Miyakogusa Predicted Gene

Lj6g3v0635240.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0635240.1 tr|I3SD25|I3SD25_LOTJA Proliferating cell nuclear
antigen OS=Lotus japonicus PE=2 SV=1,99.5,0,pcna: proliferating cell
nuclear antigen (pcna),Proliferating cell nuclear antigen, PCNA; no
descrip,NODE_1379_length_757_cov_141.096436.path2.1
         (199 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g45120.1                                                       387   e-108
Glyma18g07550.1                                                       384   e-107
Glyma13g02460.1                                                       183   1e-46
Glyma05g19680.1                                                       164   5e-41
Glyma14g01310.1                                                       164   7e-41
Glyma02g47440.1                                                       105   3e-23
Glyma18g04590.1                                                        59   5e-09

>Glyma08g45120.1 
          Length = 266

 Score =  387 bits (993), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 187/199 (93%), Positives = 193/199 (96%)

Query: 1   MGMNLSNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKISDFEMKLMDIDSEHLG 60
           MGMNL+NM+KMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKISDFEMKLMDIDSEHLG
Sbjct: 68  MGMNLNNMAKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKISDFEMKLMDIDSEHLG 127

Query: 61  IPEAEYHAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTKGDIGTANIVCRQNTS 120
           IPEAEYHAIV+MPS+EFARICKDLSSIGDTVVISVTKEGVKFSTKGDIGTANIVCRQNTS
Sbjct: 128 IPEAEYHAIVKMPSSEFARICKDLSSIGDTVVISVTKEGVKFSTKGDIGTANIVCRQNTS 187

Query: 121 VDKPEEATVIEMNEPVSLTFALRYMNSFTKATPLSSTVTISLSSELPVVVEYKIAEMGYV 180
           VDKPEEATVIEMNEPVSLTFALRYMNSFTKATPLS+TVTISLS+ELPVVVEYKIAEMGYV
Sbjct: 188 VDKPEEATVIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSNELPVVVEYKIAEMGYV 247

Query: 181 RFYLAPKIXXXXXXTKPQV 199
           RFYLAPKI      TKPQV
Sbjct: 248 RFYLAPKIEEDEEDTKPQV 266


>Glyma18g07550.1 
          Length = 266

 Score =  384 bits (987), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 185/199 (92%), Positives = 192/199 (96%)

Query: 1   MGMNLSNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKISDFEMKLMDIDSEHLG 60
           MGMNL+NM+KMLKCAGNDDIITIKADDGSDTVTFMFESP QDKISDFEMKLMDIDSEHLG
Sbjct: 68  MGMNLNNMAKMLKCAGNDDIITIKADDGSDTVTFMFESPAQDKISDFEMKLMDIDSEHLG 127

Query: 61  IPEAEYHAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTKGDIGTANIVCRQNTS 120
           IPEAEYHAIV+MPS+EFARICKDLSSIGDTVVIS+TKEGVKFSTKGDIGTANIVCRQNTS
Sbjct: 128 IPEAEYHAIVKMPSSEFARICKDLSSIGDTVVISITKEGVKFSTKGDIGTANIVCRQNTS 187

Query: 121 VDKPEEATVIEMNEPVSLTFALRYMNSFTKATPLSSTVTISLSSELPVVVEYKIAEMGYV 180
           VDKPEEATVIEMNEPVSLTFALRYMNSFTKATPLS+TVTISLS+ELPVVVEYKIAEMGYV
Sbjct: 188 VDKPEEATVIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSNELPVVVEYKIAEMGYV 247

Query: 181 RFYLAPKIXXXXXXTKPQV 199
           RFYLAPKI      TKPQV
Sbjct: 248 RFYLAPKIEEDEEDTKPQV 266


>Glyma13g02460.1 
          Length = 123

 Score =  183 bits (464), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 98/148 (66%), Positives = 110/148 (74%), Gaps = 28/148 (18%)

Query: 41  QDKISDFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGDTVVISVTKEGV 100
           QDKISDFEMKLMDID+E+LGI E  YH         FARICKDL+SI DT+VI +TKEGV
Sbjct: 1   QDKISDFEMKLMDIDNEYLGILEV-YH---------FARICKDLNSIDDTIVILITKEGV 50

Query: 101 KFSTKGDIGTANIVCRQNTSVDKPEEATVIEMNEPVSLTFALRYMNSFTKATPLSSTVTI 160
           KFSTKGDIGT NIVC+QNTS+DKPEEA++IEMNE                  PLS+ V I
Sbjct: 51  KFSTKGDIGTTNIVCKQNTSMDKPEEASIIEMNE------------------PLSNIVII 92

