Miyakogusa Predicted Gene

Lj6g3v0896580.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0896580.1 Non Chatacterized Hit- tr|E1Z8V7|E1Z8V7_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,42.06,2e-18,seg,NULL; Ankyrin repeat,Ankyrin
repeat-containing domain; ANK_REP_REGION,Ankyrin repeat-containing
,NODE_75465_length_657_cov_68.515984.path1.1
         (175 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g11990.1                                                       275   2e-74
Glyma02g25260.1                                                       270   6e-73
Glyma09g15370.1                                                       112   1e-25

>Glyma18g11990.1 
          Length = 177

 Score =  275 bits (703), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 137/176 (77%), Positives = 143/176 (81%), Gaps = 3/176 (1%)

Query: 3   SSIACITHQPITXXXXXXXXXXXXXXXXXG--FLGIRRRVGCLRLTSSI-GPSNGSKATC 59
           +SI+CITH PIT                    FLG R+RVG   LTS I GPSNGSKATC
Sbjct: 2   ASISCITHHPITSKLNNAFSSPHVSASNLASRFLGTRKRVGLHSLTSRIIGPSNGSKATC 61

Query: 60  WFRFGKNGVDAEGAGIYGSQSRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQKIHPV 119
           WFRFGKNGVDA+GAGIYGSQ RDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQ IHPV
Sbjct: 62  WFRFGKNGVDAKGAGIYGSQGRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPV 121

Query: 120 DILLLLAASEGDMPKIEELLRAGAKYDVRDGDGRTALDRANDEVKDFILNFSVQRA 175
           DILLLLAASE D PKIEELLRAGAKYDV+D DGRTALDRA DE+KDFILNFSVQRA
Sbjct: 122 DILLLLAASESDKPKIEELLRAGAKYDVKDADGRTALDRATDEIKDFILNFSVQRA 177


>Glyma02g25260.1 
          Length = 181

 Score =  270 bits (690), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 138/180 (76%), Positives = 143/180 (79%), Gaps = 7/180 (3%)

Query: 3   SSIACITHQ--PITXXXXXXXXXXXXXXXXXG----FLGIRRRVGCLRLTSSI-GPSNGS 55
           +SI CITH   PIT                      FLG RRRVG   LTS I GPSNGS
Sbjct: 2   ASIPCITHHHHPITSNPNNNNAFPSPHVSASNLASRFLGTRRRVGSHSLTSRIIGPSNGS 61

Query: 56  KATCWFRFGKNGVDAEGAGIYGSQSRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQK 115
           K+TCWFRFGKNGVDA+GAGIYGSQ RDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQ 
Sbjct: 62  KSTCWFRFGKNGVDAQGAGIYGSQGRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQN 121

Query: 116 IHPVDILLLLAASEGDMPKIEELLRAGAKYDVRDGDGRTALDRANDEVKDFILNFSVQRA 175
           IHPVDILLLLAASEGD PKIEELLRAGAKYDV+D DGRTALDRA DE+KDFILNFSVQRA
Sbjct: 122 IHPVDILLLLAASEGDKPKIEELLRAGAKYDVKDADGRTALDRAADEIKDFILNFSVQRA 181


>Glyma09g15370.1 
          Length = 56

 Score =  112 bits (281), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 54/56 (96%), Positives = 54/56 (96%)

Query: 91  QYFNYMGMLAVEGTYDKMEALLSQKIHPVDILLLLAASEGDMPKIEELLRAGAKYD 146
           QYFNYMGMLAVEGTYDKMEALLSQ IHPVDILLLLAASEGD PKIEELLRAGAKYD
Sbjct: 1   QYFNYMGMLAVEGTYDKMEALLSQNIHPVDILLLLAASEGDKPKIEELLRAGAKYD 56