Miyakogusa Predicted Gene

Lj6g3v0871220.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0871220.1 CUFF.58420.1
         (108 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g42890.1                                                       144   2e-35
Glyma18g10960.1                                                       130   3e-31

>Glyma08g42890.1 
          Length = 182

 Score =  144 bits (363), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 79/108 (73%), Positives = 82/108 (75%), Gaps = 1/108 (0%)

Query: 1   MMELEARREQVRQNVALLXXXXXXXXXXXGSTGKRVSTGKVSGPDLKSFVQQLRDPSEGV 60
           MMELEARRE VRQNVALL           GS GKRVSTGKVSGPDLKSF+QQ   PSEG 
Sbjct: 76  MMELEARRECVRQNVALLKKEEERIAKE-GSKGKRVSTGKVSGPDLKSFIQQFPVPSEGK 134

Query: 61  KVEESSGAMDGLRDSQDNAGEKEKVELESSEPTGSGPSFRPGTWQPPT 108
           +VEES  AMDGLR+ QD   EKEK E ESSEPTGSG SFRPGTWQPPT
Sbjct: 135 EVEESPSAMDGLRNPQDGLAEKEKDESESSEPTGSGASFRPGTWQPPT 182


>Glyma18g10960.1 
          Length = 181

 Score =  130 bits (327), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 72/108 (66%), Positives = 79/108 (73%), Gaps = 2/108 (1%)

Query: 1   MMELEARREQVRQNVALLXXXXXXXXXXXGSTGKRVSTGKVSGPDLKSFVQQLRDPSEGV 60
           MMELEARRE+VRQNVA+L           GS GKRVSTGKVSGPDLKSF+QQL  P    
Sbjct: 76  MMELEARRERVRQNVAVLKKEEEERITKEGSKGKRVSTGKVSGPDLKSFIQQL--PVSSE 133

Query: 61  KVEESSGAMDGLRDSQDNAGEKEKVELESSEPTGSGPSFRPGTWQPPT 108
           +VEE   AM GLR+ Q++  EKEK E  SSEPTGSG SFRPGTWQPPT
Sbjct: 134 EVEEPPSAMGGLRNPQESLAEKEKDESGSSEPTGSGASFRPGTWQPPT 181