Miyakogusa Predicted Gene

Lj6g3v0405290.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0405290.1 Non Chatacterized Hit- tr|F6HI02|F6HI02_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,36.05,7e-18,no
description,Armadillo-like helical; IMPORTIN-5 (IMPORTIN SUBUNIT
BETA-3),NULL; IMPORTIN BETA,NULL,gene.g64131.t1.1
         (431 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g33390.1                                                       167   2e-41
Glyma16g04400.2                                                       147   2e-35
Glyma16g04400.1                                                       147   2e-35
Glyma19g29010.1                                                       146   5e-35
Glyma05g28950.1                                                       145   6e-35
Glyma08g12120.1                                                       142   5e-34
Glyma14g17760.1                                                       120   4e-27
Glyma19g24440.1                                                        63   5e-10

>Glyma11g33390.1 
          Length = 519

 Score =  167 bits (423), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/254 (42%), Positives = 143/254 (56%), Gaps = 10/254 (3%)

Query: 1   MVSREPILLRPYMCDMVLDALQIAESG-VARGTRRLVIGMVVSMAEVRECEMVLPSLLDQ 59
           +VSR+P LL+PYM DMVLD LQIAESG ++  T RL   +V++MAE +E E V  +L   
Sbjct: 265 LVSRQPQLLKPYMNDMVLDVLQIAESGGLSDETHRLAFELVMAMAEEKEYENVFANL-PY 323

Query: 60  TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKGLEKVCAAVGGIRTVAVVRE 119
                                                 +K L+K+C  +G  + V V  E
Sbjct: 324 RIVSKLFLVPMKMLQRLAEDDGERELKNEKVFDVYEFGMKSLKKLCVVLGASKAVPVAFE 383

Query: 120 LLPPYLD--AAEWKERHAGIEILGVIAKLFSDEMVMMENFLEEVVNRVLKVLQDPQVQVR 177
           +   +LD  AA WKERHAGI +L VIA+ FSDEMV+MENFL  VV ++LK +QD   QVR
Sbjct: 384 VFRLHLDDDAAYWKERHAGITMLSVIAEEFSDEMVLMENFLVGVVTKILKSMQDSHTQVR 443

Query: 178 LAAFNLMQMPTNFAQALQILYAQRFGHAFSIALVHEEESNVK--EEAAIAM---LFFLKN 232
           LA F  M+ PTNF Q +QILY  R  HAF  AL +E+   VK   +A++ +   +F  K+
Sbjct: 444 LATFKFMETPTNFVQVVQILYHHRLVHAFCTALDNEQVVKVKRFRDASVLVGRCVFTWKH 503

Query: 233 TLPES-LTLFKSAD 245
            LP + L +F SA+
Sbjct: 504 YLPNNFLVVFWSAN 517


>Glyma16g04400.2 
          Length = 1114

 Score =  147 bits (372), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 72/156 (46%), Positives = 105/156 (67%)

Query: 261  GIRIYAELGTPKLKPYIHRLISELIMLIKDPNRPVSENSKAQDIAVSAIGRICEFHRECI 320
            G+ + AE G    KP +   +S L  +I+ PN   S+N  A D AVSA+G+IC+FHR+ I
Sbjct: 944  GVGVCAEFGGSVFKPLVGEALSRLDAVIRHPNALHSDNIMAYDNAVSALGKICQFHRDSI 1003

Query: 321  DGSQLVPAWLSFLPLKNDLIEAKLMHEQLSLMVSRFDKDLFGPANQNLEKIITVFIQVIE 380
            + +Q+VPAWL+ LP+K DLIEAK++H+QL  MV R D++L GP NQ L KI+ VF +++ 
Sbjct: 1004 NAAQVVPAWLNCLPIKGDLIEAKVVHDQLCSMVERSDRELIGPNNQYLSKIVAVFAEILC 1063

Query: 381  EGGNLATPETINQMNDLLTELARHIPQSALDSILVS 416
             G NLA  +T+++M +LL +L + +P S L S   S
Sbjct: 1064 AGNNLANEQTVSRMINLLRQLQQTLPPSTLASTWSS 1099



 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 90/164 (54%), Gaps = 6/164 (3%)

