Miyakogusa Predicted Gene

Lj6g3v0831440.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0831440.2 Non Chatacterized Hit- tr|I3MIC5|I3MIC5_SPETR
Uncharacterized protein (Fragment) OS=Spermophilus
tri,33.04,2e-18,ZF_C3H1,Zinc finger, CCCH-type; G_PATCH,G-patch
domain; G-patch,G-patch domain; seg,NULL; coiled-coi,CUFF.58390.2
         (495 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g10210.1                                                       716   0.0  
Glyma08g43320.1                                                       706   0.0  
Glyma04g11430.1                                                       221   1e-57
Glyma17g11300.1                                                        58   3e-08
Glyma17g11300.2                                                        58   3e-08
Glyma17g11300.3                                                        57   4e-08
Glyma13g22490.1                                                        55   1e-07

>Glyma18g10210.1 
          Length = 492

 Score =  716 bits (1847), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/469 (75%), Positives = 383/469 (81%), Gaps = 2/469 (0%)

Query: 27  AIDEALLSDPTNSELVAVHEELVQAIKDAEEGLLHLKRARLLQEVDSVLHNTNMFTEEEK 86
           AI +ALLSDPTN EL+AVHEELVQAIKDAEEGLLHLKRARLLQE DSVLHNTN+FTEEEK
Sbjct: 26  AIGQALLSDPTNPELLAVHEELVQAIKDAEEGLLHLKRARLLQEADSVLHNTNIFTEEEK 85

Query: 87  VEPLDPTDVEPEPLEEKSYSIGSKCRFRHKDGRWYNGQVVQLDNSVAKISFLTPTSENML 146
           VEPLD TDVEPEPLE+K YS+GSKCRFRHKDGRWYNGQVVQLDN+VAK+SFLTPTSENML
Sbjct: 86  VEPLDSTDVEPEPLEDKCYSVGSKCRFRHKDGRWYNGQVVQLDNAVAKVSFLTPTSENML 145

Query: 147 MCKFFLQHRCRFGANCRQSHGVDVQLSSLKRYVPTIWKPSLVGSSIWALSDAKTGIWREA 206
           MCKFFLQ RCRFG+NCR SHG+DVQLS+LK+YVPTIWK SLVGSSIWA+S A  G WREA
Sbjct: 146 MCKFFLQQRCRFGSNCRLSHGLDVQLSALKKYVPTIWKQSLVGSSIWAVSTANAGTWREA 205

Query: 207 ELELWDEKAGVGQVVFRDSGSSMKLCAEEIVLSEYAEVXXXXXXXXXXXXXXXXXXXXXX 266
           ELE  DEKAGVGQVVFRD+GSS+K+ AEE+ LSE+AE+                      
Sbjct: 206 ELESLDEKAGVGQVVFRDNGSSVKVGAEEMALSEHAEMSDLESDSSLVQSDSSDYEEEEP 265

Query: 267 XGLGFLESTNLQKGIQTDTALFAKWENHTRGIASKMMANMGFREGMGLGVTGQGMLDPIP 326
            GLGFLESTNL++GIQT+TA FA WENHTRGIASKMMANMG+REGMGLGVTGQGMLDPIP
Sbjct: 266 QGLGFLESTNLRRGIQTETATFATWENHTRGIASKMMANMGYREGMGLGVTGQGMLDPIP 325

Query: 327 VKVLPPKQSLDHALDSRXXXXXXXXXXXXXXXXXXXXXXXXFAEANRTAKEEEESAPDVF 386
           VKVLPPKQSLDHAL+S                         FAE NR AKEEEESA DVF
Sbjct: 326 VKVLPPKQSLDHALESH--KREGKEGKKKRSRGGKRKREKKFAEVNRAAKEEEESASDVF 383

Query: 387 TLINNQLAMHGEASNGGSMKKQQSKDSGEVKKVDRKVLVAYEDEVKGLKMRVAKLEQMVN 446
            LINN LAMH EA   GSMKKQQSK S E KKVDR+ LVAYE+EVK LKMRV KLE +VN
Sbjct: 384 ALINNHLAMHSEAFGSGSMKKQQSKGSEEGKKVDRRALVAYEEEVKDLKMRVEKLEHIVN 443

Query: 447 ANKKEKAVYEAAMRKLVETRKALAEAESVHASASNTVVGKEKEKRWLKF 495
           AN+KEKAVYE AMRKL ETRKALA+AE+VHASASN+V  KEKEKRWLKF
Sbjct: 444 ANRKEKAVYEGAMRKLNETRKALADAEAVHASASNSVTSKEKEKRWLKF 492


>Glyma08g43320.1 
          Length = 495

 Score =  706 bits (1822), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/471 (74%), Positives = 384/471 (81%), Gaps = 3/471 (0%)

