Miyakogusa Predicted Gene
- Lj6g3v0886400.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0886400.1 tr|G7J2D6|G7J2D6_MEDTR F-box/FBD/LRR-repeat
protein OS=Medicago truncatula GN=MTR_3g071850 PE=4
SV=1,36.79,3e-18,domain in FBox and BRCT domain containing pl,FBD;
FAMILY NOT NAMED,NULL; FBD,FBD,CUFF.58430.1
(200 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma08g46320.1 131 4e-31
Glyma08g46590.2 110 7e-25
Glyma18g35330.1 100 1e-21
Glyma18g35320.1 88 5e-18
Glyma17g05620.1 82 5e-16
Glyma18g35360.1 79 3e-15
Glyma08g46590.1 77 1e-14
Glyma18g35370.1 71 8e-13
Glyma13g43040.1 55 7e-08
>Glyma08g46320.1
Length = 379
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 117/205 (57%), Gaps = 8/205 (3%)
Query: 2 DLLDGCSALEDLEIFVISFHEYPEVLEIDDRNLPKLVKATVLFCGALYIPVKAFRNVQFL 61
+L C LEDL + F+ +V+E +PKLVKA + IP+K NV++L
Sbjct: 176 KVLHECPILEDLRANNMFFYNKSDVVEFQI--MPKLVKAEIKVNFRFEIPLKVASNVEYL 233
Query: 62 TLDECEDTD-IHVFPNLIHMEFFFNCSIKWSVVLDMLNHCPKLQTVVFELQIYDDNDEVW 120
DT+ VF NLIH+E F ++W++V +M+ HCPKLQT V L + VW
Sbjct: 234 RFFIKPDTECFPVFHNLIHLEVSFWFVVRWNLVFEMIKHCPKLQTFVLFLPLESFPPMVW 293
Query: 121 PDPGFVPECFSSHLNKCYIKGYTGEECQMRFVRYVMQNSTSLRTMIICSR-----YDQNH 175
P VPEC SS L +C I Y G++ +++F +Y++QNS +L++M I ++ Y N
Sbjct: 294 TFPQIVPECISSKLRRCTIMNYKGKKYELQFAKYILQNSRALQSMTIHNKRVRNTYFANP 353
Query: 176 ERRLEVITELASYTRSSAVCELLFK 200
+ ++ ++ ELA +SS C++LFK
Sbjct: 354 QDKIRILQELAMCPKSSTTCKILFK 378
>Glyma08g46590.2
Length = 380
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 110/209 (52%), Gaps = 19/209 (9%)
Query: 2 DLLDGCSALEDLEIFVISFHEYPEVLEIDDRNLPKLVKATVLFCGALYIPVKAFRNVQFL 61
+LL G LE ++ H Y E LPKL++AT+ F ++P++ NVQFL
Sbjct: 178 ELLRGSPNLE----YLFVGHMYFSGPEARFERLPKLLRATIAFG---HVPLEVVNNVQFL 230
Query: 62 TLDECEDTD----IHVFPNLIHMEFFFN-CSIKWSVVLDMLNHCPKLQTV-----VFELQ 111
+D E + I F NL H+E ++ C+ W VL+++ CP LQ + ++
Sbjct: 231 RIDWMEHKEEANLIPEFQNLTHLELGYSECTRDWVDVLEVIQRCPNLQILDIDMGSIDMT 290
Query: 112 IYDDNDEVWPDPGFVPECFSSHLNKCYIKGYTGEECQMRFVRYVMQNSTSLRTMIICSRY 171
DD WP P VP S HL C+I+ Y G + ++RF RY+M+N+ LRTM I +
Sbjct: 291 TRDDEGADWPFPRSVPSSISLHLKTCFIRCYGGSKGELRFARYIMRNARHLRTMKISTYA 350
Query: 172 DQNHERRLEVITELASYTRSSAVCELLFK 200
+ +++ ++ +L+ R S +C+L FK
Sbjct: 351 SR--QQKFNMLKKLSLCPRRSRICKLSFK 377
>Glyma18g35330.1
Length = 342
