Miyakogusa Predicted Gene

Lj6g3v0574840.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0574840.1 Non Chatacterized Hit- tr|K4BY95|K4BY95_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,48.84,0.000000000000002,SUBFAMILY NOT NAMED,NULL; COILIN
P80,Coilin; seg,NULL,CUFF.58298.1
         (403 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g37740.1                                                       434   e-122
Glyma18g01670.1                                                       370   e-102

>Glyma11g37740.1 
          Length = 637

 Score =  434 bits (1116), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 253/460 (55%), Positives = 307/460 (66%), Gaps = 57/460 (12%)

Query: 1   MSTTDNLALITEVHKDESGRFKGHIHQQSSVAEKD-----------------NKSSNDQS 43
           +ST +NL++I +VH++E+G  +GHIH Q SV +KD                 NK  ND+S
Sbjct: 178 LSTAENLSVIPQVHEEENGSSEGHIHHQLSVVKKDKKKHSNLSSQSNKSSNLNKQKNDKS 237

Query: 44  EPTNDKTRFLQPQDESETKKVPXXXXXXXXXX----XXXXXXXXXXXXXXNTSPVLEKDE 99
           +PT+D+TRF+QPQDESETKK+P                            + +PVLEKD 
Sbjct: 238 DPTSDETRFVQPQDESETKKLPSRSARRKKAKRRWLRELKLENEMKEKKPHQTPVLEKDG 297

Query: 100 Q-LPIKDNNCKVSDVNQQXXXXXXXXDDVIPVEIRPGHIRFQPLRKDQE--VPQNQFPVE 156
           Q LPIKDNNC VSDV+Q+        DD++PVEIRPGHIRF+PL+KDQ+  V Q+QFPVE
Sbjct: 298 QELPIKDNNCVVSDVHQKPDEESGEEDDIVPVEIRPGHIRFEPLKKDQDQAVTQDQFPVE 357

Query: 157 TFCWNGITSKKKGQKWGKERISSWKQDDHENSSQEWRAAQKAEREHLSNPVDFEKLTP-Y 215
            F WNGIT+KKKGQKWGKER+S  KQD +E+SSQ+    + AE+E  SN +DF+KL P Y
Sbjct: 358 IFQWNGITNKKKGQKWGKERMSFRKQDGYEHSSQDCPTVRNAEKEQPSNAIDFDKLKPYY 417

Query: 216 TSLPKEGDVIAYRLIELSSSWTPELSSFRVGKISQYDAKSNRICLEPVSEFPFVLEEKTD 275
           TSLPKEGDVIAYRLIEL++SWTPELSSFRVGKIS+YDAKSNRI LEPV E+PF  ++K D
Sbjct: 418 TSLPKEGDVIAYRLIELTASWTPELSSFRVGKISRYDAKSNRIWLEPVLEYPFDFKKKID 477

Query: 276 QETSSGQPDPPLYQEDGSLEVEYTSLADVRMVKHXXXXXXXXXXXXXXLVN--------- 326
           ++ SS Q +P  YQE+GSLE+EYTSLADVRMVKH               V          
Sbjct: 478 EDASSVQYNPSPYQENGSLEIEYTSLADVRMVKHGNPDLKTVVVSSDAWVKTTKATNDIT 537

Query: 327 ----PPKATNGSTDEK------------------PAKENGGVSVWDEINEALNAKKAKLS 364
                 KATNGSTDEK                   AKENG V+VWDEINEAL AKKAKLS
Sbjct: 538 KEKLAAKATNGSTDEKLAADQTTMGSCQPERGHITAKENGEVNVWDEINEALKAKKAKLS 597

Query: 365 QENGWTK-EETTGTRSWSYRAMRGSALGPTMARLRSQNQL 403
           +E+GW++  E++ TRSWS+RAMR SALGPTMA LRS N L
Sbjct: 598 KEDGWSRGGESSSTRSWSHRAMRCSALGPTMALLRSNNGL 637


>Glyma18g01670.1 
          Length = 559

 Score =  370 bits (951), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 234/482 (48%), Positives = 281/482 (58%), Gaps = 84/482 (17%)

Query: 1   MSTTDNLALITEVHK----------DESGRFKGHIHQQSSVAEKD---NKSSNDQSEP-- 45
           +ST +NL++  +VH+          +E+G F G+IH Q S+  K    NK  ND+S+P  
Sbjct: 83  LSTAENLSVTPKVHEKENGSSEGHEEENGSFDGYIHHQLSLPNKSSNLNKQKNDKSDPTI 142

Query: 46  ----TNDKTRFLQ-----------PQDESETKKVPXXXXXXXXXXXXXXXXXXXXXXXXN 90
               ++ K R  Q           P   +  KK                          +
Sbjct: 143 NTSISSQKNRGCQVFIYLILFCQLPSRSARRKKAKRRWLRELKLEKEKEKEELLHSSNND 202

Query: 91  TSP---------------VLEKDEQ-LPIKDNNCKVSDVNQQXXXXXXXXDDVIPVEIRP 134
            SP               VLEK  Q LPI DNNC VSDV+QQ        DD+ PVEIRP
Sbjct: 203 CSPLPASSCHLQRLHQTPVLEKGGQELPINDNNCVVSDVHQQPDEESEEEDDIAPVEIRP 262

Query: 135 GHIRFQPLRKDQEVPQN-QFPVETFCWNGITSKKKGQKWGKERISSWKQDDHENSSQEWR 193
           GHIRF+PL+K      + +F  ETF WNGIT+KKKGQKWGKER+   KQD +E+S Q+  
Sbjct: 263 GHIRFEPLKKGLHADLSYKFLKETFQWNGITNKKKGQKWGKERMPFRKQDGYEDSGQDCP 322

Query: 194 AAQKAEREHLSNPVDFEKLTPYTSLPKEGDVIAYRLIELSSSWTPELSSFRVGKISQYDA 253
             Q AE+E  SN +DF+KL  YTSLPKEGDVIAYRLIEL++SWTPELSSFRVGKIS+YDA
Sbjct: 323 TVQNAEKEQTSNVIDFDKLKHYTSLPKEGDVIAYRLIELTASWTPELSSFRVGKISRYDA 382

Query: 254 KSNRICLEPVSEFPFVLEEKTDQETSSGQPDPPLYQEDGSLEVEYTSLADVRMVKHXXXX 313
           KSNRI LEPV E+PF  ++K D++ SS Q DP  YQEDGSLE+EYT LADVRMVKH    
Sbjct: 383 KSNRIWLEPVLEYPFDFKKKIDEDASSVQYDPSPYQEDGSLEIEYTLLADVRMVKH---- 438

Query: 314 XXXXXXXXXXLVNPPKAT-------------NGSTDEK------------------PAKE 342
                     LVNP KAT             NGST EK                   AKE
Sbjct: 439 -GIPDLKSDALVNPTKATNDITNEKLAAKAINGSTGEKLAGDQTTVGSCHPERGHITAKE 497

Query: 343 NGGVSVWDEINEALNAKKAKLSQENGWTK-EETTGTRSWSYRAMRGSALGPTMARLRSQN 401
           NG V+VWD+INEAL AKKAKLSQE+ W++  E++ TRSWS+RAMR SALGPTMA LRS N
Sbjct: 498 NGEVNVWDKINEALKAKKAKLSQEDCWSRGGESSSTRSWSHRAMRCSALGPTMALLRSNN 557

Query: 402 QL 403
            L
Sbjct: 558 GL 559