Miyakogusa Predicted Gene

Lj6g3v0635190.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0635190.3 Non Chatacterized Hit- tr|G7LHI5|G7LHI5_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,33.73,1e-17,Transposase_24,Transposase, Ptta/En/Spm,
plant,CUFF.58093.3
         (176 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g35310.1                                                       170   7e-43
Glyma04g30640.1                                                       112   2e-25
Glyma11g03020.1                                                        60   1e-09

>Glyma15g35310.1 
          Length = 1053

 Score =  170 bits (430), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 83/135 (61%), Positives = 102/135 (75%), Gaps = 4/135 (2%)

Query: 31  PNGIDKDQWVRFVQYRMKPSTQERCRKNKENRSKQVIPHTGGSKANSRRRHEIFLETGKL 90
           P+G+ K  +    +  +K    E C +NKE RSKQVIPHTGGSKAN RRR+E+ LETGKL
Sbjct: 839 PSGVPKAYFDNCFETILK----ELCWRNKEIRSKQVIPHTGGSKANPRRRNELLLETGKL 894

Query: 91  PSRAQMYILTHTKKDGSFVNDAAKGVVEKLEVGLTQSTVDETQISPSDTLGITLGEEHSG 150
           PS  Q+YI TH +KDGSFVN+AAK + E++EVGLTQS VDE+++SP D +G  LG EHSG
Sbjct: 895 PSHGQLYIETHKRKDGSFVNEAAKTIAEQIEVGLTQSIVDESEVSPLDVVGRVLGLEHSG 954

Query: 151 RVRCMGMGATPSNTI 165
           RVRCMG+G  PSNT 
Sbjct: 955 RVRCMGLGVVPSNTF 969


>Glyma04g30640.1 
          Length = 2354

 Score =  112 bits (281), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 52/116 (44%), Positives = 77/116 (66%)

Query: 1    MGKKWSAHKQRLWSEFNIPTKTIDEIIRNVPNGIDKDQWVRFVQYRMKPSTQERCRKNKE 60
            M +K+   K +LW+    P+ + +++I  VP GI +DQW+ F+   +KP  QE CRKN  
Sbjct: 2236 MSRKYRNGKHKLWTSAFDPSLSREQLIAKVPYGIPEDQWLSFIDNHLKPEYQELCRKNAV 2295

Query: 61   NRSKQVIPHTGGSKANSRRRHEIFLETGKLPSRAQMYILTHTKKDGSFVNDAAKGV 116
             R KQ +PHTGG+K  SR++HE+ +E G+  SR ++YI T  KKDGSFVN+ A+ +
Sbjct: 2296 VRQKQTVPHTGGAKLLSRKQHEMEVELGRPISRVELYIATRKKKDGSFVNEEARSI 2351


>Glyma11g03020.1 
          Length = 736

 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 22/179 (12%)

Query: 2   GKKWSAHKQRLWSEFNIPTKTIDEIIRNVPNGIDKDQWVRFVQYRMKPSTQERCRKNKEN 61
           G++W   K +L S F I  K  D+   +    + KD W RFV+ R+ P+ QE+ +K +E 
Sbjct: 116 GQRWRGFKTQL-SSFYIYGKYKDKSPCDKYTFLKKDTWQRFVESRLDPAFQEKRKKAQEV 174

Query: 62  RSKQVIPHT---GG----------------SKANSRRRHEIFLETGKLPSRAQMYILTHT 102
           ++  + PHT   GG                 +A+      + +E      R + +     
Sbjct: 175 QANNLYPHTLSCGGYQKLEENMMQEKAKKVQEASQLDHSLVIVEPPSPLKRHEKWKRARQ 234

Query: 103 KKDGSFVNDAAKGVVEKLEVGLTQSTVDE-TQISPSDTLGITLGE-EHSGRVRCMGMGA 159
           KK G ++N+ ++ + EK++  + QST      +   D L + +G+ EH GRVR  G G 
Sbjct: 235 KKSGDYINEESRIIAEKIDSLVEQSTQGSFLPLGREDILTVAIGQPEHPGRVRGAGRGV 293