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 103/201 (51%), Gaps = 13/201 (6%)
Query: 1 MDLLDGCSALEDL---EIFVISFHEYPEVLEIDDRNLPKLVKATVLFCGALYIPVKAFRN 57
+ +L C LEDL + V + E LE +PKLVKA + ++ + + F N
Sbjct: 146 LQILSACPLLEDLLIRSLHVTNNFSSDEHLE----RMPKLVKADI-SNASIDVQMATFYN 200
Query: 58 VQFLTLDECED---TDIHVFPNLIHMEFFFNCSIK-WSVVLDMLNHCPKLQTVVF-ELQI 112
V+FL D + H F NL HME F ++++L+ CP LQ +V E +
Sbjct: 201 VEFLRTQVGSDFFSDNKHTFLNLTHMELIFRFRFNVLGRLINLLHECPNLQILVVDEGNL 260
Query: 113 YDDNDEVWPDPGFVPECFSSHLNKCYIKGYTGEECQMRFVRYVMQNSTSLRTMIICSRYD 172
+ P FVP+C S+ L +C +K Y G+E ++RF RYV+QN+ L +M I S
Sbjct: 261 FVKTSSDVSYPQFVPKCLSTQLKRCCVKKYGGQESELRFARYVLQNARVLYSMTIYSISS 320
Query: 173 QNHERRLEVITELASYTRSSA 193
N RL++I +L+S R SA
Sbjct: 321 SNSGERLQMIKKLSSCPRISA 341
>Glyma18g35320.1
Length = 345
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 85/164 (51%), Gaps = 21/164 (12%)
Query: 51 PVKAFRNVQFLTLDECEDTDIHVFP----------NLIHMEFFFNCSIKWSV-VLDMLNH 99
P++ NVQFL ++ + F NL H+EFF S + VLD++
Sbjct: 189 PLEVVDNVQFLRINWVLIISVRFFKDHNGFTSEFQNLTHLEFF---SYRGGFFVLDLIKR 245
Query: 100 CPKLQTVVFELQIYDDNDEVWPD---PGFVPECFSSHLNKCYIKGYTGEECQMRFVRYVM 156
CPKLQ L IY + ++ + P VP C S HL C +K Y G + + RFV Y+M
Sbjct: 246 CPKLQI----LTIYKVDSALFAEGDYPQSVPICISFHLKICTLKRYNGSKDEFRFVTYIM 301
Query: 157 QNSTSLRTMIICSRYDQNHERRLEVITELASYTRSSAVCELLFK 200
+NS L+ M I D N ER+LE+ +L+ TR S C+LLF+
Sbjct: 302 ENSKYLQIMTISCNSDINKERKLEMFQKLSLCTRCSTSCKLLFE 345
>Glyma17g05620.1
Length = 158
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
Query: 94 LDMLNHCPKLQTVV-FELQIYDDNDEVWPDPGFVPECFSSHLNKCYIKGYTGEECQMRFV 152
L L HC + +++ + + W P +P C S HL C + Y G + + +F
Sbjct: 51 LKRLRHCVRSSRYSPADVKAWLADAAYWSYPQSIPTCVSLHLKTCRLTNYVGSKGEFQFA 110
Query: 153 RYVMQNSTSLRTMIICSRYDQNHERRLEVITELASYTRSSAVCELLFK 200
RY+MQN++ L+TM IC+ N +LE+I L+S TR SA C+LLFK
Sbjct: 111 RYIMQNASHLQTMTICTNTSSNEGEKLEMIENLSSCTRCSATCKLLFK 158
>Glyma18g35360.1
Length = 357
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 88/199 (44%), Gaps = 28/199 (14%)
Query: 1 MDLLDGCSALEDLEIFVISFHEYPEVLEIDDRNLPKLVKATVLFCGALYIPVKAFRNVQF 60
+++L C LEDL F+ S ++ T +C I + NV+F
Sbjct: 143 VEILAACPVLEDL--FISS------------------LRVTSSYCHGACIQLPTLSNVKF 182
Query: 61 LTLDECEDTDIHV----FPNLIHMEFFFNCSIKWSVVLDMLNHCPKLQTVVFELQIY--- 113