Query: 101 LEKVCAAVGGIRTVAVVRELLPPYLDAAEWKERHAGIEILGVIAKLFSDEMVMMENFLEE 160
           L+++  ++GG   V V  ELLP YL A EW++ HA +  L  IA+  S   VM++N LE+
Sbjct: 361 LDRLSISLGGNTIVPVASELLPTYLSAPEWEKHHAALIALAQIAEGCSK--VMIKN-LEQ 417

Query: 161 VVNRVLKVLQDPQVQVRLAAFNLM-QMPTNFAQALQILYAQRFGHAFSIALVHEEESNVK 219
           V++ +L    DP  +V+ AA N + Q+ T+    LQ+ +      A + A+   +   V+
Sbjct: 418 VLSMILNSFHDPHPRVQWAAINAIGQLSTDLGPDLQVKFHHLVLPALAGAMDDFQNPRVQ 477

Query: 220 EEAAIAMLFFLKNTLPESLTLFKSADTAMANLLSLIKEGARGIR 263
             AA A+L F +N   + LT +   D  ++ LL L++ G + ++
Sbjct: 478 AHAASAVLNFTENCTSDILTPY--LDGIVSKLLVLLQNGKQMVQ 519


>Glyma16g04400.1 
          Length = 1114

 Score =  147 bits (372), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 72/156 (46%), Positives = 105/156 (67%)

Query: 261  GIRIYAELGTPKLKPYIHRLISELIMLIKDPNRPVSENSKAQDIAVSAIGRICEFHRECI 320
            G+ + AE G    KP +   +S L  +I+ PN   S+N  A D AVSA+G+IC+FHR+ I
Sbjct: 944  GVGVCAEFGGSVFKPLVGEALSRLDAVIRHPNALHSDNIMAYDNAVSALGKICQFHRDSI 1003

Query: 321  DGSQLVPAWLSFLPLKNDLIEAKLMHEQLSLMVSRFDKDLFGPANQNLEKIITVFIQVIE 380
            + +Q+VPAWL+ LP+K DLIEAK++H+QL  MV R D++L GP NQ L KI+ VF +++ 
Sbjct: 1004 NAAQVVPAWLNCLPIKGDLIEAKVVHDQLCSMVERSDRELIGPNNQYLSKIVAVFAEILC 1063

Query: 381  EGGNLATPETINQMNDLLTELARHIPQSALDSILVS 416
             G NLA  +T+++M +LL +L + +P S L S   S
Sbjct: 1064 AGNNLANEQTVSRMINLLRQLQQTLPPSTLASTWSS 1099



 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 90/164 (54%), Gaps = 6/164 (3%)

Query: 101 LEKVCAAVGGIRTVAVVRELLPPYLDAAEWKERHAGIEILGVIAKLFSDEMVMMENFLEE 160
           L+++  ++GG   V V  ELLP YL A EW++ HA +  L  IA+  S   VM++N LE+
Sbjct: 361 LDRLSISLGGNTIVPVASELLPTYLSAPEWEKHHAALIALAQIAEGCSK--VMIKN-LEQ 417

Query: 161 VVNRVLKVLQDPQVQVRLAAFNLM-QMPTNFAQALQILYAQRFGHAFSIALVHEEESNVK 219
           V++ +L    DP  +V+ AA N + Q+ T+    LQ+ +      A + A+   +   V+
Sbjct: 418 VLSMILNSFHDPHPRVQWAAINAIGQLSTDLGPDLQVKFHHLVLPALAGAMDDFQNPRVQ 477

Query: 220 EEAAIAMLFFLKNTLPESLTLFKSADTAMANLLSLIKEGARGIR 263
             AA A+L F +N   + LT +   D  ++ LL L++ G + ++
Sbjct: 478 AHAASAVLNFTENCTSDILTPY--LDGIVSKLLVLLQNGKQMVQ 519


>Glyma19g29010.1 
          Length = 1118

 Score =  146 bits (368), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 71/156 (45%), Positives = 105/156 (67%)

Query: 261  GIRIYAELGTPKLKPYIHRLISELIMLIKDPNRPVSENSKAQDIAVSAIGRICEFHRECI 320
            G+ + AE G     P +   +S L  +I+ PN   ++N  A D AVSA+G+IC+FHR+ I
Sbjct: 948  GVGVCAEFGGSVFSPLVGEALSRLDAVIRHPNALHADNIMAYDNAVSALGKICQFHRDSI 1007

