Miyakogusa Predicted Gene
- Lj6g3v0433920.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0433920.1 tr|D7MH52|D7MH52_ARALL Predicted protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_658867
PE,43.44,6e-19, ,CUFF.57825.1
(150 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma18g04490.1 219 1e-57
Glyma05g27200.1 140 7e-34
Glyma11g33740.1 125 2e-29
Glyma05g27200.2 96 2e-20
Glyma08g10160.1 95 3e-20
Glyma17g05330.1 58 5e-09
Glyma12g09010.1 57 6e-09
Glyma11g19450.1 55 3e-08
Glyma12g30620.1 50 9e-07
Glyma17g14490.1 49 2e-06
Glyma11g03190.1 48 4e-06
>Glyma18g04490.1
Length = 141
Score = 219 bits (557), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 111/142 (78%), Positives = 121/142 (85%), Gaps = 2/142 (1%)
Query: 10 MVLQKNRG-SVYSDDQKAKTNRFLITINILGSAGPIRFVVNEEKLVSGVIDTALKSYARE 68
MV QKN+ Y D QK + NRFL+ INI+GSAGPIRFVVNE++LVSGVIDTALKSYA E
Sbjct: 1 MVSQKNKNKGGYDDHQKPRNNRFLVNINIMGSAGPIRFVVNEKELVSGVIDTALKSYAGE 60
Query: 69 GRLPVLGFDASNFLLYRANAGFDALNPLEPIGSYGERNFVLCKKPVYHPSKTEPQSELLS 128
GRLPVLGFDA+NFLLY ANAGFDAL+PLEPIGS G RNFVLCKK V SK PQSEL+S
Sbjct: 61 GRLPVLGFDATNFLLYCANAGFDALSPLEPIGSLGSRNFVLCKKQV-QSSKAAPQSELVS 119
Query: 129 QKSSGGWKAWLNKSFGLKILSH 150
QKS+GGWKAWLNKSF LKILSH
Sbjct: 120 QKSNGGWKAWLNKSFSLKILSH 141
>Glyma05g27200.1
Length = 135
Score = 140 bits (352), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 78/128 (60%), Positives = 92/128 (71%), Gaps = 2/128 (1%)
Query: 23 DQKAKTNRFLITINILGSAGPIRFVVNEEKLVSGVIDTALKSYAREGRLPVLGFDASNFL 82
+Q AK R LI+IN+LGSAGPIRFVVNEE+LV+ VIDTALKSYAREGRLPVLG + + F+
Sbjct: 10 NQNAK--RLLISINVLGSAGPIRFVVNEEELVAAVIDTALKSYAREGRLPVLGNNTTGFV 67
Query: 83 LYRANAGFDALNPLEPIGSYGERNFVLCKKPVYHPSKTEPQSELLSQKSSGGWKAWLNKS 142
LY + G DAL+P E IGS+G RNFVL KKP + S + SG WKAW NKS
Sbjct: 68 LYCPHLGSDALSPWERIGSHGVRNFVLFKKPEGVADVDGSTALSRSSRGSGSWKAWFNKS 127
Query: 143 FGLKILSH 150
LKI +H
Sbjct: 128 LNLKISTH 135
>Glyma11g33740.1
Length = 80
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/79 (77%), Positives = 71/79 (89%), Gaps = 2/79 (2%)
Query: 13 QKNRGSVYSDDQKAKTNRFLITINILGSAGPIRFVVNEEKLVSGVIDTALKSYAREGRLP 72
KN+GS DD+K ++ RFL+ INI+GSAGPIRFVVNE++LVSGVIDTALKSY+REGRLP
Sbjct: 3 NKNKGSY--DDEKPRSKRFLVNINIMGSAGPIRFVVNEKELVSGVIDTALKSYSREGRLP 60
Query: 73 VLGFDASNFLLYRANAGFD 91
VLGFDA+NFLLY ANAGFD
Sbjct: 61 VLGFDATNFLLYCANAGFD 79
>Glyma05g27200.2
Length = 82
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/70 (68%), Positives = 57/70 (81%), Gaps = 2/70 (2%)
Query: 23 DQKAKTNRFLITINILGSAGPIRFVVNEEKLVSGVIDTALKSYAREGRLPVLGFDASNFL 82
+Q AK R LI+IN+LGSAGPIRFVVNEE+LV+ VIDTALKSYAREGRLPVLG + + F+
Sbjct: 10 NQNAK--RLLISINVLGSAGPIRFVVNEEELVAAVIDTALKSYAREGRLPVLGNNTTGFV 67
Query: 83 LYRANAGFDA 92
LY + G D
Sbjct: 68 LYCPHLGSDG 77
>Glyma08g10160.1
Length = 163