Query: 161 SLSSELPVVVEYKIAEMGYVRFYLAPKI 188
           SLS+EL VVVEYKI +MGYV FYLAPKI
Sbjct: 93  SLSNELSVVVEYKIVKMGYVCFYLAPKI 120


>Glyma05g19680.1 
          Length = 134

 Score =  164 bits (416), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 97/160 (60%), Positives = 104/160 (65%), Gaps = 28/160 (17%)

Query: 41  QDKISDFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLS--SIGDTVVISVTKE 98
           QDKISDFEMKLMDIDSEHLGI EA YH    MP       C  LS        V+ VT E
Sbjct: 1   QDKISDFEMKLMDIDSEHLGIQEA-YHV---MPLLR----CHPLSLLRFARISVVLVTLE 52

Query: 99  GVKFSTKGDIGTANIVCRQNTSVDKPEEATVIEMNEPVSLTFALRYMNSFTKATPLSSTV 158
           GVKFSTKGDIGT NIVC+QN  VDKPEEA VIEMNE                  PLS+T+
Sbjct: 53  GVKFSTKGDIGTTNIVCKQNNFVDKPEEAIVIEMNE------------------PLSNTI 94

Query: 159 TISLSSELPVVVEYKIAEMGYVRFYLAPKIXXXXXXTKPQ 198
           TISLS+E P VVEYKIA+MGYVRFYLA +I      TKPQ
Sbjct: 95  TISLSNEPPFVVEYKIAKMGYVRFYLALRIKEDEKDTKPQ 134


>Glyma14g01310.1 
          Length = 241

 Score =  164 bits (414), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 83/124 (66%), Positives = 98/124 (79%), Gaps = 3/124 (2%)

Query: 66  YHAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTKGDIGTANIVCRQNTSVDKP- 124
           YHAIV+MPSA+F+RIC DLS  GDTV I VT+EGV FSTK DIGT+ I CR NTSV K  
Sbjct: 118 YHAIVKMPSAKFSRICTDLSIFGDTVSIEVTEEGVGFSTKRDIGTSIIFCRHNTSVHKAD 177

Query: 125 EEATVIEMNEPVSLTFALRYMNSFTKATPLSSTVTISLSSE--LPVVVEYKIAEMGYVRF 182
           EEAT IEM + VSL F L ++NSFTKATPLS+TVTI LS++  LPVV +Y+I E G++RF
Sbjct: 178 EEATAIEMTQTVSLNFGLTFLNSFTKATPLSNTVTIFLSNQLHLPVVFQYQIGEKGHLRF 237

Query: 183 YLAP 186
           YL P
Sbjct: 238 YLKP 241


>Glyma02g47440.1 
          Length = 251

 Score =  105 bits (262), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/192 (39%), Positives = 102/192 (53%), Gaps = 21/192 (10%)

Query: 1   MGMNLSNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKISDFEMKL-MDIDS-EH 58
           +G++L  M ++L  A + DI+++ A +G D VTF F+ P+    SD  M L MDID+   
Sbjct: 68  VGLSLDQMLQLLHRAHDSDIVSLTALEGQDHVTFTFQCPSNLSFSDHRMNLMMDIDNGPL 127

Query: 59  LGIPE-AEYHAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTKGDIGTANIVCRQ 117
           L I E AEYHAIV +PS  F  IC  + S+ +     +      +  K   G + +V R+
Sbjct: 128 LDIHEDAEYHAIVELPSPVFTTICCHIDSLSN-----IRTYNFHYCHK---GYSYLVGRR 179

Query: 118 NTSVD--------KPEEATVIEMNEPVSLTFALRYMNSFTKATPLSSTVTISLSSELP-V 168
                         P   TVIEM + VSL F +RY+N    A  LS T+TI LS ELP  
Sbjct: 180 WRFWSLHALEYYIMPRGGTVIEMTQCVSLAFEIRYLNLVMAAMSLSDTLTIRLSMELPEA 239

Query: 169 VVEYKI-AEMGY 179
           V EYKI AE GY
Sbjct: 240 VFEYKIAAEKGY 251


>Glyma18g04590.1 
          Length = 228

 Score = 58.5 bits (140), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 31/49 (63%), Positives = 34/49 (69%), Gaps = 8/49 (16%)

Query: 40  TQDKISDFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIG 88
           +QDKI DFEMKLMDIDSEHLGIPEA YHAI  +        C  LS +G
Sbjct: 93  SQDKIYDFEMKLMDIDSEHLGIPEA-YHAISLLR-------CHPLSLLG 133