Miyakogusa Predicted Gene

Lj6g3v0468290.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0468290.1 tr|B9MZQ3|B9MZQ3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_595547 PE=3 SV=1,66.67,2e-19,
,CUFF.58143.1
         (63 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g42530.1                                                       119   1e-27
Glyma03g40000.2                                                       113   5e-26
Glyma03g40000.1                                                       113   5e-26
Glyma10g29770.1                                                       110   4e-25

>Glyma19g42530.1 
          Length = 551

 Score =  119 bits (297), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 53/63 (84%), Positives = 57/63 (90%)

Query: 1  MYSFAQRDDIEVLDEPLYANFLRVTGLDRPYRDILLSKMEPDGNQIVEDTIYGPGNKKYR 60
          MYSFAQRDDIEVLDEPLYANFLRVTGLDRPYR+ LLSKME DGN++  D I+GPG KKYR
Sbjct: 23 MYSFAQRDDIEVLDEPLYANFLRVTGLDRPYREELLSKMEADGNKVTNDIIFGPGKKKYR 82

Query: 61 FCK 63
          FCK
Sbjct: 83 FCK 85


>Glyma03g40000.2 
          Length = 517

 Score =  113 bits (282), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 50/63 (79%), Positives = 56/63 (88%)

Query: 1  MYSFAQRDDIEVLDEPLYANFLRVTGLDRPYRDILLSKMEPDGNQIVEDTIYGPGNKKYR 60
          MYSF+QRDDIEVLDEPLYANFLRVTGLDRPYR+ LLSKME DG+++  D I+ PG KKYR
Sbjct: 23 MYSFSQRDDIEVLDEPLYANFLRVTGLDRPYREELLSKMEADGDKVTNDIIFAPGKKKYR 82

Query: 61 FCK 63
          FCK
Sbjct: 83 FCK 85


>Glyma03g40000.1 
          Length = 557

 Score =  113 bits (282), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 50/63 (79%), Positives = 56/63 (88%)

Query: 1  MYSFAQRDDIEVLDEPLYANFLRVTGLDRPYRDILLSKMEPDGNQIVEDTIYGPGNKKYR 60
          MYSF+QRDDIEVLDEPLYANFLRVTGLDRPYR+ LLSKME DG+++  D I+ PG KKYR
Sbjct: 23 MYSFSQRDDIEVLDEPLYANFLRVTGLDRPYREELLSKMEADGDKVTNDIIFAPGKKKYR 82

Query: 61 FCK 63
          FCK
Sbjct: 83 FCK 85


>Glyma10g29770.1 
          Length = 562

 Score =  110 bits (274), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 50/63 (79%), Positives = 56/63 (88%)

Query: 1  MYSFAQRDDIEVLDEPLYANFLRVTGLDRPYRDILLSKMEPDGNQIVEDTIYGPGNKKYR 60
          MYSFAQRDDIEVLDEPLYANFLRVT + RPY++ LLSKME DGN++V+D IY PGN KYR
Sbjct: 18 MYSFAQRDDIEVLDEPLYANFLRVTAVHRPYKEELLSKMESDGNKVVKDIIYRPGNSKYR 77

Query: 61 FCK 63
          FCK
Sbjct: 78 FCK 80