Miyakogusa Predicted Gene

Lj6g3v0451100.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0451100.2 Non Chatacterized Hit- tr|B6T1M8|B6T1M8_MAIZE
Putative uncharacterized protein OS=Zea mays PE=4 SV=1,56.96,7e-19,no
description,Tetratricopeptide-like helical; Sel1-like
repeats.,Sel1-like; UNKNOWN PROTEIN,NULL; S,CUFF.57868.2
         (154 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g35790.2                                                       216   8e-57
Glyma11g35790.1                                                       216   8e-57
Glyma18g02620.1                                                       215   1e-56
Glyma01g31990.1                                                       135   2e-32
Glyma03g05120.3                                                       132   2e-31
Glyma03g05120.2                                                       132   2e-31
Glyma03g05120.1                                                       132   2e-31
Glyma09g41640.1                                                       125   1e-29

>Glyma11g35790.2 
          Length = 144

 Score =  216 bits (550), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 116/149 (77%), Positives = 123/149 (82%), Gaps = 6/149 (4%)

Query: 1   MGKSLESVARLQELSRIVSSA-KPYRSKGTAQPRSANRVATPRTGAKPAAFAVETPKKKE 59
           MGK LES ARL+ELSRIVSSA KP RSKGT  PRS NRVATPR  A P    VE  KK E
Sbjct: 1   MGKYLESAARLEELSRIVSSAAKPNRSKGTL-PRSPNRVATPRI-ANPIGVKVEPAKKME 58

Query: 60  AVEAEQCRTPLSKVVADCTKRWFQDTLKEARAGDSGMQVLVGQMYYSGYGVPRDPRKGHA 119
            +E   CRTPL+KVVADC+KRWFQDTLKEA+AGDS MQVLVGQMYYSGYGVPRDP+KGH 
Sbjct: 59  PLE---CRTPLAKVVADCSKRWFQDTLKEAKAGDSAMQVLVGQMYYSGYGVPRDPQKGHV 115

Query: 120 WISKASRSRNSVWKVSEKPPGYRASDSDS 148
           WISKASR+RNSVWKV  K PGYRASDSDS
Sbjct: 116 WISKASRNRNSVWKVCGKRPGYRASDSDS 144


>Glyma11g35790.1 
          Length = 144

 Score =  216 bits (550), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 116/149 (77%), Positives = 123/149 (82%), Gaps = 6/149 (4%)

Query: 1   MGKSLESVARLQELSRIVSSA-KPYRSKGTAQPRSANRVATPRTGAKPAAFAVETPKKKE 59
           MGK LES ARL+ELSRIVSSA KP RSKGT  PRS NRVATPR  A P    VE  KK E
Sbjct: 1   MGKYLESAARLEELSRIVSSAAKPNRSKGTL-PRSPNRVATPRI-ANPIGVKVEPAKKME 58

Query: 60  AVEAEQCRTPLSKVVADCTKRWFQDTLKEARAGDSGMQVLVGQMYYSGYGVPRDPRKGHA 119
            +E   CRTPL+KVVADC+KRWFQDTLKEA+AGDS MQVLVGQMYYSGYGVPRDP+KGH 
Sbjct: 59  PLE---CRTPLAKVVADCSKRWFQDTLKEAKAGDSAMQVLVGQMYYSGYGVPRDPQKGHV 115

Query: 120 WISKASRSRNSVWKVSEKPPGYRASDSDS 148
           WISKASR+RNSVWKV  K PGYRASDSDS
Sbjct: 116 WISKASRNRNSVWKVCGKRPGYRASDSDS 144


>Glyma18g02620.1 
          Length = 159

 Score =  215 bits (548), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 117/156 (75%), Positives = 127/156 (81%), Gaps = 4/156 (2%)

Query: 1   MGKSLESVARLQELSRIVSSA-KPYRSKGTAQPRSANRVATPRTGAKPAAFAVETPKKKE 59
           MGK LES ARL ELSRIVSSA KP R K  A PRS NRVATPR+ A P    VE  KK E
Sbjct: 1   MGKYLESAARLAELSRIVSSAAKPNRPK-RALPRSPNRVATPRS-ANPFGVKVEPAKKME 58

Query: 60  AVEAEQ-CRTPLSKVVADCTKRWFQDTLKEARAGDSGMQVLVGQMYYSGYGVPRDPRKGH 118
            +E EQ CRTPL+KVV+DC+KRWFQDTLKEA+AGD+ MQVLVGQMYYSGYGV RDP+KGH
Sbjct: 59  PLEEEQQCRTPLAKVVSDCSKRWFQDTLKEAKAGDTTMQVLVGQMYYSGYGVARDPQKGH 118

