Miyakogusa Predicted Gene

Lj6g3v0528580.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0528580.1 Non Chatacterized Hit- tr|D8UI90|D8UI90_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,26.92,0.00002,seg,NULL; TBCC,Tubulin binding cofactor C;
C_CAP_COFACTOR_C,C-CAP/cofactor C-like domain; Domain in ,CUFF.58016.1
         (353 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g14330.1                                                       479   e-135
Glyma05g31140.1                                                       450   e-127

>Glyma08g14330.1 
          Length = 336

 Score =  479 bits (1233), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 236/332 (71%), Positives = 266/332 (80%), Gaps = 5/332 (1%)

Query: 22  QKKHLSMLERLSKRHQQQPXXXXXXXXXXXXXXXXXXXXDLKASIDSRLAESQSISSDPS 81
           QKKHL+MLERLSKR Q +                      LK+SI+S+LA+SQSISSDPS
Sbjct: 10  QKKHLAMLERLSKRTQSRSQNPDSSSSESSTSSILSRFTHLKSSIESQLAQSQSISSDPS 69

Query: 82  QLKTHFNDITASISDLEKLVAENSYLLPSYDVRSSLKTVSDLKRSLDSLASELIPKKKFS 141
            LK HFN I+ SISDLEK VAENSY LPSYDVR+SLKTVSDLK SLD L S+L+PKKKFS
Sbjct: 70  NLKLHFNQISESISDLEKFVAENSYSLPSYDVRTSLKTVSDLKHSLDDLTSQLLPKKKFS 129

Query: 142 FKSKNATAKRDKDSVVPEPKQTPPPDRDSVKSSFVPRDSPGFRNETGRVLVEEFRGSEVG 201
           FK+K  T K  KDS +P P Q P      + +   PRDSPGFRN+T  +L+ +FRGSEVG
Sbjct: 130 FKNKPTTKKEYKDSAIPLPTQPP-----QLSTRLAPRDSPGFRNKTAELLISDFRGSEVG 184

Query: 202 EFTVSDLDSCEVRIIGCVRALFVHRLKNCRVYVGPVTGSVLIEGVEGCVFALASHQIRIH 261
           EFTVSDLDSC+VRIIG VRALFVHRLKN RVYVGPVTGSVLIE  EGCVF LASHQIRIH
Sbjct: 185 EFTVSDLDSCQVRIIGSVRALFVHRLKNSRVYVGPVTGSVLIEEAEGCVFVLASHQIRIH 244

Query: 262 GARGSDFYLRVRSRPIIEDSNGVRFAPYCLSYQGIEEDLRGAGLDAETGNWANVDDFKWL 321
           GA+ SDFYLRVRSRPIIED NGVRFAPYCL+Y+GIEEDLRGAGLDAETGNW+NVDDF+WL
Sbjct: 245 GAKRSDFYLRVRSRPIIEDCNGVRFAPYCLNYEGIEEDLRGAGLDAETGNWSNVDDFRWL 304

Query: 322 RAVQSPNWSILPEDERIGIVDISNSENGKEEI 353
           RAVQSPNWS+LPE+ER+G V+ISN +N  +EI
Sbjct: 305 RAVQSPNWSVLPENERVGTVEISNLKNEDKEI 336


>Glyma05g31140.1 
          Length = 329

 Score =  450 bits (1158), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 234/340 (68%), Positives = 263/340 (77%), Gaps = 23/340 (6%)

Query: 22  QKKHLSMLERLSKRHQ---QQPXXXXXXXXXXXXXXXXXXXXDLKASIDSRLAESQSISS 78
           QKKHL+MLERLSKR Q   Q P                     LK SI+S+LA+SQSISS
Sbjct: 5   QKKHLAMLERLSKRTQIRSQNPESSSILSRFS----------HLKTSIESQLAQSQSISS 54

Query: 79  DPSQLKTHFNDITASISDLEKLVAENSYLLPSYDVRSSLKTVSDLKRSLDSLASELIPKK 138
           DPS LK H N I+ SISDLEKLVAENSY LPSYDVR+SLKTVSDLK SLD L S+L+PKK
Sbjct: 55  DPSNLKLHINQISQSISDLEKLVAENSYSLPSYDVRTSLKTVSDLKHSLDDLTSQLLPKK 114

Query: 139 KFSFKSK-----NATAKRDKDSVVPEPKQTPPPDRDSVKSSFVPRDSPGFRNETGRVLVE 193
           KFSFK+K          +DKD  +P PKQ P      + +   PRDSPGFRN+TG +L+ 
Sbjct: 115 KFSFKNKPPTTTTKKDDKDKDCAIPLPKQPP-----QLSTLLAPRDSPGFRNKTGELLIA 169

Query: 194 EFRGSEVGEFTVSDLDSCEVRIIGCVRALFVHRLKNCRVYVGPVTGSVLIEGVEGCVFAL 253
           +F  SEVGEFTVSDLDSC+VRIIG VRALFVH LKN RVYVGPVTGSVLIE   GCVFAL
Sbjct: 170 DFSDSEVGEFTVSDLDSCQVRIIGSVRALFVHGLKNSRVYVGPVTGSVLIEEAVGCVFAL 229

Query: 254 ASHQIRIHGARGSDFYLRVRSRPIIEDSNGVRFAPYCLSYQGIEEDLRGAGLDAETGNWA 313
           ASHQIRIHGA+ SDFYLRVRSRPIIED +GVRFAPYCL Y+GIEEDLRG GLDAETGNW+
Sbjct: 230 ASHQIRIHGAKRSDFYLRVRSRPIIEDCSGVRFAPYCLRYEGIEEDLRGTGLDAETGNWS 289

Query: 314 NVDDFKWLRAVQSPNWSILPEDERIGIVDISNSENGKEEI 353
           NVDDF+WLRAVQSPNWS+LPE+ER+G V+IS+ +NG EEI
Sbjct: 290 NVDDFRWLRAVQSPNWSVLPENERVGTVEISDLKNGDEEI 329