Miyakogusa Predicted Gene

Lj6g3v0753090.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0753090.2 Non Chatacterized Hit- tr|K4CXD0|K4CXD0_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,31.97,1e-18,RNA
RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN,NULL; FAMILY NOT
NAMED,NULL; seg,NULL,CUFF.58330.2
         (406 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g08610.1                                                       353   2e-97
Glyma18g08590.1                                                       351   1e-96
Glyma08g44150.1                                                       303   2e-82
Glyma08g44170.1                                                       297   2e-80

>Glyma18g08610.1 
          Length = 696

 Score =  353 bits (906), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 212/412 (51%), Positives = 225/412 (54%), Gaps = 11/412 (2%)

Query: 1   MNEHEFNGRACVVAYASPFTVKKMGEAQIARNQQGNVNQSAVPQXXXXXXXXXXXXXXSN 60
           MN H FNGR CVVA+ASPFTVKKMGEAQI RNQQ  +NQSAVPQ              SN
Sbjct: 290 MNGHVFNGRPCVVAFASPFTVKKMGEAQINRNQQ--MNQSAVPQGRRGPADAGAKPGGSN 347

Query: 61  V--GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVN----QXXXXXXXXXXXXXXXXX 114
           +  G                               PVN    +                 
Sbjct: 348 ISTGGNYQGGEGNRGYGRGGGNWGRGNNPGMGNRGPVNPMRNRGGGMGGRGIMGHGGNGF 407

Query: 115 XXXXXANPPLMHHQSMMNQGFDPAFGGPIGRMGNYGGFPGAPTPPFSGIMXXXXXXXXXX 174
                  PP++H QSMMNQGFDPAFGGP+GRMG YGGFPGAP PPFSGI+          
Sbjct: 408 GQGMGGTPPMLHPQSMMNQGFDPAFGGPMGRMGGYGGFPGAPAPPFSGILPSFPGVGGVG 467

Query: 175 XXXXXXXXNPAFFXXXXXXXXXXXXPTSGMDGPNMGMWSDPNMXXXXXXXXXXXXXXXSS 234
                   NPAFF            P S MDGPNMGMWSDPNM               SS
Sbjct: 468 LPGVAPHVNPAFFGRGMPVNGMGMMPGSVMDGPNMGMWSDPNMGGWGGEEPGGGKAGESS 527

Query: 235 YGEEAASDHQYGEVNHDRAGWTNTTRDKDRGSERDWSGTSERRYRDDRDQGYERDAPSEK 294
           YGEEAASD QYGEV+HDRAGW    R+KDRGSERDWSG+SERRYRDDRDQGYERDA  EK
Sbjct: 528 YGEEAASDQQYGEVSHDRAGWP--MREKDRGSERDWSGSSERRYRDDRDQGYERDASREK 585

Query: 295 DMGHDHEWSGRRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADH 354
           DMGHDHEWS RR                                             ADH
Sbjct: 586 DMGHDHEWSERRH-RDDRETGRERSRDRERSRDRDRDRDREKDLRERDRHREDRDGYADH 644

Query: 355 HRYRDREAEPDDELERGRSSRTHSKSRLSHDEEHHSRPRDADYGKRRRLTSE 406
           HR+RDREAE DDE ERGRSSRTHSKSRLS +EEHHSRPRDADYGKRRRLTSE
Sbjct: 645 HRFRDREAEHDDEWERGRSSRTHSKSRLSQEEEHHSRPRDADYGKRRRLTSE 696


>Glyma18g08590.1 
          Length = 664

 Score =  351 bits (900), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 212/413 (51%), Positives = 225/413 (54%), Gaps = 11/413 (2%)

Query: 1   MNEHEFNGRACVVAYASPFTVKKMGEAQIARNQQGNVNQSAVPQXXXXXXXXXXXXXXSN 60
           MN H FNGR CVVA+ASPFTVKKMGEAQI RNQQ  +NQSAVPQ              SN
Sbjct: 256 MNGHVFNGRPCVVAFASPFTVKKMGEAQINRNQQ--MNQSAVPQGRRGPADAGAKPGGSN 313

