Miyakogusa Predicted Gene

Lj6g3v0753110.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0753110.3 Non Chatacterized Hit- tr|G7JY02|G7JY02_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,73.24,1e-18,DUF647,Protein of unknown function DUF647;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,Protein of unk,CUFF.58219.3
         (78 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g07190.1                                                        96   7e-21
Glyma01g07190.2                                                        96   8e-21
Glyma01g07190.3                                                        96   8e-21
Glyma02g13010.1                                                        72   2e-13

>Glyma01g07190.1 
          Length = 436

 Score = 96.3 bits (238), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 52/71 (73%), Positives = 52/71 (73%), Gaps = 19/71 (26%)

Query: 2   YIRTMLSTQALLSAIGVGEKSATVIGATF-------------------QGSNLDSNAKMW 42
           YIRTMLSTQALLSAIGVGEKSATVIGATF                   QGSNLDSNAKMW
Sbjct: 83  YIRTMLSTQALLSAIGVGEKSATVIGATFQWFLRDLTGMLGGILFTFYQGSNLDSNAKMW 142

Query: 43  RLVADLMNDLG 53
           RLVADLMNDLG
Sbjct: 143 RLVADLMNDLG 153


>Glyma01g07190.2 
          Length = 329

 Score = 95.9 bits (237), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 52/71 (73%), Positives = 52/71 (73%), Gaps = 19/71 (26%)

Query: 2   YIRTMLSTQALLSAIGVGEKSATVIGATF-------------------QGSNLDSNAKMW 42
           YIRTMLSTQALLSAIGVGEKSATVIGATF                   QGSNLDSNAKMW
Sbjct: 83  YIRTMLSTQALLSAIGVGEKSATVIGATFQWFLRDLTGMLGGILFTFYQGSNLDSNAKMW 142

Query: 43  RLVADLMNDLG 53
           RLVADLMNDLG
Sbjct: 143 RLVADLMNDLG 153


>Glyma01g07190.3 
          Length = 302

 Score = 95.9 bits (237), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 52/71 (73%), Positives = 52/71 (73%), Gaps = 19/71 (26%)

Query: 2   YIRTMLSTQALLSAIGVGEKSATVIGATF-------------------QGSNLDSNAKMW 42
           YIRTMLSTQALLSAIGVGEKSATVIGATF                   QGSNLDSNAKMW
Sbjct: 83  YIRTMLSTQALLSAIGVGEKSATVIGATFQWFLRDLTGMLGGILFTFYQGSNLDSNAKMW 142

Query: 43  RLVADLMNDLG 53
           RLVADLMNDLG
Sbjct: 143 RLVADLMNDLG 153


>Glyma02g13010.1 
          Length = 314

 Score = 71.6 bits (174), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/63 (65%), Positives = 41/63 (65%), Gaps = 19/63 (30%)

Query: 10 QALLSAIGVGEKSATVIGATFQ-------------------GSNLDSNAKMWRLVADLMN 50
          QALL AIGV EKSATVIGATFQ                   GSNLDS AKMWRLVADLMN
Sbjct: 9  QALLIAIGVEEKSATVIGATFQWFLRDLTGMLGGILFTFYQGSNLDSYAKMWRLVADLMN 68

Query: 51 DLG 53
          DLG
Sbjct: 69 DLG 71