Miyakogusa Predicted Gene

Lj6g3v0820200.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0820200.1 Non Chatacterized Hit- tr|C6TJB4|C6TJB4_SOYBN
Putative uncharacterized protein OS=Glycine max PE=4
S,93.88,2e-18,SWIB,SWIB/MDM2 domain; SUBFAMILY NOT NAMED,NULL; BRG-1
ASSOCIATED FACTOR 60 (BAF60),NULL; SWIB/MDM2 ,CUFF.58365.1
         (100 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g43410.1                                                       187   2e-48
Glyma18g10140.1                                                       185   8e-48
Glyma11g00300.2                                                        80   5e-16
Glyma11g00300.1                                                        80   6e-16
Glyma01g45430.1                                                        79   1e-15
Glyma11g09580.1                                                        75   2e-14
Glyma01g35780.1                                                        73   6e-14
Glyma11g06240.1                                                        54   3e-08
Glyma01g39030.1                                                        53   6e-08
Glyma01g39030.2                                                        49   9e-07
Glyma08g43590.2                                                        48   3e-06
Glyma08g43590.1                                                        48   3e-06
Glyma17g01230.1                                                        48   3e-06
Glyma07g39530.1                                                        47   5e-06

>Glyma08g43410.1 
          Length = 100

 Score =  187 bits (475), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 92/100 (92%), Positives = 96/100 (96%)

Query: 1   MLPQRMKKAITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFMRVWSYIKTNNLQDP 60
           MLPQRMKKAITDNPKKLANLIDLVNLPSTLR+FVGQSQISRLGCF  +WSYIKTNNLQD 
Sbjct: 1   MLPQRMKKAITDNPKKLANLIDLVNLPSTLREFVGQSQISRLGCFKCIWSYIKTNNLQDQ 60

Query: 61  NNKNVVNCDEKLKSILLGKPQVELAELPSLIKLHFPKESK 100
           NNKNVVNCDEKLKSILLGKPQVELAELP+LIK+HFPKE K
Sbjct: 61  NNKNVVNCDEKLKSILLGKPQVELAELPALIKMHFPKEPK 100


>Glyma18g10140.1 
          Length = 100

 Score =  185 bits (470), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 92/100 (92%), Positives = 95/100 (95%)

Query: 1   MLPQRMKKAITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFMRVWSYIKTNNLQDP 60
           MLPQRMKKAITDNPKKLANLIDLVNLPSTLR+FVGQSQISRLGCF  VW YIKTNNLQD 
Sbjct: 1   MLPQRMKKAITDNPKKLANLIDLVNLPSTLREFVGQSQISRLGCFKCVWFYIKTNNLQDQ 60

Query: 61  NNKNVVNCDEKLKSILLGKPQVELAELPSLIKLHFPKESK 100
           NNKNVVNCDEKLKSILLGKPQVELAELP+LIK+HFPKE K
Sbjct: 61  NNKNVVNCDEKLKSILLGKPQVELAELPALIKMHFPKEPK 100


>Glyma11g00300.2 
          Length = 118

 Score = 80.1 bits (196), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 51/83 (61%)

Query: 15  KKLANLIDLVNLPSTLRDFVGQSQISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDEKLKS 74
           +K+  ++    +   + D VG  +++R     R+W+YIK NNLQDP +K  +NCDEKLK 
Sbjct: 31  RKIRGIMKPRKVSPEMEDLVGAPEMARTQVLKRIWAYIKDNNLQDPTDKRTINCDEKLKK 90

Query: 75  ILLGKPQVELAELPSLIKLHFPK 97
           +  GK QVE+ E+  LI  HF K
Sbjct: 91  VFAGKDQVEMLEIARLISPHFLK 113


>Glyma11g00300.1 
          Length = 148

 Score = 79.7 bits (195), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 50/81 (61%)

Query: 15  KKLANLIDLVNLPSTLRDFVGQSQISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDEKLKS 74
           +K+  ++    +   + D VG  +++R     R+W+YIK NNLQDP +K  +NCDEKLK 
Sbjct: 61  RKIRGIMKPRKVSPEMEDLVGAPEMARTQVLKRIWAYIKDNNLQDPTDKRTINCDEKLKK 120

Query: 75  ILLGKPQVELAELPSLIKLHF 95
           +  GK QVE+ E+  LI  HF
Sbjct: 121 VFAGKDQVEMLEIARLISPHF 141


>Glyma01g45430.1 
          Length = 158

 Score = 79.0 bits (193), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 34/68 (50%), Positives = 45/68 (66%)

Query: 30  LRDFVGQSQISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDEKLKSILLGKPQVELAELPS 89
           + D VG  +++R     R+W+YIK NNLQDP +K  +NCDEKLK +  GK QVE+ E+  
Sbjct: 86  MEDLVGAPEMARTQVLKRIWAYIKDNNLQDPTDKRTINCDEKLKKVFAGKDQVEMLEIAR 145

Query: 90  LIKLHFPK 97
           LI  HF K
Sbjct: 146 LISPHFLK 153


>Glyma11g09580.1 
          Length = 132

 Score = 74.7 bits (182), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 35/77 (45%), Positives = 47/77 (61%)