Query: 61  V--GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVN----QXXXXXXXXXXXXXXXXX 114
           +  G                               PVN    +                 
Sbjct: 314 ISTGGNYQGGEGNRGYGRGGGNWGRGNNPGMGNRGPVNPMRNRGGGMGGRGIMGHGGNGF 373

Query: 115 XXXXXANPPLMHHQSMMNQGFDPAFGGPIGRMGNYGGFPGAPTPPFSGIMXXXXXXXXXX 174
                  PP++H QSMMNQGFDPAFGGP+GRMG YGGFPGAP PPFSGI+          
Sbjct: 374 GQGMGGTPPMLHPQSMMNQGFDPAFGGPMGRMGGYGGFPGAPAPPFSGILPSFPGVGGVG 433

Query: 175 XXXXXXXXNPAFFXXXXXXXXXXXXPTSGMDGPNMGMWSDPNMXXXXXXXXXXXXXXXSS 234
                   NPAFF            P S MDGPNMGMWSDPNM               SS
Sbjct: 434 LPGVAPHVNPAFFGRGMPVNGMGMMPGSVMDGPNMGMWSDPNMGGWGGEEPGGGKAGESS 493

Query: 235 YGEEAASDHQYGEVNHDRAGWTNTTRDKDRGSERDWSGTSERRYRDDRDQGYERDAPSEK 294
           YGEEAASD QYGEV+HDRAGW    R+KDRGSERDWSG+SERRYRDDRDQGYERDA  EK
Sbjct: 494 YGEEAASDQQYGEVSHDRAGWP--MREKDRGSERDWSGSSERRYRDDRDQGYERDASREK 551

Query: 295 DMGHDHEWSGRR-QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAD 353
           DMGHDHEWS RR +                                            AD
Sbjct: 552 DMGHDHEWSERRHRDDRETGRERSRDRDRDRERSRDRDRDREKDHRERDRHREDRERYAD 611

Query: 354 HHRYRDREAEPDDELERGRSSRTHSKSRLSHDEEHHSRPRDADYGKRRRLTSE 406
           HHRYRDREAE DDE ERGRSSRTHSKSRLS +EEHHSRPRDADY KRRRLTSE
Sbjct: 612 HHRYRDREAEHDDEWERGRSSRTHSKSRLSQEEEHHSRPRDADYVKRRRLTSE 664


>Glyma08g44150.1 
          Length = 648

 Score =  303 bits (777), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 174/286 (60%), Positives = 182/286 (63%), Gaps = 3/286 (1%)

Query: 121 NPPLMHHQSMMNQGFDPAFGGPIGRMGNYGGFPGAPTPPFSGIMXXXXXXXXXXXXXXXX 180
            PP++H QSMMNQGFDPAFGGP+GRMG YGGFPGAPTPPFSGI+                
Sbjct: 366 TPPMLHPQSMMNQGFDPAFGGPMGRMGGYGGFPGAPTPPFSGILPSFPGVGGVGLPGVAP 425

Query: 181 XXNPAFFXXXXXXXXXXXXPTSGMDGPNMGMWSDPNMXXXXXXXXXXXXXXXSSYGEEAA 240
             NPAFF            P SGMDGPNMGMWSDPNM               SSYGEEAA
Sbjct: 426 HVNPAFFGRGMPVNGMGMMPGSGMDGPNMGMWSDPNMGGWGGEEPGGGKAGESSYGEEAA 485

Query: 241 SDHQYGEVNHDRAGWTNTTRDKDRGSERDWSGTSERRYRDDRDQGYERDAPSEKDMGHDH 300
           SDHQYGEV+HDRAGW    R+KDRGSERDWSGTSERRYRDDRDQGYERDAP E+DMGHDH
Sbjct: 486 SDHQYGEVSHDRAGWP--MREKDRGSERDWSGTSERRYRDDRDQGYERDAPKEEDMGHDH 543

