Miyakogusa Predicted Gene

Lj6g3v0855550.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0855550.1 Non Chatacterized Hit- tr|K4B9W3|K4B9W3_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,36.59,3e-19,seg,NULL; Stig1,Stigma-specific protein
Stig1,CUFF.58395.1
         (168 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g10360.1                                                       154   4e-38
Glyma08g43240.1                                                       124   5e-29
Glyma09g00860.1                                                        54   8e-08

>Glyma18g10360.1 
          Length = 154

 Score =  154 bits (389), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 88/168 (52%), Positives = 102/168 (60%), Gaps = 14/168 (8%)

Query: 1   MGFLKAIFVITITMALSIAALVTMKNITTTKEESAKPFLPSDSQPLMAHEKNTLLPSKRV 60
           MGFLKAIF+I ITMALSI   +TMK IT  +EE+  PF+  D      H+KN LLPSKRV
Sbjct: 1   MGFLKAIFIIAITMALSIT--LTMKTITH-QEEAKPPFVHHDLPSSTPHQKNLLLPSKRV 57

Query: 61  SRFLAQKPAYPYPYPDASNYPVVHCQKDNEIXXXXXXXXXXXXXXXXXXMDVSYDKHNCG 120
           SRFLAQ        P+A++    HC+KD+EI                  +DV YDKHNCG
Sbjct: 58  SRFLAQ-----VKNPNAAD----HCRKDHEICTLSGVKNSTCCNNKC--IDVGYDKHNCG 106

Query: 121 AXXXXXXXXXXXXRGQCVDINFDKRHCGGCNNRCETGQYCTYGMCGYA 168
           A            RG+CVD NFDKRHCG CN+RCE G YC YGMCGYA
Sbjct: 107 ACKMKCKFTEVCCRGECVDTNFDKRHCGECNHRCEVGAYCVYGMCGYA 154


>Glyma08g43240.1 
          Length = 134

 Score =  124 bits (311), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 78/168 (46%), Positives = 89/168 (52%), Gaps = 34/168 (20%)

Query: 1   MGFLKAIFVITITMALSIAALVTMKNITTTKEESAKPFLPSDSQPLMAHEKNTLLPSKRV 60
           MGFLKAIFVI ITMALSIA  +TMK IT   +E AKP                     RV
Sbjct: 1   MGFLKAIFVIAITMALSIA--LTMKTIT--HQEEAKPAF-------------------RV 37

Query: 61  SRFLAQKPAYPYPYPDASNYPVVHCQKDNEIXXXXXXXXXXXXXXXXXXMDVSYDKHNCG 120
           SRFLAQ        P+A++    HC KD+E+                  +DV YD HNCG
Sbjct: 38  SRFLAQ-----VKNPNAAD----HCHKDHEVCTLVGAKNSTCCNNKC--IDVGYDYHNCG 86

Query: 121 AXXXXXXXXXXXXRGQCVDINFDKRHCGGCNNRCETGQYCTYGMCGYA 168
           A            RG+CV+ NFDKRHCG CN+RCE G YC YGMCGYA
Sbjct: 87  ACKMKCKLTDACCRGECVNTNFDKRHCGECNHRCEVGAYCVYGMCGYA 134


>Glyma09g00860.1 
          Length = 131

 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 34/59 (57%)

Query: 110 MDVSYDKHNCGAXXXXXXXXXXXXRGQCVDINFDKRHCGGCNNRCETGQYCTYGMCGYA 168
           ++VS D++NCG             +G+CV+  FDK HCG C N+C  G  C +G+C YA
Sbjct: 73  VNVSNDRNNCGMCGKRCKYSQVCCKGKCVNPMFDKHHCGKCGNKCNKGDACVFGLCSYA 131