Query: 23  LVNLPSTLRDFVGQSQISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDEKLKSILLGKPQV 82
           +V + S L DF+G  Q+SR     +VW+YIK  NLQ+P NK  + CDEKLK+I  GK +V
Sbjct: 56  VVPVSSELGDFLGAPQVSRTDAVKKVWAYIKLQNLQNPANKKEIFCDEKLKTIFEGKDKV 115

Query: 83  ELAELPSLIKLHFPKES 99
              E+  L+  HF K  
Sbjct: 116 GFTEIAKLLSSHFVKSG 132


>Glyma01g35780.1 
          Length = 132

 Score = 73.2 bits (178), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 35/75 (46%), Positives = 47/75 (62%)

Query: 23  LVNLPSTLRDFVGQSQISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDEKLKSILLGKPQV 82
           +V + S L DF+G  Q+SR     +VW+YIK  NLQ+P NK  + CDEKLK+I  GK +V
Sbjct: 56  VVPVSSELGDFLGAPQVSRTEAVKKVWAYIKLQNLQNPANKKEIFCDEKLKTIFEGKDKV 115

Query: 83  ELAELPSLIKLHFPK 97
              E+  L+  HF K
Sbjct: 116 GFTEIAKLLSNHFVK 130


>Glyma11g06240.1 
          Length = 346

 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 39/62 (62%)

Query: 15  KKLANLIDLVNLPSTLRDFVGQSQISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDEKLKS 74
           K+      L +L   L++F+G  +++R     ++W+YI+  NLQDPNN+  + CDE+L+S
Sbjct: 140 KRGGGFCKLCSLSPQLQEFMGAPEMARTEVVKQLWAYIREKNLQDPNNRRNIICDERLRS 199

Query: 75  IL 76
           + 
Sbjct: 200 LF 201



 Score = 53.1 bits (126), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 5/54 (9%)

Query: 23  LVNLPSTLRDFVGQSQISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDEKLKSIL 76
           LVN   T     G+S+++R     R+W YIK NNLQDP++K  + CDEKLK + 
Sbjct: 275 LVNFLGT-----GESELARTDVIKRMWDYIKGNNLQDPSDKRKIICDEKLKELF 323


>Glyma01g39030.1 
          Length = 337

 Score = 53.1 bits (126), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 5/54 (9%)

Query: 23  LVNLPSTLRDFVGQSQISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDEKLKSIL 76
           LVN   T     G+S+++R     R+W YIK NNLQDP++K  + CDEKLK + 
Sbjct: 266 LVNFLGT-----GESELARTDVIKRMWDYIKGNNLQDPSDKRKIICDEKLKELF 314



 Score = 49.3 bits (116), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 37/62 (59%)

Query: 15  KKLANLIDLVNLPSTLRDFVGQSQISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDEKLKS 74
           K+      L +L   L++F+   +++R     ++W YI+  NLQDPNN+  + CDE+L+S
Sbjct: 131 KRGGGFCKLCSLSPQLQEFMEAPEMARTEVVKQLWVYIREKNLQDPNNRRNIICDERLRS 190

Query: 75  IL 76
           + 
Sbjct: 191 LF 192


>Glyma01g39030.2 
          Length = 243

 Score = 49.3 bits (116), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 37/62 (59%)

Query: 15  KKLANLIDLVNLPSTLRDFVGQSQISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDEKLKS 74
           K+      L +L   L++F+   +++R     ++W YI+  NLQDPNN+  + CDE+L+S
Sbjct: 131 KRGGGFCKLCSLSPQLQEFMEAPEMARTEVVKQLWVYIREKNLQDPNNRRNIICDERLRS 190

Query: 75  IL 76
           + 
Sbjct: 191 LF 192


>Glyma08g43590.2 
          Length = 330

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 35/59 (59%)

Query: 18  ANLIDLVNLPSTLRDFVGQSQISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDEKLKSIL 76
             L  +  +   L+  VGQ  +SR     ++W+YI+ NNLQDP+NK  + C+++L+ + 
Sbjct: 146 GGLTKICGVSPELQVIVGQPALSRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRVVF 204


>Glyma08g43590.1 
          Length = 330

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 35/59 (59%)

Query: 18  ANLIDLVNLPSTLRDFVGQSQISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDEKLKSIL 76
             L  +  +   L+  VGQ  +SR     ++W+YI+ NNLQDP+NK  + C+++L+ + 
Sbjct: 146 GGLTKICGVSPELQVIVGQPALSRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRVVF 204


>Glyma17g01230.1 
          Length = 329

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 3/77 (3%)

Query: 3   PQRMKKAITDNPKK---LANLIDLVNLPSTLRDFVGQSQISRLGCFMRVWSYIKTNNLQD 59
           PQ  K+++    K+      L  +  +   L+  VG+  + R     ++W+YIK NNLQD
Sbjct: 123 PQVPKESVQTGSKRRGGAGGLNKVCGVSPELQAVVGEPAMPRTEIVRQLWAYIKKNNLQD 182

Query: 60  PNNKNVVNCDEKLKSIL 76
           P NK  + CD+ L+ + 
Sbjct: 183 PGNKRKIICDDALRLVF 199


>Glyma07g39530.1 
          Length = 332

 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 29/47 (61%)

Query: 30  LRDFVGQSQISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDEKLKSIL 76
           L+  VG+  + R     ++W+YIK NNLQDP NK  + CD+ L+ + 
Sbjct: 156 LQAVVGEPAMPRTEIVRQLWAYIKKNNLQDPGNKRKIICDDALRLVF 202