Miyakogusa Predicted Gene
- Lj6g3v0754260.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0754260.1 tr|Q00Y64|Q00Y64_OSTTA Hydroxymethylpyrimidine
kinase (ISS) OS=Ostreococcus tauri GN=Ot12g00960 PE=3,53.75,8e-18,no
description,Nucleotide-binding, alpha-beta plait; RNA recognition
motif,RNA recognition motif
dom,NODE_19222_length_1476_cov_73.412605.path2.1
(477 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma18g08610.1 249 4e-66
Glyma18g08590.1 176 4e-44
Glyma08g44170.1 175 9e-44
Glyma08g44150.1 174 1e-43
Glyma02g35000.1 88 2e-17
Glyma11g11360.1 76 1e-13
Glyma17g36180.1 66 7e-11
Glyma03g08300.1 60 4e-09
Glyma16g23330.1 59 1e-08
>Glyma18g08610.1
Length = 696
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 137/257 (53%), Positives = 150/257 (58%), Gaps = 8/257 (3%)
Query: 227 DLHWWTTDAELEAELCKYGQVKEVKFFDEKASGKSKGYCQVEFYEPSAAAACKDGMNEHE 286
DLHWWTTDAELE EL +YG VKEVKFFDEKASGKSKGYCQVEF++PSAA ACK+GMN H
Sbjct: 235 DLHWWTTDAELETELSRYGPVKEVKFFDEKASGKSKGYCQVEFFDPSAATACKEGMNGHV 294
Query: 287 FNGRACVVAYASPFTVKKMGEAQIARNQQGNVNQSAVPQXXXXXXXXXXXXXXSNV--GT 344
FNGR CVVA+ASPFTVKKMGEAQI RNQQ +NQSAVPQ SN+ G
Sbjct: 295 FNGRPCVVAFASPFTVKKMGEAQINRNQQ--MNQSAVPQGRRGPADAGAKPGGSNISTGG 352
Query: 345 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVN----QXXXXXXXXXXXXXXXXXXXXXX 400
PVN +
Sbjct: 353 NYQGGEGNRGYGRGGGNWGRGNNPGMGNRGPVNPMRNRGGGMGGRGIMGHGGNGFGQGMG 412
Query: 401 ANPPLMHHQSMMNQGFDPAFGGPIGRMGNYGGFPGAPTPPFSGIMXXXXXXXXXXXXXXX 460
PP++H QSMMNQGFDPAFGGP+GRMG YGGFPGAP PPFSGI+
Sbjct: 413 GTPPMLHPQSMMNQGFDPAFGGPMGRMGGYGGFPGAPAPPFSGILPSFPGVGGVGLPGVA 472
Query: 461 XXXNPAFFGRGMHMNGM 477
NPAFFGRGM +NGM
Sbjct: 473 PHVNPAFFGRGMPVNGM 489
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 61/138 (44%), Gaps = 2/138 (1%)
Query: 8 DPMDHFHRNEAISAVADDGFLAEXXXXXXXX-XXXXXXGEGFLQSLRKNDDSAFRNXXXX 66
DPMD FHRNEAISAVAD+GFL E GEGFLQSLRKNDDS FRN
Sbjct: 13 DPMDQFHRNEAISAVADEGFLGEEEDDDYEDLYNDVNVGEGFLQSLRKNDDSGFRNDEVE 72
Query: 67 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXDGFRGNEXXXXXXXXXXXIRVE 125
DGF+ IR+E
Sbjct: 73 EKKPPPPPPVPDAAGVSIPGVGGGGGSGVVESRVSGRVDGFQNQGYRGNEVGAKGGIRIE 132
Query: 126 LGQKSGKLSEIEEQSGND 143
LG +SG LSEIE+Q GND
Sbjct: 133 LGNQSGNLSEIEDQGGND 150
>Glyma18g08590.1
Length = 664
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 86/118 (72%), Positives = 93/118 (78%), Gaps = 2/118 (1%)
Query: 227 DLHWWTTDAELEAELCKYGQVKEVKFFDEKASGKSKGYCQVEFYEPSAAAACKDGMNEHE 286
