Miyakogusa Predicted Gene

Lj6g3v0820190.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0820190.1 tr|I1N0J3|I1N0J3_SOYBN GrpE protein homolog
OS=Glycine max GN=Gma.3177 PE=3 SV=1,74.06,0,seg,NULL; no
description,GrpE nucleotide exchange factor, coiled-coil; no
description,GrpE nucleotid,CUFF.58367.1
         (284 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g43430.1                                                       382   e-106
Glyma18g10120.1                                                       378   e-105
Glyma02g46390.3                                                       334   8e-92
Glyma02g46390.2                                                       326   2e-89
Glyma02g46390.1                                                       325   3e-89
Glyma18g39460.1                                                       167   1e-41
Glyma03g00840.1                                                        62   5e-10
Glyma06g11310.1                                                        56   4e-08

>Glyma08g43430.1 
          Length = 289

 Score =  382 bits (981), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 209/291 (71%), Positives = 233/291 (80%), Gaps = 17/291 (5%)

Query: 3   RVLSRAS----RSFMLLSASHKXXXXXXXXXXXXXXXIVHQSPNKLIPLQVNLLNRSMNS 58
           RVLSR+S    RSF L S S +               ++H SPNKLIP+Q N LN SMN 
Sbjct: 5   RVLSRSSATLSRSFTLFSVS-RNSQPFSTNLSNNFNSLLHPSPNKLIPVQTNFLN-SMNP 62

Query: 59  SLTPIFGFSSSASPEPES-------QNEQDKAAADQTKEPDAEPESECDNLSRDDLIKLV 111
           SLT  FGFSS+AS E  S       Q+EQ +AA DQTKE D E E  CD LSRDDLIKLV
Sbjct: 63  SLTSRFGFSSTASHEHASEGAKVSDQSEQAEAA-DQTKESDVEIE--CD-LSRDDLIKLV 118

Query: 112 AEKEELLKSKQEDIVEMKDKVMRSYAEMENVLSRTRRDAENSKKFAIQNFAKGLLDVADN 171
           AEKE+LLK K ++I +M+DKV+R+YAEMENV+ RTRR+AENSKKFAIQNFAK LLDVADN
Sbjct: 119 AEKEQLLKLKHKEIEKMQDKVLRTYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADN 178

Query: 172 LGRASSVVKDSFSKIESPNDSVEAAKLLKTLLEGVEMTEKQLAEVLKKHGVEKYDPTNEP 231
           LGRASSVVK+SFSKIESP +S EAA+LLKTLL+GVEMTEKQLAEVLKK GV+K+DPTNEP
Sbjct: 179 LGRASSVVKESFSKIESPEESSEAAELLKTLLKGVEMTEKQLAEVLKKFGVKKFDPTNEP 238

Query: 232 FDPNRHNAIFQIPDASKPPGTVGVVLKAGYMLYDRVLRPAEVGVTQEVEDN 282
           FDP+ HNAIFQIPDASK PGTVGVVLKAGYMLYDRVLRPAEVGVTQEVEDN
Sbjct: 239 FDPHMHNAIFQIPDASKAPGTVGVVLKAGYMLYDRVLRPAEVGVTQEVEDN 289


>Glyma18g10120.1 
          Length = 290

 Score =  378 bits (970), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 207/293 (70%), Positives = 231/293 (78%), Gaps = 20/293 (6%)

Query: 3   RVLSRAS----RSFMLLSASHKXXXXXXXXXXXXXXXIVHQSPNKLIPLQVNLLNRSMNS 58
           RVLSR+S    RSF L S S +               ++H SPNK+IP+Q N LN    S
Sbjct: 5   RVLSRSSAILSRSFTLFSVS-RNSQPFSTTLSNNFHSLLHPSPNKVIPVQTNFLN----S 59

Query: 59  SLTPIFGFSSSASPEPES-------QNEQDKAAADQTKEPDAEPESECDNLSRDDLIKLV 111
           SLT  FGFSS+AS E  S       Q+EQ +AA DQTKE   E  SECD LSRDDLIKLV
Sbjct: 60  SLTSRFGFSSTASHEHASEEAKVSDQSEQAEAA-DQTKESGVE--SECD-LSRDDLIKLV 115

