Miyakogusa Predicted Gene

Lj6g3v0528590.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0528590.1 Non Chatacterized Hit- tr|J3N4T9|J3N4T9_ORYBR
Uncharacterized protein OS=Oryza brachyantha GN=OB10G2,53.26,4e-19,
,CUFF.58017.1
         (91 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g46580.2                                                       156   5e-39
Glyma06g46580.1                                                       156   5e-39
Glyma02g18260.4                                                       145   8e-36
Glyma02g18260.3                                                       145   8e-36
Glyma02g18260.2                                                       145   8e-36
Glyma02g18260.1                                                       145   8e-36
Glyma04g16400.1                                                       141   2e-34
Glyma01g38260.1                                                        65   2e-11
Glyma11g07320.1                                                        64   5e-11

>Glyma06g46580.2 
          Length = 94

 Score =  156 bits (394), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 79/94 (84%), Positives = 83/94 (88%), Gaps = 3/94 (3%)

Query: 1  MSTQTSQPEKQSSSVAT---VASCRKKKSEEATFLEDVKDHIDEFINASMDEHKTCFKKT 57
          M TQ SQPEKQSSS AT   V SCRKKK+EEA FL+D+KDHIDEFINASMDEHKTCFKKT
Sbjct: 1  MDTQKSQPEKQSSSTATAPSVTSCRKKKNEEAAFLDDLKDHIDEFINASMDEHKTCFKKT 60

Query: 58 IQKMFGLSKAVAEKNSNAVKEVESSLPLQTTVQD 91
          IQKMFG+SKAVAE  SNA KEVESSLPLQTTVQD
Sbjct: 61 IQKMFGMSKAVAEGQSNASKEVESSLPLQTTVQD 94


>Glyma06g46580.1 
          Length = 94

 Score =  156 bits (394), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 79/94 (84%), Positives = 83/94 (88%), Gaps = 3/94 (3%)

Query: 1  MSTQTSQPEKQSSSVAT---VASCRKKKSEEATFLEDVKDHIDEFINASMDEHKTCFKKT 57
          M TQ SQPEKQSSS AT   V SCRKKK+EEA FL+D+KDHIDEFINASMDEHKTCFKKT
Sbjct: 1  MDTQKSQPEKQSSSTATAPSVTSCRKKKNEEAAFLDDLKDHIDEFINASMDEHKTCFKKT 60

Query: 58 IQKMFGLSKAVAEKNSNAVKEVESSLPLQTTVQD 91
          IQKMFG+SKAVAE  SNA KEVESSLPLQTTVQD
Sbjct: 61 IQKMFGMSKAVAEGQSNASKEVESSLPLQTTVQD 94


>Glyma02g18260.4 
          Length = 87

 Score =  145 bits (367), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 68/80 (85%), Positives = 76/80 (95%)

Query: 12 SSSVATVASCRKKKSEEATFLEDVKDHIDEFINASMDEHKTCFKKTIQKMFGLSKAVAEK 71
          SSS A V SCRKKK+EEATFLED+KDHIDEFINASMDEHKTCFKKT+QKMFG+SKAVAE+
Sbjct: 8  SSSAAAVTSCRKKKNEEATFLEDLKDHIDEFINASMDEHKTCFKKTVQKMFGMSKAVAER 67

Query: 72 NSNAVKEVESSLPLQTTVQD 91
          ++NA KEVESSLPLQTT+QD
Sbjct: 68 DTNAAKEVESSLPLQTTLQD 87


>Glyma02g18260.3 
          Length = 87

 Score =  145 bits (367), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 68/80 (85%), Positives = 76/80 (95%)

Query: 12 SSSVATVASCRKKKSEEATFLEDVKDHIDEFINASMDEHKTCFKKTIQKMFGLSKAVAEK 71
          SSS A V SCRKKK+EEATFLED+KDHIDEFINASMDEHKTCFKKT+QKMFG+SKAVAE+
Sbjct: 8  SSSAAAVTSCRKKKNEEATFLEDLKDHIDEFINASMDEHKTCFKKTVQKMFGMSKAVAER 67