L D + V F NL ++E + W +L +L+ CP LQ +V +
Sbjct: 183 LRTDVVQLRTTFVGLFTFVNLTYLELIVDAHY-WDWLLKLLHCCPNLQILVIDKGNSFNK 241
Query: 114 DDNDEVWPDPGFVPECFSSHLNKCYIKGYTGEECQMRFVRYVMQNSTSLRTMIICSRYDQ 173
NDE W VP+C SS L C + Y G EC+ +F RY+MQN+ +L ICS
Sbjct: 242 TSNDENWVYSHLVPKCLSSKLKTCRFQKYEGWECEFQFARYIMQNARALCAFTICSTGFS 301
Query: 174 NHERRLEVITELASYTRSS 192
+ ++I L+S R S
Sbjct: 302 PLAAKFQMIKRLSSCPRIS 320
>Glyma08g46590.1
Length = 515
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 17/155 (10%)
Query: 2 DLLDGCSALEDLEIFVISFHEYPEVLEIDDRNLPKLVKATVLFCGALYIPVKAFRNVQFL 61
+LL G LE ++ H Y E LPKL++AT+ F ++P++ NVQFL
Sbjct: 356 ELLRGSPNLE----YLFVGHMYFSGPEARFERLPKLLRATIAFG---HVPLEVVNNVQFL 408
Query: 62 TLDECEDTD----IHVFPNLIHMEFFFN-CSIKWSVVLDMLNHCPKLQTV-----VFELQ 111
+D E + I F NL H+E ++ C+ W VL+++ CP LQ + ++
Sbjct: 409 RIDWMEHKEEANLIPEFQNLTHLELGYSECTRDWVDVLEVIQRCPNLQILDIDMGSIDMT 468
Query: 112 IYDDNDEVWPDPGFVPECFSSHLNKCYIKGYTGEE 146
DD WP P VP S HL C+I+ Y G +
Sbjct: 469 TRDDEGADWPFPRSVPSSISLHLKTCFIRCYGGSK 503
>Glyma18g35370.1
Length = 409
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 24/220 (10%)
Query: 1 MDLLDGCSALEDLEIFVISFHEYPEVLEIDDRN----LPKLVKATVLFC------GALYI 50
+ LL GC ALEDL + ++++ + + N L L A + F ++ +
Sbjct: 192 VKLLAGCPALEDL-VLESTYNDACGGVVCAEGNFQLDLKHLSSAKIGFSWKERCLKSMLL 250
Query: 51 PVKAFRNVQFLTLD--------ECEDTDIHVFPNLIHMEFFFNCSIKWSVVLDMLNHCPK 102
+A NV+ L+L +DI VF LI +E F + W ++ +L K
Sbjct: 251 IFRALSNVRCLSLSTSTVACLKHASTSDIPVFDKLIQLEISFG-NYSWDLLASLLQRSHK 309
Query: 103 LQ--TVVFELQIYDDNDEV-WPDPGFVPECFSSHLNKCYIKGYTGEECQMRFVRYVMQNS 159
L+ T+ E Q Y E W P VPEC HL ++ Y G E ++ FV Y+MQN+
Sbjct: 310 LEVLTIYKEPQKYAKGQEPRWIHPLLVPECLL-HLKTFCLREYQGLETELDFVGYIMQNA 368
Query: 160 TSLRTMIICSRYDQNHERRLEVITELASYTRSSAVCELLF 199
L TM I E +L++ L+ R+ C+++F
Sbjct: 369 RVLETMTIYISSSLGSEEKLQIRRHLSILQRNFETCQIVF 408
>Glyma13g43040.1
Length = 248
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 2 DLLDGCSALEDLEIFVISFHEYPEVLEIDDRNLPKLVKATVLFCGALYIPVKAFRNVQFL 61
+LL GC LED+E+ + +E + LPKLV+A + IP++ NVQFL
Sbjct: 103 ELLSGCPNLEDMELKYLG--STSNAIEAKFKKLPKLVRAVM---NKDQIPLEVVHNVQFL 157
Query: 62 TLD---ECEDTDIHVFPNLIHMEFFFN-CSIKWSVVLDMLNHCPKLQTVVFE 109
++ + + I F NL +EF ++ + W VL +L HCP LQ +V +
Sbjct: 158 RINWRVKINEDLIPEFHNLTRIEFSYSEHNRNWMEVLKVLKHCPNLQHLVID 209