ F W PY
Sbjct: 114 -RDYFPWHPY 122


>Glyma18g34370.1 
          Length = 140

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 3/70 (4%)

Query: 3  LRVTLWAPFQ-LVQVWALERFPALQPNPCPVRQGQPIMAKWDRVXXXXXXXXXXILDDAG 61
          L VTLW+PF  LV +W  ERF  LQP P  +   +P++++  ++           LD A 
Sbjct: 31 LDVTLWSPFYYLVHIWVWERFSNLQPQPRLINHEKPMLSRRHQLNPLKIEERRFALDSA- 89

Query: 62 SRNGFLWRPY 71
           R+ FLW PY
Sbjct: 90 -RDYFLWHPY 98


>Glyma18g36580.1 
          Length = 133

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 3/70 (4%)

Query: 3   LRVTLWAPFQ-LVQVWALERFPALQPNPCPVRQGQPIMAKWDRVXXXXXXXXXXILDDAG 61
           L VTLW+PF  LV +W LERF  LQP P  +   +P++ +W ++           LD A 
Sbjct: 63  LDVTLWSPFYYLVHIWVLERFSNLQPQPRLINHEKPMLCRWHKLNSFKIEGRRFALDSA- 121

Query: 62  SRNGFLWRPY 71
            R+ F   PY
Sbjct: 122 -RDYFPEHPY 130