Query: 72 NSNAVKEVESSLPLQTTVQD 91
          ++NA KEVESSLPLQTT+QD
Sbjct: 68 DTNAAKEVESSLPLQTTLQD 87


>Glyma02g18260.2 
          Length = 87

 Score =  145 bits (367), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 68/80 (85%), Positives = 76/80 (95%)

Query: 12 SSSVATVASCRKKKSEEATFLEDVKDHIDEFINASMDEHKTCFKKTIQKMFGLSKAVAEK 71
          SSS A V SCRKKK+EEATFLED+KDHIDEFINASMDEHKTCFKKT+QKMFG+SKAVAE+
Sbjct: 8  SSSAAAVTSCRKKKNEEATFLEDLKDHIDEFINASMDEHKTCFKKTVQKMFGMSKAVAER 67

Query: 72 NSNAVKEVESSLPLQTTVQD 91
          ++NA KEVESSLPLQTT+QD
Sbjct: 68 DTNAAKEVESSLPLQTTLQD 87


>Glyma02g18260.1 
          Length = 87

 Score =  145 bits (367), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 68/80 (85%), Positives = 76/80 (95%)

Query: 12 SSSVATVASCRKKKSEEATFLEDVKDHIDEFINASMDEHKTCFKKTIQKMFGLSKAVAEK 71
          SSS A V SCRKKK+EEATFLED+KDHIDEFINASMDEHKTCFKKT+QKMFG+SKAVAE+
Sbjct: 8  SSSAAAVTSCRKKKNEEATFLEDLKDHIDEFINASMDEHKTCFKKTVQKMFGMSKAVAER 67

Query: 72 NSNAVKEVESSLPLQTTVQD 91
          ++NA KEVESSLPLQTT+QD
Sbjct: 68 DTNAAKEVESSLPLQTTLQD 87


>Glyma04g16400.1 
          Length = 167

 Score =  141 bits (355), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 71/94 (75%), Positives = 80/94 (85%), Gaps = 3/94 (3%)

Query: 1   MSTQTSQPEKQSSSVAT---VASCRKKKSEEATFLEDVKDHIDEFINASMDEHKTCFKKT 57
           M TQ SQPEKQSSS AT   V SC+KKK+EEA FL+D+KDHIDEFI ASMDEHK+CFKK 
Sbjct: 74  MDTQKSQPEKQSSSAATAPSVTSCQKKKNEEAAFLDDLKDHIDEFIKASMDEHKSCFKKI 133

Query: 58  IQKMFGLSKAVAEKNSNAVKEVESSLPLQTTVQD 91
           IQKMFG+SK VAE +SNA KE++SSL LQTTVQD
Sbjct: 134 IQKMFGMSKTVAEGHSNASKEIQSSLHLQTTVQD 167


>Glyma01g38260.1 
          Length = 116

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/71 (42%), Positives = 51/71 (71%), Gaps = 2/71 (2%)

Query: 21  CRKKKSEEATFLEDVKDHIDEFINASMDEHKTCFKKTIQKMFGLSKAVAEKNSNAVKEVE 80
           C++KKSE  +F+ ++++H  EFI+AS DEHKTC + TIQK+   SK +  K+ ++  E +
Sbjct: 48  CQRKKSENGSFVSNLRNHFHEFIHASADEHKTCLRNTIQKILNASK-IFGKDRDSTNEGD 106

Query: 81  SSLPLQTTVQD 91
            S+PLQ++ ++
Sbjct: 107 -SVPLQSSTKN 116


>Glyma11g07320.1 
          Length = 84

 Score = 63.5 bits (153), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 55/86 (63%), Gaps = 4/86 (4%)

Query: 6  SQPEKQSSSVATVASCRKKKSEEATFLEDVKDHIDEFINASMDEHKTCFKKTIQKMFGLS 65
          S  EK+ +S   V+ C++KKS   +F+ ++++H  EFI+AS DEHK C + TIQK+   S
Sbjct: 3  SNNEKRPAS--RVSFCQRKKSGNGSFVSNLRNHFHEFIHASSDEHKRCLRNTIQKILDAS 60

Query: 66 KAVAEKNSNAVKEVESSLPLQTTVQD 91
          K    KN ++  E E  +PLQ++ ++
Sbjct: 61 KIFG-KNGDSTNEGE-YVPLQSSTKN 84