Miyakogusa Predicted Gene

Lj6g3v0647480.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0647480.1 Non Chatacterized Hit- tr|D8U4J9|D8U4J9_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,28.52,1e-17,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,Translocation protein Sec62; Sec62,Translocation protein
,CUFF.58107.1
         (364 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g07900.1                                                       613   e-175
Glyma08g45020.1                                                       606   e-173

>Glyma18g07900.1 
          Length = 357

 Score =  613 bits (1580), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 301/364 (82%), Positives = 324/364 (89%), Gaps = 10/364 (2%)

Query: 1   MKKSSGGAAEKKRVRRSSAPDLTSDAPPRKQAAKKDVFQVFAEKVRDHKDLVSRWAVLQE 60
           MKKSSG AA+KKRVRRSSA D TSDAPPRKQA KKDVF+VFAEKVRDHK+LVSRWAVLQE
Sbjct: 1   MKKSSGSAADKKRVRRSSALDPTSDAPPRKQAVKKDVFRVFAEKVRDHKELVSRWAVLQE 60

Query: 61  TRVEYFRGKDFASFLKNHPEVKDILESDRNLETEDIANILLAKNLLVRCDRVVKTVRPGK 120
           TRVEYFRGKDF SFLK+HPE+KD+LE DR LETE+IANILLAKNLLVRCDRVVKTVRPGK
Sbjct: 61  TRVEYFRGKDFVSFLKSHPELKDVLELDRILETEEIANILLAKNLLVRCDRVVKTVRPGK 120

Query: 121 KKLSTWPAHLEIFPEQIFSENDAFFAWTFAKRHPLWQTLLSFFWPVLTLAICLFPVYPHR 180
           KKLSTWPAHLEIFPEQ+FSENDAFFAWTF KRHPLWQTLLSFFWPVLTLAICLFPVYPHR
Sbjct: 121 KKLSTWPAHLEIFPEQVFSENDAFFAWTFVKRHPLWQTLLSFFWPVLTLAICLFPVYPHR 180

Query: 181 CKLLILYSCAGXXXXXXXXXXXRGAIFGALYIFLGKRVWFFPNILAEEATLGELFRFWPK 240
           CKLLILYSCAG           RG IFGALYI LGKR+WFFPNILAEEATL ELFRFWPK
Sbjct: 181 CKLLILYSCAGILFLILSLLLIRGTIFGALYIVLGKRIWFFPNILAEEATLRELFRFWPK 240

Query: 241 KDEEERPKWTTRIFYAVVAVLFILLLRHHAPDEAARARYQKRVSNIIDDVLEWSPSLALS 300
           KDEEE+PKWTTRIFYA VAVLFILLLRHHAPDEAARARYQKRVSNIIDDVLEWSP+LALS
Sbjct: 241 KDEEEKPKWTTRIFYAGVAVLFILLLRHHAPDEAARARYQKRVSNIIDDVLEWSPTLALS 300

Query: 301 GMMDKQQNVSNATGSSDAASQASQTGPEDAAPADG--SETFTEQYDTEEVMDNIEDAGEE 358
           G M+KQQNV+NATGS+D    AS+ GPEDA PADG  ++ F EQY+  EV+++++D    
Sbjct: 301 GRMEKQQNVANATGSAD----ASKNGPEDAVPADGDDAKAFVEQYNNTEVIEDVDD---- 352

Query: 359 DKQH 362
           DKQH
Sbjct: 353 DKQH 356


>Glyma08g45020.1 
          Length = 358

 Score =  606 bits (1563), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 302/367 (82%), Positives = 324/367 (88%), Gaps = 12/367 (3%)

Query: 1   MKKSSGGAAEKKRVRRSSAPDLTSDAPPRKQAAKKDVFQVFAEKVRDHKDLVSRWAVLQE 60
           MKKSSG AA+KKRVRRSSAPD TSDAPPRKQ  KKDVFQVFAEKVRDHK+LVSRWAVLQE
Sbjct: 1   MKKSSGSAADKKRVRRSSAPDPTSDAPPRKQVVKKDVFQVFAEKVRDHKELVSRWAVLQE 60

Query: 61  TRVEYFRGKDFASFLKNHPEVKDILESDRNLETEDIANILLAKNLLVRCDRVVKTVRPGK 120
           TRVEYFRGKDF SFLKNHPE+KD+LESDRNLETE+IANILLAKNLLVRCDRVVKTVRPGK
Sbjct: 61  TRVEYFRGKDFVSFLKNHPELKDVLESDRNLETEEIANILLAKNLLVRCDRVVKTVRPGK 120

Query: 121 KKLSTWPAHLEIFPEQIFSENDAFFAWTFAKRHPLWQTLLSFFWPVLTLAICLFPVYPHR 180
           KKLSTWPAHLEIFPEQ+FSENDAFFAWTF KRHPLWQTLLSFFWPVLTLAICLFPVYPHR
Sbjct: 121 KKLSTWPAHLEIFPEQVFSENDAFFAWTFVKRHPLWQTLLSFFWPVLTLAICLFPVYPHR 180

Query: 181 CKLLILYSCAGXXXXXXXXXXXRGAIFGALYIFLGKRVWFFPNILAEEATLGELFRFWPK 240
           CKLLILYSCAG           RG IFGALYI LGKR+WFFPNILAEEATL ELFRFWPK
Sbjct: 181 CKLLILYSCAGILFLILSLLLIRGTIFGALYIILGKRIWFFPNILAEEATLRELFRFWPK 240

Query: 241 KDEEERPKWTTRIFYAVVAVLFILLLRHHAPDEAARARYQKRVSNIIDDVLEWSPSLALS 300
           KDEEE+PKWTTR+FYA VAVLFILLLRHHAPDEAARARYQKRVSNIIDDVLEWSP+LALS
Sbjct: 241 KDEEEKPKWTTRLFYAGVAVLFILLLRHHAPDEAARARYQKRVSNIIDDVLEWSPTLALS 300

Query: 301 GMMDKQQNVSNATGSSDAASQASQTGPE--DAAPADGSETFTEQ-YDTEEVMDNIEDAGE 357
           GMMDKQQNV+NATGS+D    AS+ GPE    A  D ++ F EQ  +TEEV++++     
Sbjct: 301 GMMDKQQNVANATGSAD----ASKNGPEDAAPADGDDAKDFMEQDNNTEEVINDV----- 351

Query: 358 EDKQHHD 364
           +D +HHD
Sbjct: 352 DDDKHHD 358