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 21 SDDQKAKTNRFLITINILGSAGPIRFVVNEEKLVSGVIDTALKSYAREGRLPVLGFDASN 80
S Q AK R LI+IN+LGSAGPIRFVVNEE+LV+ VIDTALKSYAREGRLPVLG + +
Sbjct: 9 SQIQNAK--RLLISINVLGSAGPIRFVVNEEELVAAVIDTALKSYAREGRLPVLGNNTTG 66
Query: 81 FLLYRANAGFD-ALNPLEPIGSYGERNFV 108
F LY + G D PL + + F+
Sbjct: 67 FALYCPHLGSDGTFTPLSLLNWIAKIGFL 95
>Glyma17g05330.1
Length = 195
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 29 NRFLITINILGSAGPIRFVVNEEKLVSGVIDTALKSYAREGRLPVL-GFDASNFLLYRAN 87
++ L+ + +L S P++ ++ E V +I A++ Y +EGR P+L +AS+F L+ +
Sbjct: 66 SKMLLKVTMLRSLAPVQMLMTPESTVRDLIAAAVRQYVKEGRRPILPAIEASDFDLHYSQ 125
Query: 88 AGFDALNPLEPIGSYGERNFVLCKK 112
++L+ E + G RNF LC +
Sbjct: 126 FSLESLDRKEKLLELGSRNFFLCPR 150
>Glyma12g09010.1
Length = 195
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 30 RFLITINILGSAGPIRFVVNEEKLVSGVIDTALKSYAREGRLPVL-GFDASNFLLYRANA 88
+ L+ + +GS GP++ V+ E V ++ A++ Y +EGR P+L D S+F L+ +
Sbjct: 72 KLLLKVTSMGSLGPVQVVMTPESTVGDLVAAAVRQYVKEGRRPILPSNDPSHFDLHYSQF 131
Query: 89 GFDALNPLEPIGSYGERNFVLCKK 112
++L+ E + G RNF +C +
Sbjct: 132 SLESLDREEKLRDIGSRNFFMCPR 155
>Glyma11g19450.1
Length = 197
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 30 RFLITINILGSAGPIRFVVNEEKLVSGVIDTALKSYAREGRLPVL-GFDASNFLLYRANA 88
+ L+ + +GS GP++ V+ E V ++ ++ Y +EGR P+L D S+F L+ +
Sbjct: 73 KLLLKVTPMGSLGPVQVVMTPESTVGDLVAVTVRQYVKEGRRPILPSNDPSHFDLHYSQF 132
Query: 89 GFDALNPLEPIGSYGERNFVLCKK 112
+L+ E + G RNF LC +
Sbjct: 133 SLQSLDREEKLMDIGSRNFFLCPR 156
>Glyma12g30620.1
Length = 195
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 30 RFLITINILGSAGPIRFVVNEEKLVSGVIDTALKSYAREGRLPVL-GFDASNFLLYRANA 88
+ L+ + +L S P++ ++ V +I A++ Y +EGR P+L + S F L+ +
Sbjct: 67 KMLLKVTVLRSLAPVQVLMTPGSTVRDLIAAAVRQYVKEGRRPILPSSEVSEFDLHYSQF 126
Query: 89 GFDALNPLEPIGSYGERNFVLC-KKPV 114
++L+ E + G RNF LC +KP
Sbjct: 127 SLESLDRKEKLLELGSRNFFLCPRKPA 153
>Glyma17g14490.1
Length = 165
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 4/120 (3%)
Query: 21 SDDQKAKTNRFLITINILGSAGPIRFVVNEEKLVSGVIDTALKSYAREGRLPVL-GFDAS 79
S+D + ++ L+ + I G ++ +++ E V+ +I AL Y +E R P L D
Sbjct: 45 SNDSFLRPSKLLLNVTIESCLGAVQVLLSPEDTVADLIKAALAFYEKEKRRPFLKNTDPK 104
Query: 80 NFLLYRANAGFDALNPLEPIGSYGERNFVLCKKPVYHPSKTEPQSELLSQKSSGGWKAWL 139
+ L+ ++ ++L + + S G RNF LC KP PS T + + ++ S+ W ++
Sbjct: 105 CYDLHFSSFTLESLKADDKLVSLGSRNFFLCSKP---PSATCFEKKNMAIDSAFPWMVFV 161
>Glyma11g03190.1
Length = 117
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 26 AKTNRFLITINILGSAGPIRFVVNEEKLVSGVIDTALKSYAREGRLPVL-GFDASNFLLY 84
+ ++ L+ + I S G I+ +++ E V+ ++ AL Y +E R P+L D + L+
Sbjct: 24 VRPSKLLLNVTIENSLGAIQVLLSPEDTVADLVKAALLIYEKEKRRPLLKDTDPKCYDLH 83
Query: 85 RANAGFDALNPLEPIGSYGERNFVLCKKPV 114
++ +L E + + G RNF LC KP+
Sbjct: 84 YSSYTLQSLKQNEKLKNLGSRNFFLCSKPL 113