Query: 321  DGSQLVPAWLSFLPLKNDLIEAKLMHEQLSLMVSRFDKDLFGPANQNLEKIITVFIQVIE 380
            + +Q+VPAWLS LP+K DLIEAK++H+QL  MV R D++L GP NQ L KI+ VF +++ 
Sbjct: 1008 NAAQVVPAWLSCLPIKGDLIEAKVVHDQLCSMVERSDRELIGPNNQYLSKIVAVFAEILC 1067

Query: 381  EGGNLATPETINQMNDLLTELARHIPQSALDSILVS 416
             G +LAT +T+++M +LL +L + +P S L S   S
Sbjct: 1068 AGNDLATEQTVSRMINLLRQLQQTLPPSTLASTWSS 1103



 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 92/164 (56%), Gaps = 6/164 (3%)

Query: 101 LEKVCAAVGGIRTVAVVRELLPPYLDAAEWKERHAGIEILGVIAKLFSDEMVMMENFLEE 160
           L+++  ++GG   V V  ELLP YL A EW++ HA +  L  IA+  S   VM++N LE+
Sbjct: 365 LDRLSISLGGNTIVPVASELLPTYLAAPEWEKHHAALIALAQIAEGCSK--VMIKN-LEQ 421

Query: 161 VVNRVLKVLQDPQVQVRLAAFNLM-QMPTNFAQALQILYAQRFGHAFSIALVHEEESNVK 219
           V++ +L   +DP  +VR AA N + Q+ T+    LQ+ +      A + A+   +   V+
Sbjct: 422 VLSMILNSFRDPHPRVRWAAINAIGQLSTDLGPDLQVKFHHLVLPALAGAMDDFQNPRVQ 481

Query: 220 EEAAIAMLFFLKNTLPESLTLFKSADTAMANLLSLIKEGARGIR 263
             AA A+L F +N  P+ LT +   D  ++ LL L++ G + ++
Sbjct: 482 AHAASAVLNFTENCTPDILTPY--LDGIVSKLLVLLQNGKQMVQ 523


>Glyma05g28950.1 
          Length = 1114

 Score =  145 bits (367), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 73/156 (46%), Positives = 103/156 (66%)

Query: 261  GIRIYAELGTPKLKPYIHRLISELIMLIKDPNRPVSENSKAQDIAVSAIGRICEFHRECI 320
            G+ + AE G    KP +   +S L  +I+ PN   S+N  A D AVSA+G+IC+FHR+ I
Sbjct: 944  GLGVCAEFGGSVFKPLVGEALSRLNAVIQHPNALHSDNVMAYDNAVSALGKICQFHRDSI 1003

Query: 321  DGSQLVPAWLSFLPLKNDLIEAKLMHEQLSLMVSRFDKDLFGPANQNLEKIITVFIQVIE 380
            D +Q+VPAWL+ LP+K DLIEAK++H+QL  M  R D +L GP NQ L KI++VF +V+ 
Sbjct: 1004 DSAQVVPAWLNCLPIKGDLIEAKVVHDQLCSMAERSDSELLGPNNQYLPKIVSVFAEVLC 1063

Query: 381  EGGNLATPETINQMNDLLTELARHIPQSALDSILVS 416
             G +LAT +T  +M +LL +L + +P S L S   S
Sbjct: 1064 AGKDLATEQTAGRMVNLLRQLQQTLPPSTLASTWSS 1099


>Glyma08g12120.1 
          Length = 1114

 Score =  142 bits (359), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 72/156 (46%), Positives = 102/156 (65%)

Query: 261  GIRIYAELGTPKLKPYIHRLISELIMLIKDPNRPVSENSKAQDIAVSAIGRICEFHRECI 320
            G+ + AE G    KP +   +  L  +I+ PN   S+N  A D AVSA+G+IC+FHR+ I
Sbjct: 944  GLGVCAEFGGSVFKPLVGEALLRLNAVIQHPNALHSDNVMAYDNAVSALGKICQFHRDSI 1003

Query: 321  DGSQLVPAWLSFLPLKNDLIEAKLMHEQLSLMVSRFDKDLFGPANQNLEKIITVFIQVIE 380
            D +Q+VPAWL+ LP+K DLIEAK++H+QL  M  R D +L GP NQ L KI++VF +V+ 
Sbjct: 1004 DSAQVVPAWLNCLPIKGDLIEAKVVHDQLCSMAERSDSELLGPNNQYLPKIVSVFAEVLC 1063

