Miyakogusa Predicted Gene

Lj6g3v0820170.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0820170.1 tr|Q9FLP2|Q9FLP2_ARATH At5g55210 OS=Arabidopsis
thaliana GN=At5g55210 PE=2 SV=1,38.86,4e-19,seg,NULL,CUFF.58362.1
         (174 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g43440.1                                                       194   3e-50
Glyma18g10110.1                                                       189   2e-48
Glyma09g01220.1                                                        93   2e-19
Glyma15g12050.1                                                        82   2e-16

>Glyma08g43440.1 
          Length = 176

 Score =  194 bits (494), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 106/178 (59%), Positives = 118/178 (66%), Gaps = 14/178 (7%)

Query: 1   MEAVGSTRLGRATSRYGAPAVFSGPVRKWKKKWIHVTPXX----XXXXXXXXXXXXXXKP 56
           MEAVGS RL RATSRYGAP VFSGPVRKWKKKW+HVTP                      
Sbjct: 1   MEAVGS-RLSRATSRYGAPTVFSGPVRKWKKKWVHVTPSSLPNNNSHSHTNNFTTTTTND 59

Query: 57  SSRLLLRRWTPITXXXXXXXXXXXXXDNVSDEPPKRKFRYTPIAVLEEQKK-GVEKSEHE 115
           SSRLLLRRWTP T               VSD+PP+RKFRYTPIAVLEEQKK  V K+EHE
Sbjct: 60  SSRLLLRRWTPTTADDSAGA--------VSDDPPRRKFRYTPIAVLEEQKKMNVVKAEHE 111

Query: 116 PTSESDKLTAKQINATQEVHGKLNMNEISEESKDSNMSKLDLGFDLQGNNGENSPNYD 173
           PT E+D+L  +Q N T E+ GKLNMNE+ EE+KDSN+  LDLG D Q N GENS + D
Sbjct: 112 PTIEADQLAFRQTNVTHEMQGKLNMNEMLEETKDSNIGNLDLGSDFQSNTGENSHDSD 169


>Glyma18g10110.1 
          Length = 175

 Score =  189 bits (479), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 104/177 (58%), Positives = 117/177 (66%), Gaps = 13/177 (7%)

Query: 1   MEAVGSTRLGRATSRYGAPAVFSGPVRKWKKKWIHVTPXX---XXXXXXXXXXXXXXKPS 57
           MEAVGS RL RA+SRYGAP VFSGPVRKWKKKW+HVTP                     S
Sbjct: 1   MEAVGS-RLSRASSRYGAPTVFSGPVRKWKKKWVHVTPSSLPNNSSHSHTNNSTTTSSAS 59

Query: 58  SRLLLRRWTPITXXXXXXXXXXXXXDNVSDEPPKRKFRYTPIAVLEEQKK-GVEKSEHEP 116
           SRLLLRRWTP T               VSDEPP+RKFRYTP+ VLEEQKK  V K+EHEP
Sbjct: 60  SRLLLRRWTPATVDDAAGA--------VSDEPPRRKFRYTPVVVLEEQKKMNVVKAEHEP 111

Query: 117 TSESDKLTAKQINATQEVHGKLNMNEISEESKDSNMSKLDLGFDLQGNNGENSPNYD 173
           T E+D+L A++ N T E+ GKLNMNE+ EE+KDSN+  LDLG D Q N G NS N D
Sbjct: 112 TIETDQLAARKTNVTHEMQGKLNMNEMLEETKDSNIGNLDLGSDFQSNTGGNSQNSD 168


>Glyma09g01220.1 
          Length = 202

 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/190 (35%), Positives = 99/190 (52%), Gaps = 23/190 (12%)

Query: 1   MEAVGSTRLGRATSRYGAPAVFSGPVRKWKKKWIHVTPXXXXXXXXXXXXXXXXKPSSRL 60
           ME VG+ RLGR+++RYG   VF+GPVRKWKKKWIHV+P                  +S L
Sbjct: 1   MEGVGA-RLGRSSTRYGPATVFTGPVRKWKKKWIHVSPSSASSNSNANNHHNHASHASHL 59

Query: 61  LLRRWTPITXXXXXXXXXXXXXDN----VSDEPPKRKFRYTPIAVLEEQK------KGVE 110
           LL +WTP+T              +      +EPP+RKF+Y P+A+LEEQK      +G E
Sbjct: 60  LLYKWTPLTHSQNTATTNNANAKDSPPEPPEEPPRRKFKYVPVALLEEQKNEGAESEGTE 119

Query: 111 KSEHEPTS-ESDKLTAKQINATQEVHGKLNMNEI-SEES----------KDSNMSKLDLG 158
           K + E    ++D   A+  +  + +  K ++N++  EES          +D N S LDL 
Sbjct: 120 KVDEESKPIDADSGAAEATHKNETLDEKPDINDVPMEESQSQYKNQVVRQDLNESTLDLS 179

Query: 159 FDLQGNNGEN 168
             L  ++ E+
Sbjct: 180 LGLTSHDDEH 189


>Glyma15g12050.1 
          Length = 201

 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/192 (35%), Positives = 95/192 (49%), Gaps = 28/192 (14%)

Query: 1   MEAVGSTRLGRATSRYGAPAVFSGPVRKWKKKWIHVTPXXXXXXXXXXXXXXXXKPSSRL 60
           ME VG+ RLGR+++RYG   VF+GPVRKWKKKWIHV+P                  +S L
Sbjct: 1   MEGVGA-RLGRSSTRYGPATVFTGPVRKWKKKWIHVSPSSASSNSNANNHASN---ASHL 56

Query: 61  LLRRWTPITXXX------XXXXXXXXXXDNVSDEPPKRKFRYTPIAVLEEQK------KG 108
           LL +WTP+T                        EPP+RKF+Y P+A+LEEQK      +G
Sbjct: 57  LLYKWTPLTQSQNTTNNANANGNAKDAPPEPPAEPPRRKFKYVPVALLEEQKNEAAENEG 116

Query: 109 VEKSEHEPTS-ESDKLTAKQINATQEVHGKLNMNEI-SEES----------KDSNMSKLD 156
            EK + E    + D   A+     + +  K ++N++  EES          +D N S LD
Sbjct: 117 TEKVDEESKPIDVDSGAAEATRKNETLDEKPDINDVPMEESQSQYKNQVVRQDLNESTLD 176

Query: 157 LGFDLQGNNGEN 168
           L   L  ++ E+
Sbjct: 177 LSLGLTSHDDEH 188