Miyakogusa Predicted Gene

Lj6g3v0484020.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0484020.1 tr|C1FHE8|C1FHE8_MICSR Predicted protein
OS=Micromonas sp. (strain RCC299 / NOUM17) GN=MICPUN_62058
,26.15,0.0000007,seg,NULL; coiled-coil,NULL,CUFF.57906.1
         (202 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g44810.1                                                       295   2e-80
Glyma08g44810.2                                                       233   1e-61

>Glyma08g44810.1 
          Length = 198

 Score =  295 bits (755), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 144/198 (72%), Positives = 167/198 (84%)

Query: 5   MEAMVKKFQSKFRKVREEMNQWNELQSCLISQFRNASYIVERLEVLQNSHNYGVLKCVSG 64
           MEA+VKKFQSKFRKVREEM++W+ELQSCLISQFRNAS+IV+RL+VLQNS+NYGVL C SG
Sbjct: 1   MEAIVKKFQSKFRKVREEMSRWDELQSCLISQFRNASHIVDRLQVLQNSNNYGVLNCASG 60

Query: 65  VREALLAKQIESLVNILVSMKKTLEDFHCVVLSLEKIHREGRQLVKGGSSRPTIKQLQQR 124
           +++ALL KQIESL NILVSM+KTLE+FHC+VLSL+KIHR+ RQ VKGGS    +KQLQQ+
Sbjct: 61  LKDALLVKQIESLRNILVSMRKTLEEFHCIVLSLDKIHRDSRQQVKGGSCHLNMKQLQQQ 120

Query: 125 VGIKPTLNDCLDGLLFLHEIHNSEYXXXXXXXXXXXXXXXXPSASDLGALQQLLVDQPNL 184
           +GIKP+L  CLD L+F+HEI+NSEY                PS SDLGALQQLLVDQPNL
Sbjct: 121 IGIKPSLIYCLDSLMFIHEIYNSEYLLKSSVISALSEIALKPSDSDLGALQQLLVDQPNL 180

Query: 185 LTEEVQFVFDVIFAEELS 202
            TEEVQFVFDVIFAEELS
Sbjct: 181 QTEEVQFVFDVIFAEELS 198


>Glyma08g44810.2 
          Length = 171

 Score =  233 bits (593), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 109/145 (75%), Positives = 132/145 (91%)

Query: 5   MEAMVKKFQSKFRKVREEMNQWNELQSCLISQFRNASYIVERLEVLQNSHNYGVLKCVSG 64
           MEA+VKKFQSKFRKVREEM++W+ELQSCLISQFRNAS+IV+RL+VLQNS+NYGVL C SG
Sbjct: 1   MEAIVKKFQSKFRKVREEMSRWDELQSCLISQFRNASHIVDRLQVLQNSNNYGVLNCASG 60

Query: 65  VREALLAKQIESLVNILVSMKKTLEDFHCVVLSLEKIHREGRQLVKGGSSRPTIKQLQQR 124
           +++ALL KQIESL NILVSM+KTLE+FHC+VLSL+KIHR+ RQ VKGGS    +KQLQQ+
Sbjct: 61  LKDALLVKQIESLRNILVSMRKTLEEFHCIVLSLDKIHRDSRQQVKGGSCHLNMKQLQQQ 120

Query: 125 VGIKPTLNDCLDGLLFLHEIHNSEY 149
           +GIKP+L  CLD L+F+HEI+NSEY
Sbjct: 121 IGIKPSLIYCLDSLMFIHEIYNSEY 145