Query: 119 AWISKASRSRNSVWKVSEKPPGYRASDSDSCEPEGK 154
           AWISKASR+RNSVWK+  K PGYRASDSDSCE E K
Sbjct: 119 AWISKASRNRNSVWKLCGKRPGYRASDSDSCELEEK 154


>Glyma01g31990.1 
          Length = 100

 Score =  135 bits (339), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 61/84 (72%), Positives = 70/84 (83%)

Query: 67  RTPLSKVVADCTKRWFQDTLKEARAGDSGMQVLVGQMYYSGYGVPRDPRKGHAWISKASR 126
           R  LS+VVADC KRWF+D LKEA+AGD  MQVLVGQMYY GYGVPRD +KG  W++KASR
Sbjct: 12  RVALSEVVADCVKRWFRDALKEAKAGDINMQVLVGQMYYGGYGVPRDAQKGRVWLTKASR 71

Query: 127 SRNSVWKVSEKPPGYRASDSDSCE 150
           +R+SVWKV +K PGY ASDSDS E
Sbjct: 72  TRSSVWKVGDKHPGYNASDSDSDE 95


>Glyma03g05120.3 
          Length = 100

 Score =  132 bits (331), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 60/84 (71%), Positives = 70/84 (83%)

Query: 67  RTPLSKVVADCTKRWFQDTLKEARAGDSGMQVLVGQMYYSGYGVPRDPRKGHAWISKASR 126
           R  LS+VVADC KRWF+D LKEA+AGD  MQVLVGQMY SGYGVPRD +KG  W++KAS+
Sbjct: 12  RVALSEVVADCVKRWFRDALKEAKAGDINMQVLVGQMYNSGYGVPRDAQKGRVWVTKASK 71

Query: 127 SRNSVWKVSEKPPGYRASDSDSCE 150
           +R+SVWKV +K PGY ASDSDS E
Sbjct: 72  ARSSVWKVGDKHPGYNASDSDSDE 95


>Glyma03g05120.2 
          Length = 100

 Score =  132 bits (331), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 60/84 (71%), Positives = 70/84 (83%)

Query: 67  RTPLSKVVADCTKRWFQDTLKEARAGDSGMQVLVGQMYYSGYGVPRDPRKGHAWISKASR 126
           R  LS+VVADC KRWF+D LKEA+AGD  MQVLVGQMY SGYGVPRD +KG  W++KAS+
Sbjct: 12  RVALSEVVADCVKRWFRDALKEAKAGDINMQVLVGQMYNSGYGVPRDAQKGRVWVTKASK 71

Query: 127 SRNSVWKVSEKPPGYRASDSDSCE 150
           +R+SVWKV +K PGY ASDSDS E
Sbjct: 72  ARSSVWKVGDKHPGYNASDSDSDE 95


>Glyma03g05120.1 
          Length = 100

 Score =  132 bits (331), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 60/84 (71%), Positives = 70/84 (83%)

Query: 67  RTPLSKVVADCTKRWFQDTLKEARAGDSGMQVLVGQMYYSGYGVPRDPRKGHAWISKASR 126
           R  LS+VVADC KRWF+D LKEA+AGD  MQVLVGQMY SGYGVPRD +KG  W++KAS+
Sbjct: 12  RVALSEVVADCVKRWFRDALKEAKAGDINMQVLVGQMYNSGYGVPRDAQKGRVWVTKASK 71

Query: 127 SRNSVWKVSEKPPGYRASDSDSCE 150
           +R+SVWKV +K PGY ASDSDS E
Sbjct: 72  ARSSVWKVGDKHPGYNASDSDSDE 95


>Glyma09g41640.1 
          Length = 100

 Score =  125 bits (315), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 57/84 (67%), Positives = 66/84 (78%)

Query: 60  AVEAEQCRTPLSKVVADCTKRWFQDTLKEARAGDSGMQVLVGQMYYSGYGVPRDPRKGHA 119
            +E+   R PLS VVADC KRWF+DTLKEA+AGD  MQVLVGQMYY GYGVPRD +KG  
Sbjct: 6   GIESTGGRAPLSGVVADCVKRWFKDTLKEAKAGDVNMQVLVGQMYYHGYGVPRDAQKGRI 65

Query: 120 WISKASRSRNSVWKVSEKPPGYRA 143
           W++KASR R+SVW+V  K PGY A
Sbjct: 66  WLTKASRVRSSVWRVGGKRPGYNA 89