Miyakogusa Predicted Gene

Lj6g3v0609710.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0609710.1 tr|B9GIU6|B9GIU6_POPTR Predicted protein
(Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_172390
PE=3,96.91,0,ThiC,Thiamine biosynthesis protein ThiC; THIAMINE
BIOSYNTHESIS PROTEIN THIC,NULL; thiC: thiamine
bio,NODE_6139_length_1701_cov_784.365662.path1.1
         (453 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g07290.1                                                       916   0.0  
Glyma11g26470.1                                                       909   0.0  

>Glyma18g07290.1 
          Length = 647

 Score =  916 bits (2367), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/453 (95%), Positives = 446/453 (98%), Gaps = 1/453 (0%)

Query: 1   MYFAKQGIITEEMLYCAAREKLDPEFVRSEVARGRAIIPSNKKHLELEPMIVGRNFLVKV 60
           MY+AKQGIITEEMLYCA RE LDPEFVRSEVARGRAIIPSNKKHLELEPMIVGRNFLVKV
Sbjct: 170 MYYAKQGIITEEMLYCATRENLDPEFVRSEVARGRAIIPSNKKHLELEPMIVGRNFLVKV 229

Query: 61  NANIGNSAVASSIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPI 120
           NANIGNSAVASSIEEEVYKVQWATMWGADT MDLSTGRHIHETREWILRNSAVPVGTVPI
Sbjct: 230 NANIGNSAVASSIEEEVYKVQWATMWGADTAMDLSTGRHIHETREWILRNSAVPVGTVPI 289

Query: 121 YQALEKVNGIAEDLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGG 180
           YQALEKVNGIAEDL+WEVFRDTLIEQAEQGVDYFTIHAGVLLRY+PLTA+RMTGIVSRGG
Sbjct: 290 YQALEKVNGIAEDLNWEVFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTARRMTGIVSRGG 349

Query: 181 SIHAKWCLAYHKENFAYEHWDDILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQ 240
           SIHAKWCLAYHKENFAYEHWD+ILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQ
Sbjct: 350 SIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQ 409

Query: 241 GELTRRAWEKDVQVMNEGPGHVPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHI 300
           GELTRRAWEKDVQVMNEGPGH+PMHKIPENMQKQLEWC+EAPFYTLGPLTTDIAPGYDHI
Sbjct: 410 GELTRRAWEKDVQVMNEGPGHIPMHKIPENMQKQLEWCSEAPFYTLGPLTTDIAPGYDHI 469

Query: 301 TSAIGAANIGALGTALLCYVTPKEHLGLPNRDDVKTGVIAYKIAAHAADLAKGHPHAQEW 360
           TSAIGAANIGALGTALLCYVTPKEHLGLPNRDDVK GVIAYKIAAHAADLAKGHP+AQ W
Sbjct: 470 TSAIGAANIGALGTALLCYVTPKEHLGLPNRDDVKAGVIAYKIAAHAADLAKGHPYAQAW 529

Query: 361 DDALSKARFEFRWMDQFALSLDPMTAMSFHDESLPSEGAKVAHFCSMCGPKFCSMKITED 420
           DDALSKARFEFRWMDQFALSLDPMTAMSFHDE+LP++GAKVAHFCSMCGPKFCSMKITED
Sbjct: 530 DDALSKARFEFRWMDQFALSLDPMTAMSFHDETLPADGAKVAHFCSMCGPKFCSMKITED 589

Query: 421 VRKYAEKHGYGTAEEALLRGMDAMSAEFQSAKK 453
           VRKYAE+HGYGT +EAL RGMDAMSAEFQ+AKK
Sbjct: 590 VRKYAEEHGYGT-DEALQRGMDAMSAEFQAAKK 621


>Glyma11g26470.1 
          Length = 648

 Score =  909 bits (2350), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/453 (94%), Positives = 443/453 (97%), Gaps = 1/453 (0%)

Query: 1   MYFAKQGIITEEMLYCAAREKLDPEFVRSEVARGRAIIPSNKKHLELEPMIVGRNFLVKV 60
           MY+AKQGIITEEMLYCA RE LDPEFVRSEVARGRAIIPSNKKHLELEPMIVGRNFLVKV
Sbjct: 170 MYYAKQGIITEEMLYCATRENLDPEFVRSEVARGRAIIPSNKKHLELEPMIVGRNFLVKV 229

Query: 61  NANIGNSAVASSIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPI 120
           NANIGNSAVASSIEEEVYKVQWATMWGADT MDLSTGRHIHETREWILRNSAVP+GTVPI
Sbjct: 230 NANIGNSAVASSIEEEVYKVQWATMWGADTAMDLSTGRHIHETREWILRNSAVPIGTVPI 289

Query: 121 YQALEKVNGIAEDLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGG 180
           YQALEKVNGIAEDL+W+VFRDTLIEQAEQGVDYFTIHAGVLLRY+PLTAKRMTGIVSRGG
Sbjct: 290 YQALEKVNGIAEDLNWKVFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRMTGIVSRGG 349

Query: 181 SIHAKWCLAYHKENFAYEHWDDILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQ 240
           SIHAKWCLAYHKENFAYEHWD+ILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQ
Sbjct: 350 SIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQ 409

Query: 241 GELTRRAWEKDVQVMNEGPGHVPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHI 300
           GELTRRAWEKDVQVMNEGPGHVPMHKIPENMQKQLEWC+EAPFYTLGPLTTDIAPGYDHI
Sbjct: 410 GELTRRAWEKDVQVMNEGPGHVPMHKIPENMQKQLEWCSEAPFYTLGPLTTDIAPGYDHI 469

Query: 301 TSAIGAANIGALGTALLCYVTPKEHLGLPNRDDVKTGVIAYKIAAHAADLAKGHPHAQEW 360
           TSAIGAANIGALGTALLCYVTPKEHLGLPNRDDVK GVIAYKIAAHAADLAKGHP+AQ W
Sbjct: 470 TSAIGAANIGALGTALLCYVTPKEHLGLPNRDDVKAGVIAYKIAAHAADLAKGHPYAQAW 529

Query: 361 DDALSKARFEFRWMDQFALSLDPMTAMSFHDESLPSEGAKVAHFCSMCGPKFCSMKITED 420
           DD LSKARFEFRWMDQFALSLDPMTA SFHDE+LP++GAKVAHFCSMCGPKFCSMKITED
Sbjct: 530 DDELSKARFEFRWMDQFALSLDPMTATSFHDETLPADGAKVAHFCSMCGPKFCSMKITED 589

Query: 421 VRKYAEKHGYGTAEEALLRGMDAMSAEFQSAKK 453
           VRKYA +HGYGT +EAL RGMDAMSAEFQ+AKK
Sbjct: 590 VRKYAAEHGYGT-DEALQRGMDAMSAEFQAAKK 621