DLHWWTTDAELE EL +YG VKEVKFFDEKASGKSKGYCQVEF++PSAA ACK+GMN H
Sbjct: 201 DLHWWTTDAELETELSRYGPVKEVKFFDEKASGKSKGYCQVEFFDPSAATACKEGMNGHV 260
Query: 287 FNGRACVVAYASPFTVKKMGEAQIARNQQGNVNQSAVPQXXXXXXXXXXXXXXSNVGT 344
FNGR CVVA+ASPFTVKKMGEAQI RNQQ +NQSAVPQ SN+ T
Sbjct: 261 FNGRPCVVAFASPFTVKKMGEAQINRNQQ--MNQSAVPQGRRGPADAGAKPGGSNIST 316
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 48/76 (63%), Positives = 53/76 (69%)
Query: 402 NPPLMHHQSMMNQGFDPAFGGPIGRMGNYGGFPGAPTPPFSGIMXXXXXXXXXXXXXXXX 461
PP++H QSMMNQGFDPAFGGP+GRMG YGGFPGAP PPFSGI+
Sbjct: 380 TPPMLHPQSMMNQGFDPAFGGPMGRMGGYGGFPGAPAPPFSGILPSFPGVGGVGLPGVAP 439
Query: 462 XXNPAFFGRGMHMNGM 477
NPAFFGRGM +NGM
Sbjct: 440 HVNPAFFGRGMPVNGM 455
>Glyma08g44170.1
Length = 664
Score = 175 bits (444), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 87/118 (73%), Positives = 92/118 (77%), Gaps = 2/118 (1%)
Query: 227 DLHWWTTDAELEAELCKYGQVKEVKFFDEKASGKSKGYCQVEFYEPSAAAACKDGMNEHE 286
DLHWWTTDAELEAEL KYG VKEVKFFDEKASGKSKGYCQVEFYE AA ACK+GMN H
Sbjct: 203 DLHWWTTDAELEAELSKYGSVKEVKFFDEKASGKSKGYCQVEFYEAFAATACKEGMNGHV 262
Query: 287 FNGRACVVAYASPFTVKKMGEAQIARNQQGNVNQSAVPQXXXXXXXXXXXXXXSNVGT 344
FNGR CVVA+ASPFTVKKMGEAQI RNQQ +NQ+AVPQ SN+ T
Sbjct: 263 FNGRPCVVAFASPFTVKKMGEAQINRNQQ--MNQTAVPQGRRGPADAGAKPGGSNIST 318
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/75 (64%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 401 ANPPLMHHQSMMNQGFDPAFGGPIGRMGNYGGFPGAPTPPFSGIMXXXXXXXXXXXXXXX 460
A PPL+H QSMMNQGFDPAFG P+GRMG+YGGFPGAPTPPFSGI+
Sbjct: 382 ATPPLLHPQSMMNQGFDPAFG-PMGRMGSYGGFPGAPTPPFSGILPSFPGVGGVGLPGVA 440
Query: 461 XXXNPAFFGRGMHMN 475
NPAFFGRGM +N
Sbjct: 441 PHVNPAFFGRGMPVN 455
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 45/62 (72%)
Query: 1 MEEGEGGDPMDHFHRNEAISAVADDGFLAEXXXXXXXXXXXXXXGEGFLQSLRKNDDSAF 60
M+EGEGGDPMD FHRNEAISAVADDGFL E GEGFLQSLRKN+DS F
Sbjct: 1 MDEGEGGDPMDQFHRNEAISAVADDGFLGEEDDDYEDLYNDVNVGEGFLQSLRKNEDSGF 60
Query: 61 RN 62
RN
Sbjct: 61 RN 62
>Glyma08g44150.1
Length = 648
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/118 (72%), Positives = 92/118 (77%), Gaps = 2/118 (1%)
Query: 227 DLHWWTTDAELEAELCKYGQVKEVKFFDEKASGKSKGYCQVEFYEPSAAAACKDGMNEHE 286
DLHWWTTDAELE EL KYG VKEVKFFDEKASGKSKGYCQVEF++PSAA ACK+GMN H
Sbjct: 187 DLHWWTTDAELETELSKYGPVKEVKFFDEKASGKSKGYCQVEFFDPSAATACKEGMNGHV 246
Query: 287 FNGRACVVAYASPFTVKKMGEAQIARNQQGNVNQSAVPQXXXXXXXXXXXXXXSNVGT 344