Query: 301 EWSGRRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADHHRYRDR 360
           EWS RR                                             ADHHRYRDR
Sbjct: 544 EWSERRH-RDDRETGRERSRDRDRERSRDRDRDRERDHRERDRHREDRDKYADHHRYRDR 602

Query: 361 EAEPDDELERGRSSRTHSKSRLSHDEEHHSRPRDADYGKRRRLTSE 406
           EAE DDE ERGRSSR HSKSRLS +EEHHSRPRDADYGKRRRLTSE
Sbjct: 603 EAEHDDEWERGRSSRMHSKSRLSQEEEHHSRPRDADYGKRRRLTSE 648



 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 38/63 (60%), Positives = 41/63 (65%), Gaps = 2/63 (3%)

Query: 1   MNEHEFNGRACVVAYASPFTVKKMGEAQIARNQQGNVNQSAVPQXXXXXXXXXXXXXXSN 60
           MN H FNGR CVVA+ASPFTVKKMGEAQI RNQQ  +N SAVPQ              SN
Sbjct: 242 MNGHVFNGRPCVVAFASPFTVKKMGEAQINRNQQ--MNPSAVPQGRRGPADAGAKPGGSN 299

Query: 61  VGT 63
           + T
Sbjct: 300 IST 302


>Glyma08g44170.1 
          Length = 664

 Score =  297 bits (760), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 173/287 (60%), Positives = 183/287 (63%), Gaps = 4/287 (1%)

Query: 120 ANPPLMHHQSMMNQGFDPAFGGPIGRMGNYGGFPGAPTPPFSGIMXXXXXXXXXXXXXXX 179
           A PPL+H QSMMNQGFDPAFG P+GRMG+YGGFPGAPTPPFSGI+               
Sbjct: 382 ATPPLLHPQSMMNQGFDPAFG-PMGRMGSYGGFPGAPTPPFSGILPSFPGVGGVGLPGVA 440

Query: 180 XXXNPAFFXXXXXXXXXXXXPTSGMDGPNMGMWSDPNMXXXXXXXXXXXXXXXSSYGEEA 239
              NPAFF            P SGMDGPNMGMWSDPNM               SSYGEEA
Sbjct: 441 PHVNPAFFGRGMPVNGMGMMPGSGMDGPNMGMWSDPNMGGWGGEEPGGGKAGESSYGEEA 500

Query: 240 ASDHQYGEVNHDRAGWTNTTRDKDRGSERDWSGTSERRYRDDRDQGYERDAPSEKDMGHD 299
           ASDHQYGEV+HDRAGW    R+KDRGSERDWSGTSERRYRDDRDQGY+RDAP EKDMGHD
Sbjct: 501 ASDHQYGEVSHDRAGWP--MREKDRGSERDWSGTSERRYRDDRDQGYDRDAPKEKDMGHD 558

Query: 300 HEWSGRRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADHHRYRD 359
           HEWS RR                                             ADHHRYRD
Sbjct: 559 HEWSERRH-RDDRETGRERSRDRDRERSRDRDRDRERDYRERDRHKEDRDRYADHHRYRD 617

Query: 360 REAEPDDELERGRSSRTHSKSRLSHDEEHHSRPRDADYGKRRRLTSE 406
           REAE DDE ERGRSS+ HSKS+LS +EEHHSRPRDADYGKRRRLTSE
Sbjct: 618 REAEHDDEWERGRSSKPHSKSQLSQEEEHHSRPRDADYGKRRRLTSE 664



 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 38/63 (60%), Positives = 42/63 (66%), Gaps = 2/63 (3%)

Query: 1   MNEHEFNGRACVVAYASPFTVKKMGEAQIARNQQGNVNQSAVPQXXXXXXXXXXXXXXSN 60
           MN H FNGR CVVA+ASPFTVKKMGEAQI RNQQ  +NQ+AVPQ              SN
Sbjct: 258 MNGHVFNGRPCVVAFASPFTVKKMGEAQINRNQQ--MNQTAVPQGRRGPADAGAKPGGSN 315

Query: 61  VGT 63
           + T
Sbjct: 316 IST 318