Miyakogusa Predicted Gene

Lj6g3v0670130.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0670130.1 Non Chatacterized Hit- tr|I3SQ56|I3SQ56_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.55,0,seg,NULL;
K homology RNA-binding domain,K Homology domain; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAME,CUFF.58147.1
         (220 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g08100.1                                                       387   e-108
Glyma18g08080.1                                                       384   e-107
Glyma08g44800.1                                                       367   e-102
Glyma08g44870.1                                                       202   3e-52

>Glyma18g08100.1 
          Length = 233

 Score =  387 bits (993), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 189/220 (85%), Positives = 198/220 (90%)

Query: 1   MQSNEAPSTMEVEASPSXXXXXXXXXXXXXXXXXXMSDGQVQFRKVSVPPHRYTPLKKAW 60
           M+SN+A S+MEVE  PS                  MSDGQVQFRKV+VPPHRYTPLKKAW
Sbjct: 14  MESNQAASSMEVETVPSEAKLLPPKPKFEPLKPHEMSDGQVQFRKVNVPPHRYTPLKKAW 73

Query: 61  MDLYTPIYEQMKIDVRMNLKARKVELKTRRDTPDISNLQKCADFVHAFMLGFDVIDAIAL 120
           MD+YTPIYEQMKIDVRMNLKAR+VELKTR DTPDISNLQKCADFVHAFMLGFDVIDAIAL
Sbjct: 74  MDIYTPIYEQMKIDVRMNLKARRVELKTRPDTPDISNLQKCADFVHAFMLGFDVIDAIAL 133

Query: 121 LRLDELYIESFEIKDVKTLRGDHLSRAIGRLSGKGGKTKFAIENASKTRIVIADSKIHIL 180
           LRLDELYIESFEIKDVKTLRGDHLSRAIGRLSGKGGKTKFAIENASKTRIVIAD+KIHIL
Sbjct: 134 LRLDELYIESFEIKDVKTLRGDHLSRAIGRLSGKGGKTKFAIENASKTRIVIADTKIHIL 193

Query: 181 GSFANIKIARDSLCSLIMGSPAGKVYSKLRAVTSRLAERF 220
           GSFANIKIARDSLCSLI+GSPAGKVYSKLRAVT+RLAERF
Sbjct: 194 GSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF 233


>Glyma18g08080.1 
          Length = 220

 Score =  384 bits (985), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 187/220 (85%), Positives = 197/220 (89%)

Query: 1   MQSNEAPSTMEVEASPSXXXXXXXXXXXXXXXXXXMSDGQVQFRKVSVPPHRYTPLKKAW 60
           M+SN+  S+MEVE  PS                  MSDGQVQFRKV+VPPHRYTPLKKAW
Sbjct: 1   MESNQEASSMEVETVPSEAKLLPPKPKFEPLKPHEMSDGQVQFRKVNVPPHRYTPLKKAW 60

Query: 61  MDLYTPIYEQMKIDVRMNLKARKVELKTRRDTPDISNLQKCADFVHAFMLGFDVIDAIAL 120
           MD+Y+PIYEQMKIDVRMNLKAR+VELKTR DTPDISNLQKCADFVHAFMLGFDVIDAIAL
Sbjct: 61  MDIYSPIYEQMKIDVRMNLKARRVELKTRPDTPDISNLQKCADFVHAFMLGFDVIDAIAL 120

Query: 121 LRLDELYIESFEIKDVKTLRGDHLSRAIGRLSGKGGKTKFAIENASKTRIVIADSKIHIL 180
           LRLDELYIESFEIKDVKTLRGDHLSRAIGRLSGKGGKTKFAIENASKTRIVIAD+KIHIL
Sbjct: 121 LRLDELYIESFEIKDVKTLRGDHLSRAIGRLSGKGGKTKFAIENASKTRIVIADTKIHIL 180

Query: 181 GSFANIKIARDSLCSLIMGSPAGKVYSKLRAVTSRLAERF 220
           GSFANIKIARDSLCSLI+GSPAGKVYSKLRAVT+RLAERF
Sbjct: 181 GSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF 220


>Glyma08g44800.1 
          Length = 211

 Score =  367 bits (941), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 178/211 (84%), Positives = 188/211 (89%)

Query: 10  MEVEASPSXXXXXXXXXXXXXXXXXXMSDGQVQFRKVSVPPHRYTPLKKAWMDLYTPIYE 69
           M+V+  PS                  MSDGQVQFRKV+VPPHRYTPLKKAWMD+YTPIYE
Sbjct: 1   MDVDTVPSEVKLLPPKPKFEPLKPHEMSDGQVQFRKVNVPPHRYTPLKKAWMDIYTPIYE 60

Query: 70  QMKIDVRMNLKARKVELKTRRDTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIE 129
           QMKIDVRMNLK R++ELKTR DTPDISNLQKCADF HAFMLGFDVIDAIALLRLDELYIE
Sbjct: 61  QMKIDVRMNLKGRRIELKTRPDTPDISNLQKCADFAHAFMLGFDVIDAIALLRLDELYIE 120

Query: 130 SFEIKDVKTLRGDHLSRAIGRLSGKGGKTKFAIENASKTRIVIADSKIHILGSFANIKIA 189
           SFEIKDVKTLRGDHLSRAIGRLSGKGGKTKFAIENASKTRIVIAD+KIHILGSF+NIKIA
Sbjct: 121 SFEIKDVKTLRGDHLSRAIGRLSGKGGKTKFAIENASKTRIVIADTKIHILGSFSNIKIA 180

Query: 190 RDSLCSLIMGSPAGKVYSKLRAVTSRLAERF 220
           RDSLCSLI+GSPAGKVYSKLRAVT+RLAERF
Sbjct: 181 RDSLCSLILGSPAGKVYSKLRAVTARLAERF 211


>Glyma08g44870.1 
          Length = 174

 Score =  202 bits (513), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 112/185 (60%), Positives = 123/185 (66%), Gaps = 33/185 (17%)

Query: 36  MSDGQVQFRKVSVPPHRYTPLKKAWMDLYTPIYEQMKIDVRMNLKARKVELKTRRDTPDI 95
           MSDGQVQFRKV+VP H    LKKAWMD+YTPIY QMKIDVRMNLKAR++ELKTR DTPDI
Sbjct: 23  MSDGQVQFRKVNVPTH----LKKAWMDIYTPIYGQMKIDVRMNLKARRIELKTRPDTPDI 78

Query: 96  SNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGDHLSRAIGRLSGKG 155
           SNLQKCADFVH       +   +                        HL      +  +G
Sbjct: 79  SNLQKCADFVHCSSALSSLRSRML----------------------KHLEENTCLVLLEG 116

Query: 156 GKTKFAIENASKTRIVIADSKIHILGSFANIKIARDSLCSLIMGSPAGKVYSKLRAVTSR 215
              K        TRI IAD+KIHILGSFANIKIAR SLCSLI+GSPAGKVYSKLRAVT+R
Sbjct: 117 CLVKV-------TRIAIADTKIHILGSFANIKIARYSLCSLILGSPAGKVYSKLRAVTAR 169

Query: 216 LAERF 220
           LAERF
Sbjct: 170 LAERF 174