Miyakogusa Predicted Gene

Lj6g3v0727760.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0727760.1 Non Chatacterized Hit- tr|F7HLY0|F7HLY0_CALJA
Uncharacterized protein OS=Callithrix jacchus
GN=CCDC2,32.14,9e-19,DUF812,Protein of unknown function DUF812; JM1
PROTEIN,Protein of unknown function DUF812; coiled-co,CUFF.58187.1
         (340 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g08300.1                                                       489   e-138

>Glyma18g08300.1 
          Length = 337

 Score =  489 bits (1258), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 252/337 (74%), Positives = 273/337 (81%)

Query: 1   METQTPETEGTKGDASINQSVKDESNSKMEGFSRDELNCVLVEKELTEGQVGAGRGSFGN 60
           ME QT E E TK D SIN++ KDES+S+MEGF +DE +CVL EKE  EGQV AG GSFGN
Sbjct: 1   MEPQTLEIEVTKDDVSINRANKDESSSRMEGFIKDEFDCVLNEKEPPEGQVDAGGGSFGN 60

Query: 61  EEKSAPVGDGHLTVLKQKEKELIDEVTVRTSEVEHXXXXXXXXXXXXXXXFNNQHSVDFY 120
           EE    +GDG LTVLKQKEK+L+DEV+VRTSE+ H               FNNQHS+DFY
Sbjct: 61  EENPFHIGDGPLTVLKQKEKKLVDEVSVRTSELAHLEQELELMNETAEMAFNNQHSIDFY 120

Query: 121 IEQLNEQVQAKTNYLSTLESEWDTVRKPLEERKRNLEESLYSNSPDAQAMLQKLRXXXXX 180
           I+QLNEQVQAK NYL TLESEWDTVRKPLEERKR+LEESLYSN+PDA  MLQKLR     
Sbjct: 121 IDQLNEQVQAKRNYLLTLESEWDTVRKPLEERKRSLEESLYSNNPDALEMLQKLREAQQE 180

Query: 181 XXXXXXXXXNREEEHTKLLADLEKQQKVASRKSYTHRIKEITKNSRKQDADIERILKETR 240
                     REEEH KL AD+EK+QKVASRKSYT RIKEITKNSRKQDADIERILK+TR
Sbjct: 181 EQFILSEIMKREEEHLKLSADIEKKQKVASRKSYTDRIKEITKNSRKQDADIERILKDTR 240

Query: 241 EVQLESNSIQERLHRTYAVADEIVFREAKKDPTGLQVYRLLVSIHKGFEQISEKILATDR 300
            VQLESNSIQE LHRTYAVADEIVFREAKKDPTGL VYRLLVSIHKGFEQISEKILATDR
Sbjct: 241 VVQLESNSIQESLHRTYAVADEIVFREAKKDPTGLHVYRLLVSIHKGFEQISEKILATDR 300

Query: 301 IRREVAEYEMKLAATASTSLDVSKLQADLDVIIRENE 337
           IRREVAEYE KLAATAS SLDVS+L+A+LD IIRE E
Sbjct: 301 IRREVAEYETKLAATASRSLDVSELKANLDAIIREKE 337