Query: 112 AEKEELLKSKQEDIVEMKDKVMRSYAEMENVLSRTRRDAENSKKFAIQNFAKGLLDVADN 171
           AEKE+LLK K ++I +M+DKV+R+YAEMENV+ RTRR+AENSKKFAIQNFAK LLDVADN
Sbjct: 116 AEKEQLLKLKHKEIEKMQDKVLRTYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADN 175

Query: 172 LGRASSVVKDSFSKIESPNDSVEAAKLLKTLLEGVEMTEKQLAEVLKKHGVEKYDPTNEP 231
           LGRASSVVKD+FSKIESP +S EAA+LLKTLLEGVEMTEKQLAEVLKK GVEK+DPTNEP
Sbjct: 176 LGRASSVVKDNFSKIESPEESSEAAQLLKTLLEGVEMTEKQLAEVLKKFGVEKFDPTNEP 235

Query: 232 FDPNRHNAIFQIPDASKPPGTVGVVLKAGYMLYDRVLRPAEVGVTQEVEDNNS 284
           FDP+ HNAIFQIPDASK PGTVGVVLKAGY LYDRVLRPAEVGVTQEVEDN +
Sbjct: 236 FDPHMHNAIFQIPDASKAPGTVGVVLKAGYKLYDRVLRPAEVGVTQEVEDNKA 288


>Glyma02g46390.3 
          Length = 309

 Score =  334 bits (856), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 188/306 (61%), Positives = 217/306 (70%), Gaps = 36/306 (11%)

Query: 3   RVLSRASRSFM---LLSASHKXXXXXXXXXXXXXXXIVHQSPNKLIPLQVNLLNRSMNSS 59
           RVLSR S +     LLSAS                 + H SPNK+IP+Q+NLL   +NS 
Sbjct: 5   RVLSRVSTNICRTSLLSASQTPQHLSSFANINLHSLLPH-SPNKVIPVQLNLLLPPINSL 63

Query: 60  LTPIFGFSSSASPE-------------------PESQNE---------QDKAAADQTKEP 91
             P FGFSSSAS E                   P   NE         QDK A D+T+E 
Sbjct: 64  SAPRFGFSSSASTENNDKKNRNNVHNGDSTNADPAKANEEAKNNDQARQDKPA-DKTEES 122

Query: 92  DAEPESECDNLSRDDLIKLVAEKEELLKSKQEDIVEMKDKVMRSYAEMENVLSRTRRDAE 151
           D+E  SECD LSRDDLIKLVAEKEEL+  K ++I +M+DKV+R+YAEMENV+ RTRR+A+
Sbjct: 123 DSE--SECD-LSRDDLIKLVAEKEELVMLKHKEIEKMQDKVLRTYAEMENVMERTRREAD 179

Query: 152 NSKKFAIQNFAKGLLDVADNLGRASSVVKDSFSKIESPNDSVEAAKLLKTLLEGVEMTEK 211
           NSKKFA+QNFAK LLDVADNLGRASSV  ++FSKI++ +DS E  KLLKTLL+GVEMTEK
Sbjct: 180 NSKKFALQNFAKSLLDVADNLGRASSVATENFSKIDTSSDSAEVVKLLKTLLQGVEMTEK 239

Query: 212 QLAEVLKKHGVEKYDPTNEPFDPNRHNAIFQIPDASKPPGTVGVVLKAGYMLYDRVLRPA 271
           QL EVLKK GVEK+DPTNEPFDP+RHNAIFQIPD SKPPGTV  VLKAGYMLYDRV+RPA
Sbjct: 240 QLVEVLKKFGVEKFDPTNEPFDPHRHNAIFQIPDGSKPPGTVAAVLKAGYMLYDRVIRPA 299

Query: 272 EVGVTQ 277
           EVGVT 
Sbjct: 300 EVGVTH 305


>Glyma02g46390.2 
          Length = 319

 Score =  326 bits (835), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 188/316 (59%), Positives = 217/316 (68%), Gaps = 46/316 (14%)

Query: 3   RVLSRASRSFM---LLSASHKXXXXXXXXXXXXXXXIVHQSPNKL----------IPLQV 49
           RVLSR S +     LLSAS                 + H SPNK+          IP+Q+
Sbjct: 5   RVLSRVSTNICRTSLLSASQTPQHLSSFANINLHSLLPH-SPNKVLGISILVNKVIPVQL 63

