Miyakogusa Predicted Gene

Lj6g3v0392200.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0392200.1 tr|Q94A98|Q94A98_ARATH At1g65900/F12P19_7
OS=Arabidopsis thaliana GN=At1g65900 PE=2 SV=1,62.5,3e-18,
,CUFF.57759.1
         (83 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g05010.1                                                       139   7e-34
Glyma11g33220.1                                                       136   6e-33
Glyma04g18190.1                                                        57   5e-09

>Glyma18g05010.1 
          Length = 396

 Score =  139 bits (350), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 69/83 (83%), Positives = 71/83 (85%), Gaps = 1/83 (1%)

Query: 1  MDSATCYCSWLQPFFLLALVWFFNCGGVQGATPAVKVGNLSKVEDAVNFHIYYGQTFKVI 60
          MDSA   CSWLQ F  LALVW FNCG V GATPAVKVGN SKVEDA NFHIYYGQTFKVI
Sbjct: 1  MDSAPS-CSWLQAFSFLALVWLFNCGCVHGATPAVKVGNFSKVEDAGNFHIYYGQTFKVI 59

Query: 61 KNAIDGQSYLLLQNNSRIASRTK 83
          KN+ DGQSYLLLQ+NSRIASRTK
Sbjct: 60 KNSADGQSYLLLQDNSRIASRTK 82


>Glyma11g33220.1 
          Length = 409

 Score =  136 bits (342), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 68/83 (81%), Positives = 70/83 (84%), Gaps = 1/83 (1%)

Query: 1  MDSATCYCSWLQPFFLLALVWFFNCGGVQGATPAVKVGNLSKVEDAVNFHIYYGQTFKVI 60
          MDSA    SWLQ F  LALVW FNCG V GA+PAVKVGN SKVEDA NFHIYYGQTFKVI
Sbjct: 1  MDSAPS-SSWLQAFSFLALVWLFNCGCVHGASPAVKVGNFSKVEDAGNFHIYYGQTFKVI 59

Query: 61 KNAIDGQSYLLLQNNSRIASRTK 83
          KN+ DGQSYLLLQNNSRIASRTK
Sbjct: 60 KNSADGQSYLLLQNNSRIASRTK 82


>Glyma04g18190.1 
          Length = 187

 Score = 57.0 bits (136), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 28/38 (73%), Positives = 28/38 (73%), Gaps = 1/38 (2%)

Query: 1  MDSATCYCSWLQPFFLLALVWFFNCGGVQGATPAVKVG 38
          MDSA   CSWLQ F  LALVW FNCG V GATPAVKV 
Sbjct: 1  MDSAPS-CSWLQAFSFLALVWLFNCGCVHGATPAVKVA 37