Query: 381  EGGNLATPETINQMNDLLTELARHIPQSALDSILVS 416
             G +LAT +T  +M +LL +L + +P S L S   S
Sbjct: 1064 AGKDLATEQTAGRMVNLLRQLQQTLPPSTLASTWSS 1099



 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 123/268 (45%), Gaps = 10/268 (3%)

Query: 1   MVSREPILLRPYMCDMVLDALQIAES-GVARGTRRLVIGMVVSMAEVRECEMVLPSLLDQ 59
           +   EP  LR  + D+V   LQIAE+  +  GTR L I  V+++AE RE    +   L Q
Sbjct: 256 LAGTEPRFLRRQLVDVVGAMLQIAEAESLEEGTRHLAIEFVITLAEARERAPGMMRKLPQ 315

Query: 60  TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKG---LEKVCAAVGGIRTVAV 116
                                                   G   L+++  ++GG   V V
Sbjct: 316 FISRLFTILMKMLLDIEDDPAWHSAETEDEDAGETSNYSVGQECLDRLSISLGGNTIVPV 375

Query: 117 VRELLPPYLDAAEWKERHAGIEILGVIAKLFSDEMVMMENFLEEVVNRVLKVLQDPQVQV 176
             E LP YL A EW++RHA +  L  IA+  S   VM++N LE+VV  VL    D   +V
Sbjct: 376 ASEQLPAYLAAPEWQKRHAALIALAQIAEGCSK--VMIKN-LEQVVAMVLTSFPDQHPRV 432

Query: 177 RLAAFNLM-QMPTNFAQALQILYAQRFGHAFSIALVHEEESNVKEEAAIAMLFFLKNTLP 235
           R AA N + Q+ T+    LQ+ Y Q    A + A+   +   V+  AA A+L F +N  P
Sbjct: 433 RWAAINAIGQLSTDLGPDLQVKYHQGVLPALAGAMDDFQNPRVQAHAASAVLNFSENCTP 492

Query: 236 ESLTLFKSADTAMANLLSLIKEGARGIR 263
           + LT +   D  ++ LL L++ G + ++
Sbjct: 493 DILTPY--LDGIVSKLLVLLQNGKQMVQ 518


>Glyma14g17760.1 
          Length = 306

 Score =  120 bits (300), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 56/117 (47%), Positives = 80/117 (68%)

Query: 261 GIRIYAELGTPKLKPYIHRLISELIMLIKDPNRPVSENSKAQDIAVSAIGRICEFHRECI 320
           G+ + AE G     P +   +S L ++I+ PN   ++N  A D  VSA+G+IC+FHR+ I
Sbjct: 190 GVGVCAEFGGSVFNPLVGEALSRLDVVIRHPNALHADNIIAYDNVVSALGKICQFHRDSI 249

Query: 321 DGSQLVPAWLSFLPLKNDLIEAKLMHEQLSLMVSRFDKDLFGPANQNLEKIITVFIQ 377
           + +Q+VPAWLS LP+K DLIEAK++H+QL  MV R D++L GP NQ L KI+ VF +
Sbjct: 250 NAAQVVPAWLSCLPIKGDLIEAKVVHDQLCSMVERSDRELIGPNNQYLSKIVAVFAE 306


>Glyma19g24440.1 
          Length = 324

 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 73/144 (50%), Gaps = 4/144 (2%)

Query: 99  KGLEKVCAAVGGIRTVAVVRELLPPYLDAAEWKERHAGIEILGVIAKLFSDEMVMMENFL 158
           K L+++  ++GG   V V  E LP YL A EW++RH  +  L  IA+      VM++N L
Sbjct: 29  KCLDRLSISLGGNTIVPVGSEQLPAYLVAPEWQKRHVALIALAQIAEGCL--KVMIKN-L 85

Query: 159 EEVVNRVLKVLQDPQVQVRLAAFNLM-QMPTNFAQALQILYAQRFGHAFSIALVHEEESN 217
           E+VV  VL    D   +VR A  N + Q+ T+    LQ+ Y Q    A + A+   +   
Sbjct: 86  EQVVAMVLTSFPDQHPRVRWADINAIEQLSTDLGPDLQVKYHQGVLPALAGAMDDFQNPR 145

Query: 218 VKEEAAIAMLFFLKNTLPESLTLF 241
           V+  AA  +L F +N  P  L  +
Sbjct: 146 VQAHAASVVLNFSENCTPHILMPY 169