Miyakogusa Predicted Gene

Lj6g3v0871230.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0871230.1 Non Chatacterized Hit- tr|I3T1Z7|I3T1Z7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,40.54,0.000000008, ,CUFF.58417.1
         (181 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g11890.1                                                       128   4e-30

>Glyma18g11890.1 
          Length = 577

 Score =  128 bits (321), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 84/189 (44%), Positives = 103/189 (54%), Gaps = 15/189 (7%)

Query: 1   MQFKMDQDIPGVVSPCNKDPWMSYSQPIMNINLCTALCS-SQPKVTSRY-NWWKQLN--S 56
           MQF MDQDIPG+++  N +PW+SYSQP+M+ NL TALC+  QP VTSRY  WWKQ N  S
Sbjct: 396 MQFGMDQDIPGMLAHYNDNPWISYSQPVMDTNLYTALCACHQPNVTSRYYRWWKQSNPKS 455

Query: 57  GKEGDAMKGYDRCLISKNSSQHMSPALTREVKYELSFGPLPD----FTCKFGTCQVGNSG 112
           G       G+   + +K            + + +LS   L D      C           
Sbjct: 456 GGSYGPPPGFTSKINAKQEKDF-------DEEGKLSIIELSDSSNEVRCLASVEGARTVK 508

Query: 113 DNADESKITDRFYVRNSVNDMEGEGVSSCTVGEAFNLKNRICMLERLIAKLKAAKFGSKV 172
           DN +E KI   F  RN VND EGE  S      A NL++RI  LER+IAKLKAAKFG KV
Sbjct: 509 DNGNEVKIEHSFCDRNDVNDKEGEDASHRIANIASNLESRIWKLERVIAKLKAAKFGHKV 568

Query: 173 ETIVAIANP 181
           + I   A P
Sbjct: 569 QNIGVKAEP 577