Miyakogusa Predicted Gene

Lj6g3v0670020.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0670020.1 Non Chatacterized Hit- tr|C6TCW0|C6TCW0_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,89.59,0,coiled-coil,NULL; no description,NULL; DNA-DAMAGE INDUCIBLE
PROTEIN DDI1 (V-SNARE-MASTER 1),NULL; AS,CUFF.58157.1
         (400 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g44820.1                                                       625   e-179
Glyma18g08070.1                                                       624   e-179
Glyma20g16710.1                                                        66   5e-11
Glyma08g44850.1                                                        50   4e-06

>Glyma08g44820.1 
          Length = 365

 Score =  625 bits (1613), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 306/343 (89%), Positives = 318/343 (92%)

Query: 1   MKITVMTADEQILTLDVDPNESVENVKALLEVETSVPLQKQQLLFNGKEVRNPEKLSALG 60
           MKITVMTADEQI+TLDVDP+ESVENVKALLEVETSV LQ+QQLLFNGKEVRN EKLSALG
Sbjct: 1   MKITVMTADEQIITLDVDPHESVENVKALLEVETSVALQQQQLLFNGKEVRNSEKLSALG 60

Query: 61  VKDDDLLMMVXXXXXXXXXXXXXXNDLSFNPDGSAVNPSAFQQHIRRDSNMMGQLFQSDP 120
           VKDDDLLMMV              NDLS N DGSAVNP AFQQHIRRDSN+MGQLFQSDP
Sbjct: 61  VKDDDLLMMVSGAGAGAAASSGSTNDLSLNTDGSAVNPGAFQQHIRRDSNLMGQLFQSDP 120

Query: 121 ELAQAILGNDLNRLQEILRLRHRQKDEYRRQKEEELALLYADPFDVEAQKKIEAAIRQKG 180
           ELAQAILGNDLN+LQE+LRLRH Q+DE +RQKEEELALLYADPFDVEAQKKIEAAIRQKG
Sbjct: 121 ELAQAILGNDLNKLQEVLRLRHHQRDELKRQKEEELALLYADPFDVEAQKKIEAAIRQKG 180

Query: 181 IDENWEAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAERLGLLRLL 240
           IDENW AALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAERLGLLRLL
Sbjct: 181 IDENWAAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAERLGLLRLL 240

Query: 241 DQRYKGIAHGVGQSEILGRIHVAPIKIGTIFYPCSFLVLDSPNMEFLFGLDMLRKHQCII 300
           DQRY+GIAHGVGQSEILGRIHVAPIKIG+IFYPCSFLVLDSPNMEFLFGLDMLRKHQCII
Sbjct: 241 DQRYRGIAHGVGQSEILGRIHVAPIKIGSIFYPCSFLVLDSPNMEFLFGLDMLRKHQCII 300

Query: 301 DLKDNVLRVGGGEVSVPFLQEKDIPSRFFDEEKLSKEASTSGG 343
           DLK+NVLRVGGGEVSVPFLQEKDIPSRF DEEK +KEAS SGG
Sbjct: 301 DLKENVLRVGGGEVSVPFLQEKDIPSRFLDEEKYAKEASGSGG 343


>Glyma18g08070.1 
          Length = 488

 Score =  624 bits (1610), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 305/350 (87%), Positives = 319/350 (91%)

Query: 1   MKITVMTADEQILTLDVDPNESVENVKALLEVETSVPLQKQQLLFNGKEVRNPEKLSALG 60
           MKITVMTADEQI+TLDVDP+ESVENVKALLEVETSVPLQ+QQLLFNGKEVRN EKLSALG
Sbjct: 1   MKITVMTADEQIITLDVDPHESVENVKALLEVETSVPLQQQQLLFNGKEVRNSEKLSALG 60

Query: 61  VKDDDLLMMVXXXXXXXXXXXXXXNDLSFNPDGSAVNPSAFQQHIRRDSNMMGQLFQSDP 120
           VKDDDLLMMV              NDLS N DGSAVNP +FQQHIR DSN+M QLFQSDP
Sbjct: 61  VKDDDLLMMVSGAGAGATASSGSTNDLSLNADGSAVNPGSFQQHIRHDSNLMSQLFQSDP 120

Query: 121 ELAQAILGNDLNRLQEILRLRHRQKDEYRRQKEEELALLYADPFDVEAQKKIEAAIRQKG 180
           ELAQAILGNDLN+LQE+LRLRH Q+DE +RQKEEELALLYADPFDVEAQKKIEAAIRQKG
Sbjct: 121 ELAQAILGNDLNKLQEVLRLRHHQRDELKRQKEEELALLYADPFDVEAQKKIEAAIRQKG 180

Query: 181 IDENWEAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAERLGLLRLL 240
           IDENW AALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAERLGLLRLL
Sbjct: 181 IDENWAAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAERLGLLRLL 240

Query: 241 DQRYKGIAHGVGQSEILGRIHVAPIKIGTIFYPCSFLVLDSPNMEFLFGLDMLRKHQCII 300
           DQRY+GIAHGVGQSEILGRIHVAPIKIG+IFYPCSFLVLDSPNMEFLFGLDMLRKHQCII
Sbjct: 241 DQRYRGIAHGVGQSEILGRIHVAPIKIGSIFYPCSFLVLDSPNMEFLFGLDMLRKHQCII 300

Query: 301 DLKDNVLRVGGGEVSVPFLQEKDIPSRFFDEEKLSKEASTSGGPVTSGSN 350
           DLK+NVLRVGGGEVSVPFLQEKDIPSRF DEEK +KEAS SGG     S+
Sbjct: 301 DLKENVLRVGGGEVSVPFLQEKDIPSRFLDEEKYAKEASGSGGQTKVSSS 350


>Glyma20g16710.1 
          Length = 42

 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 32/41 (78%), Positives = 36/41 (87%)

Query: 117 QSDPELAQAILGNDLNRLQEILRLRHRQKDEYRRQKEEELA 157
           QSDPEL QAILGNDLN+LQE+LRLRH Q+DE + QKEEEL 
Sbjct: 1   QSDPELEQAILGNDLNKLQEVLRLRHHQRDELKCQKEEELV 41


>Glyma08g44850.1 
          Length = 374

 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/29 (86%), Positives = 26/29 (89%)

Query: 372 FEAKVAKLVELGFGRDEVIQALQLCNGNE 400
           FEAKVAKLVELGF R+ VIQALQL NGNE
Sbjct: 336 FEAKVAKLVELGFERNAVIQALQLFNGNE 364