Query: 27  AIDEALLSDPTNSELVAVHEELVQAIKDAEEGLLHLKRARLLQEVDSVLHNTNMFTEEEK 86
           AID+ALLSDPT+ EL+AVHEELVQAIKDAEEGLLHLKRARLLQE DSVLHNTN+FTEE K
Sbjct: 26  AIDQALLSDPTDPELLAVHEELVQAIKDAEEGLLHLKRARLLQEADSVLHNTNIFTEE-K 84

Query: 87  VEPLDPTDVEPEPLEEKSYSIGSKCRFRHKDGRWYNGQVVQLDNSVAKISFLTPTSENML 146
           V+PLDPT VEPEPLE+K YS+GSKCRFRHKDGRWYNGQVVQLDNSVAK+SFLTPTSENML
Sbjct: 85  VDPLDPTYVEPEPLEDKCYSVGSKCRFRHKDGRWYNGQVVQLDNSVAKVSFLTPTSENML 144

Query: 147 MCKFFLQHRCRFGANCRQSHGVDVQLSSLKRYVPTIWKPSLVGSSIWALSDAKTGIWREA 206
           MCKFFLQ RCRFG+NCR SHG+DVQLS+LK+YVPTIWK SLVGSSIWA+S A  G WREA
Sbjct: 145 MCKFFLQQRCRFGSNCRLSHGLDVQLSALKKYVPTIWKQSLVGSSIWAVSTANAGTWREA 204

Query: 207 ELELWDEKAGVGQVVFRDSGSSMKLCAEEIVLSEYAEVXX-XXXXXXXXXXXXXXXXXXX 265
           EL+ WDEKAGVGQVVFRD GSS+KL AEE+ LSE+AE+                      
Sbjct: 205 ELKSWDEKAGVGQVVFRDDGSSVKLGAEEMALSEHAEMSDIESDSSLDQSDSSDYEEEEE 264

Query: 266 XXGLGFLESTNLQKGIQTDTALFAKWENHTRGIASKMMANMGFREGMGLGVTGQGMLDPI 325
             G+GFLESTNLQ+GIQT+TA FA WENHTRGIASKMMANMG+REGMGLGVTGQGMLDPI
Sbjct: 265 SQGIGFLESTNLQRGIQTETATFATWENHTRGIASKMMANMGYREGMGLGVTGQGMLDPI 324

Query: 326 PVKVLPPKQSLDHALDS-RXXXXXXXXXXXXXXXXXXXXXXXXFAEANRTAKEEEESAPD 384
            VKVLPPKQSLDHAL+S +                        FAEANR AKEEEESA D
Sbjct: 325 AVKVLPPKQSLDHALESHKREENKEKQGKKKQSRGGKRKREKKFAEANRAAKEEEESASD 384

Query: 385 VFTLINNQLAMHGEASNGGSMKKQQSKDSGEVKKVDRKVLVAYEDEVKGLKMRVAKLEQM 444
           VF LINN LAMH EA  GG MKKQQSK S E KKVDR+ LVAYE+EVK LK+RV KLE +
Sbjct: 385 VFALINNHLAMHNEAFGGGLMKKQQSKGSEEGKKVDRRALVAYEEEVKDLKIRVEKLEHI 444

Query: 445 VNANKKEKAVYEAAMRKLVETRKALAEAESVHASASNTVVGKEKEKRWLKF 495
           VNAN+KEKAVYE AMRKL ETRKALA+AE+VHASASN+V  KEKEKRWLKF
Sbjct: 445 VNANRKEKAVYEGAMRKLNETRKALADAEAVHASASNSVTSKEKEKRWLKF 495


>Glyma04g11430.1 
          Length = 168

 Score =  221 bits (563), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 118/184 (64%), Positives = 133/184 (72%), Gaps = 16/184 (8%)

Query: 312 MGLGVTGQGMLDPIPVKVLPPKQSLDHALDSRXXXXXXXXXXXXXXXXXXXXXXXXFAEA 371
           MGLG+TGQGMLDPI VKVLPPKQSLD+ALD                          FA+A
Sbjct: 1   MGLGITGQGMLDPIAVKVLPPKQSLDYALDR----------------GGKRKREKKFAKA 44

Query: 372 NRTAKEEEESAPDVFTLINNQLAMHGEASNGGSMKKQQSKDSGEVKKVDRKVLVAYEDEV 431
           NR  KE+EES  DVF LINN LA+H +A  GGSMKK+QSK S E KKVDR+ LVAYE++V
Sbjct: 45  NRATKEDEESPSDVFALINNHLALHNKAFGGGSMKKRQSKASEEGKKVDRRALVAYEEKV 104

Query: 432 KGLKMRVAKLEQMVNANKKEKAVYEAAMRKLVETRKALAEAESVHASASNTVVGKEKEKR 491
           K LK+RV KLE +VNAN+KEKA+Y+ AMRKL ETRK LA AE VHASASN V  KEKEKR
Sbjct: 105 KDLKIRVEKLEHIVNANRKEKAMYKGAMRKLNETRKPLAYAEEVHASASNLVTSKEKEKR 164