Query: 50  NLLNRSMNSSLTPIFGFSSSASPE-------------------PESQNE---------QD 81
           NLL   +NS   P FGFSSSAS E                   P   NE         QD
Sbjct: 64  NLLLPPINSLSAPRFGFSSSASTENNDKKNRNNVHNGDSTNADPAKANEEAKNNDQARQD 123

Query: 82  KAAADQTKEPDAEPESECDNLSRDDLIKLVAEKEELLKSKQEDIVEMKDKVMRSYAEMEN 141
           K A D+T+E D+E  SECD LSRDDLIKLVAEKEEL+  K ++I +M+DKV+R+YAEMEN
Sbjct: 124 KPA-DKTEESDSE--SECD-LSRDDLIKLVAEKEELVMLKHKEIEKMQDKVLRTYAEMEN 179

Query: 142 VLSRTRRDAENSKKFAIQNFAKGLLDVADNLGRASSVVKDSFSKIESPNDSVEAAKLLKT 201
           V+ RTRR+A+NSKKFA+QNFAK LLDVADNLGRASSV  ++FSKI++ +DS E  KLLKT
Sbjct: 180 VMERTRREADNSKKFALQNFAKSLLDVADNLGRASSVATENFSKIDTSSDSAEVVKLLKT 239

Query: 202 LLEGVEMTEKQLAEVLKKHGVEKYDPTNEPFDPNRHNAIFQIPDASKPPGTVGVVLKAGY 261
           LL+GVEMTEKQL EVLKK GVEK+DPTNEPFDP+RHNAIFQIPD SKPPGTV  VLKAGY
Sbjct: 240 LLQGVEMTEKQLVEVLKKFGVEKFDPTNEPFDPHRHNAIFQIPDGSKPPGTVAAVLKAGY 299

Query: 262 MLYDRVLRPAEVGVTQ 277
           MLYDRV+RPAEVGVT 
Sbjct: 300 MLYDRVIRPAEVGVTH 315


>Glyma02g46390.1 
          Length = 335

 Score =  325 bits (834), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 188/330 (56%), Positives = 218/330 (66%), Gaps = 58/330 (17%)

Query: 3   RVLSRASRSFM---LLSASHKXXXXXXXXXXXXXXXIVHQSPNKLIPLQVNLLNRSMNSS 59
           RVLSR S +     LLSAS                 + H SPNK+IP+Q+NLL   +NS 
Sbjct: 5   RVLSRVSTNICRTSLLSASQTPQHLSSFANINLHSLLPH-SPNKVIPVQLNLLLPPINSL 63

Query: 60  LTPIFGFSSSASPE-------------------PESQNE---------QDKAAADQTKEP 91
             P FGFSSSAS E                   P   NE         QDK A D+T+E 
Sbjct: 64  SAPRFGFSSSASTENNDKKNRNNVHNGDSTNADPAKANEEAKNNDQARQDKPA-DKTEES 122

Query: 92  ------------------------DAEPESECDNLSRDDLIKLVAEKEELLKSKQEDIVE 127
                                   D++ ESECD LSRDDLIKLVAEKEEL+  K ++I +
Sbjct: 123 GSISDSQSQTVKRRRRGFKRTAFSDSDSESECD-LSRDDLIKLVAEKEELVMLKHKEIEK 181

Query: 128 MKDKVMRSYAEMENVLSRTRRDAENSKKFAIQNFAKGLLDVADNLGRASSVVKDSFSKIE 187
           M+DKV+R+YAEMENV+ RTRR+A+NSKKFA+QNFAK LLDVADNLGRASSV  ++FSKI+
Sbjct: 182 MQDKVLRTYAEMENVMERTRREADNSKKFALQNFAKSLLDVADNLGRASSVATENFSKID 241

Query: 188 SPNDSVEAAKLLKTLLEGVEMTEKQLAEVLKKHGVEKYDPTNEPFDPNRHNAIFQIPDAS 247
           + +DS E  KLLKTLL+GVEMTEKQL EVLKK GVEK+DPTNEPFDP+RHNAIFQIPD S
Sbjct: 242 TSSDSAEVVKLLKTLLQGVEMTEKQLVEVLKKFGVEKFDPTNEPFDPHRHNAIFQIPDGS 301

Query: 248 KPPGTVGVVLKAGYMLYDRVLRPAEVGVTQ 277
           KPPGTV  VLKAGYMLYDRV+RPAEVGVT 
Sbjct: 302 KPPGTVAAVLKAGYMLYDRVIRPAEVGVTH 331