FNGR CVVA+ASPFTVKKMGEAQI RNQQ +N SAVPQ SN+ T
Sbjct: 247 FNGRPCVVAFASPFTVKKMGEAQINRNQQ--MNPSAVPQGRRGPADAGAKPGGSNIST 302
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 52/74 (70%)
Query: 402 NPPLMHHQSMMNQGFDPAFGGPIGRMGNYGGFPGAPTPPFSGIMXXXXXXXXXXXXXXXX 461
PP++H QSMMNQGFDPAFGGP+GRMG YGGFPGAPTPPFSGI+
Sbjct: 366 TPPMLHPQSMMNQGFDPAFGGPMGRMGGYGGFPGAPTPPFSGILPSFPGVGGVGLPGVAP 425
Query: 462 XXNPAFFGRGMHMN 475
NPAFFGRGM +N
Sbjct: 426 HVNPAFFGRGMPVN 439
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 62/145 (42%), Gaps = 9/145 (6%)
Query: 4 GEGGDPMDHFHRNEAISAVADDGFLAEXXXXXXXX-XXXXXXGEGFLQSLRKNDDSAFRN 62
GE GDPMD FHRNEAISAVADDGFL E GEGFLQSLRKNDDS FRN
Sbjct: 9 GESGDPMDQFHRNEAISAVADDGFLGEEEDDDYEDLYNDVNVGEGFLQSLRKNDDSGFRN 68
Query: 63 XXXXXXXXXXXXXXXXXXXXXX--------XXXXXXXXXXXXXXXXXXXDGFRGNEXXXX 114
DGF+
Sbjct: 69 DDVEEKKPPPPPPAVPDATGVSIPGDGGGGEGVGGGGSGVVESRVSGSVDGFQNQGFRGN 128
Query: 115 XXXXXXXIRVELGQKSGKLSEIEEQ 139
IRVELG +SGKL+EIE+Q
Sbjct: 129 DVGSKGGIRVELGNQSGKLTEIEDQ 153
>Glyma02g35000.1
Length = 265
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 45/59 (76%)
Query: 227 DLHWWTTDAELEAELCKYGQVKEVKFFDEKASGKSKGYCQVEFYEPSAAAACKDGMNEH 285
DLHW TT ELE EL Y +K++KFF+EK KSKGYCQVEF+ PS A ACK+GMNEH
Sbjct: 207 DLHWRTTYVELETELSMYEPMKKMKFFNEKLRRKSKGYCQVEFFYPSVATACKEGMNEH 265
>Glyma11g11360.1
Length = 116
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/44 (72%), Positives = 37/44 (84%)
Query: 227 DLHWWTTDAELEAELCKYGQVKEVKFFDEKASGKSKGYCQVEFY 270
DLHWWTTDA+LE +L KYG VKEV FF+EK SGKS GYC V+F+
Sbjct: 73 DLHWWTTDAKLETKLNKYGSVKEVNFFNEKVSGKSMGYCHVKFF 116
>Glyma17g36180.1
Length = 185
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 37/59 (62%), Gaps = 15/59 (25%)
Query: 227 DLHWWTTDAELEAELCKYGQVKEVKFFDEKASGKSKGYCQVEFYEPSAAAACKDGMNEH 285
D HWWTTD EL KYG VK VKFF+EK SGKSKG A ACK+GMNEH
Sbjct: 142 DSHWWTTDVELS----KYGPVKVVKFFNEKTSGKSKG-----------AIACKEGMNEH 185
>Glyma03g08300.1
Length = 117
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/42 (66%), Positives = 34/42 (80%), Gaps = 4/42 (9%)
Query: 227 DLHWWTTDAELEAELCKYGQVKEVKFFDEKASGKSKGYCQVE 268
DLHW T+DA+L KYG +KEVKFF+EKA+GKS GYCQV+
Sbjct: 8 DLHWRTSDAKLS----KYGPMKEVKFFNEKANGKSNGYCQVD 45
>Glyma16g23330.1
Length = 217
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 29/36 (80%)
Query: 227 DLHWWTTDAELEAELCKYGQVKEVKFFDEKASGKSK 262
D HWWT DAELE EL KY +KEV+FF EKASGKSK
Sbjct: 181 DSHWWTIDAELEIELSKYKPMKEVQFFYEKASGKSK 216