Query: 492 WLKF 495
           WLKF
Sbjct: 165 WLKF 168


>Glyma17g11300.1 
          Length = 456

 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/59 (52%), Positives = 36/59 (61%), Gaps = 2/59 (3%)

Query: 273 ESTNLQKGIQTDTALFAKWENHTRGIASKMMANMGFREGMGLGVTGQGMLDPIPVKVLP 331
           E TN +KG+ T +A    +E HT G  SKMMA MG+ EG GLG  GQGM  PI V   P
Sbjct: 298 EETN-RKGV-TSSANIGSFEEHTTGFGSKMMAKMGYTEGAGLGKNGQGMAQPIEVIQRP 354



 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 37/69 (53%)

Query: 268 GLGFLESTNLQKGIQTDTALFAKWENHTRGIASKMMANMGFREGMGLGVTGQGMLDPIPV 327
           GLG   S +  +  +  ++    +E HT+G  SKMMA MGF EG GLG   QG+  P+  
Sbjct: 384 GLGVEFSNSPAEPARNKSSKVGSFEKHTKGFGSKMMAKMGFVEGNGLGRESQGITTPLSA 443

Query: 328 KVLPPKQSL 336
             LP  + L
Sbjct: 444 VRLPKSRGL 452


>Glyma17g11300.2 
          Length = 305

 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/59 (52%), Positives = 36/59 (61%), Gaps = 2/59 (3%)

Query: 273 ESTNLQKGIQTDTALFAKWENHTRGIASKMMANMGFREGMGLGVTGQGMLDPIPVKVLP 331
           E TN +KG+ T +A    +E HT G  SKMMA MG+ EG GLG  GQGM  PI V   P
Sbjct: 147 EETN-RKGV-TSSANIGSFEEHTTGFGSKMMAKMGYTEGAGLGKNGQGMAQPIEVIQRP 203



 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 37/69 (53%)

Query: 268 GLGFLESTNLQKGIQTDTALFAKWENHTRGIASKMMANMGFREGMGLGVTGQGMLDPIPV 327
           GLG   S +  +  +  ++    +E HT+G  SKMMA MGF EG GLG   QG+  P+  
Sbjct: 233 GLGVEFSNSPAEPARNKSSKVGSFEKHTKGFGSKMMAKMGFVEGNGLGRESQGITTPLSA 292

Query: 328 KVLPPKQSL 336
             LP  + L
Sbjct: 293 VRLPKSRGL 301


>Glyma17g11300.3 
          Length = 423

 Score = 57.4 bits (137), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/59 (52%), Positives = 36/59 (61%), Gaps = 2/59 (3%)

Query: 273 ESTNLQKGIQTDTALFAKWENHTRGIASKMMANMGFREGMGLGVTGQGMLDPIPVKVLP 331
           E TN +KG+ T +A    +E HT G  SKMMA MG+ EG GLG  GQGM  PI V   P
Sbjct: 265 EETN-RKGV-TSSANIGSFEEHTTGFGSKMMAKMGYTEGAGLGKNGQGMAQPIEVIQRP 321



 Score = 51.2 bits (121), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 37/69 (53%)

Query: 268 GLGFLESTNLQKGIQTDTALFAKWENHTRGIASKMMANMGFREGMGLGVTGQGMLDPIPV 327
           GLG   S +  +  +  ++    +E HT+G  SKMMA MGF EG GLG   QG+  P+  
Sbjct: 351 GLGVEFSNSPAEPARNKSSKVGSFEKHTKGFGSKMMAKMGFVEGNGLGRESQGITTPLSA 410

Query: 328 KVLPPKQSL 336
             LP  + L
Sbjct: 411 VRLPKSRGL 419


>Glyma13g22490.1 
          Length = 762

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/49 (53%), Positives = 29/49 (59%)

Query: 283 TDTALFAKWENHTRGIASKMMANMGFREGMGLGVTGQGMLDPIPVKVLP 331
           T +A    +E HT G  SKMMA MG+ EG GLG  GQGM  PI V   P
Sbjct: 612 TSSANIGSFEEHTTGFGSKMMAKMGYTEGAGLGKNGQGMAQPIEVIQRP 660



 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 36/69 (52%)

Query: 268 GLGFLESTNLQKGIQTDTALFAKWENHTRGIASKMMANMGFREGMGLGVTGQGMLDPIPV 327
           G+G   S +  K     ++    +E HT+G  SKMMA MGF EG GLG   QG+  P+  
Sbjct: 690 GVGVEFSNSPAKPAPNKSSNVGAFEKHTKGFGSKMMAKMGFVEGTGLGRESQGITTPLSA 749

Query: 328 KVLPPKQSL 336
             LP  + L
Sbjct: 750 VRLPKSRGL 758