>Glyma18g39460.1 
          Length = 184

 Score =  167 bits (424), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/187 (58%), Positives = 122/187 (65%), Gaps = 35/187 (18%)

Query: 36  IVHQSPNKLIPLQVNLLNRSMNSSLTPIFGFSSSASPEPES-------QNEQDKAAADQT 88
           ++H SPNKLIPLQ N LN    SSLT  FGFSS AS E  S       Q+EQ +A  DQT
Sbjct: 26  LLHPSPNKLIPLQTNFLN----SSLTSRFGFSSIASHEHASEEAKVSDQSEQAEAV-DQT 80

Query: 89  KEPDAEPESECDNLSRDDLIKLVAEKEELLKSKQEDIVEMKDKVMRSYAEMENVLSRTRR 148
           KE D E  SECD LSRDDLIKLV EKE+LLK K ++I +M+   M    +          
Sbjct: 81  KESDVE--SECD-LSRDDLIKLVVEKEQLLKLKHKEIEKMQRWRMSWIGQ---------- 127

Query: 149 DAENSKKFAIQNFAKGLLDVADNLGRASSVVKDSFSKIESPNDSVEAAKLLKTLLEGVEM 208
                     +NFAK LLDV DNLGRASSVVKDSFSKIES  +S EAA+LLKTLLEGVEM
Sbjct: 128 ----------ENFAKSLLDVDDNLGRASSVVKDSFSKIESLEESSEAAQLLKTLLEGVEM 177

Query: 209 TEKQLAE 215
            EKQLAE
Sbjct: 178 IEKQLAE 184


>Glyma03g00840.1 
          Length = 335

 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 85/189 (44%), Gaps = 28/189 (14%)

Query: 102 LSRDDLIKLVAEKEELLKSKQEDIVEM--------------KDKVMRSYAEMENVLSRTR 147
           L+ +D +K +AE E  LKS +++ +E+              KD+++R  A+ +N   RT 
Sbjct: 124 LANNDEVK-IAELESSLKSVEDEKIELEVKIASLSEELSVEKDRILRISADFDNFRKRTE 182

Query: 148 RDAENSKKFAIQNFAKGLLDVADNLGRASSVVKDSFSKIESPNDSVEAAKLLKTLLEGVE 207
           RD  +    A     + LL V DN  RA + +K      E  N+S ++            
Sbjct: 183 RDRLSLVTNAQGEVVESLLPVLDNFDRAKTQIKVETEGEEKINNSYQSIY---------- 232

Query: 208 MTEKQLAEVLKKHGVEKYDPTNEPFDPNRHNAIFQIPDASKPPGTVGVVLKAGYMLYDRV 267
              KQ  E+L   GVE  +    PFDP  H AI +        G +    + G+ L +R+
Sbjct: 233 ---KQFIEILNSLGVEPVETVGTPFDPLLHEAIMREDSDEFEDGIIIQEFRKGFKLGERL 289

Query: 268 LRPAEVGVT 276
           LRP+ V V+
Sbjct: 290 LRPSMVKVS 298


>Glyma06g11310.1 
          Length = 335

 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 69/159 (43%), Gaps = 13/159 (8%)

Query: 118 LKSKQEDIVEMKDKVMRSYAEMENVLSRTRRDAENSKKFAIQNFAKGLLDVADNLGRASS 177
           L S   D    K   +R  A+ +N   RT ++  N +  A Q   + LL + DN  R   
Sbjct: 162 LSSLSADKAASKKSYLRLQADFDNFRKRTDKERLNIQSDAQQQVIEKLLLMVDNFERTQQ 221

Query: 178 VVKDSFSKIESPNDSVEAAKLLKTLLEGVEMTEKQLAEVLKKHGVEKYDPTNEPFDPNRH 237
            +K +           E  K +    +G+    KQ  EVL+ H V       +PF+P +H
Sbjct: 222 QIKAA----------TEKEKKIGVSYQGIY---KQFVEVLRNHNVSVVATVGKPFNPLQH 268

Query: 238 NAIFQIPDASKPPGTVGVVLKAGYMLYDRVLRPAEVGVT 276
            A+ +        G +    + G++L DRVLRPA V V+
Sbjct: 269 EAVAREESTEFKKGIIIKESRRGFLLRDRVLRPALVKVS 307