Miyakogusa Predicted Gene
- Lj6g3v0367990.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0367990.1 Non Chatacterized Hit- tr|F6HQV0|F6HQV0_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,48.35,0.00000000001,Hect, E3 ligase catalytic domain,HECT;
HECT,HECT; HECT UBIQUITIN-PROTEIN LIGASE 3 (KAKTUS
PROTEIN),N,CUFF.57748.1
(103 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g19980.1 68 3e-12
Glyma10g05620.2 66 8e-12
Glyma10g05620.1 66 8e-12
Glyma04g00530.1 56 7e-09
Glyma12g03640.1 55 2e-08
Glyma11g11490.2 55 2e-08
Glyma11g11490.1 55 2e-08
Glyma06g00600.2 54 5e-08
Glyma06g00600.1 54 5e-08
>Glyma13g19980.1
Length = 1481
Score = 67.8 bits (164), Expect = 3e-12, Method: Composition-based stats.
Identities = 43/94 (45%), Positives = 53/94 (56%), Gaps = 17/94 (18%)
Query: 27 FQKLELGMWRGDKGD---KIDDQPN--------GLFPHPYLSKTISI------ELFCHFT 69
FQK LGMWR D K + + GLFP P+ S + E+ +F
Sbjct: 1137 FQKSGLGMWREDASSFTLKTNMEAEDIGTHSFYGLFPRPWSSMQDTSGGIQFSEVIKNFF 1196
Query: 70 LLGYIVGRALQDGRILDLNFSKAFYKLIIKKVCS 103
LLG +V +ALQDGRILDL+FSKAFYKLI+ K S
Sbjct: 1197 LLGQVVAKALQDGRILDLHFSKAFYKLILGKELS 1230
>Glyma10g05620.2
Length = 1557
Score = 66.2 bits (160), Expect = 8e-12, Method: Composition-based stats.
Identities = 43/94 (45%), Positives = 52/94 (55%), Gaps = 17/94 (18%)
Query: 27 FQKLELGMWRGDKGD---KIDDQPN--------GLFPHPYLSKTISI------ELFCHFT 69
FQK L MWR D K + Q GLFP P+ S + E+ +F
Sbjct: 1213 FQKSGLAMWREDDSSFTLKTNLQAEEIGVHSFYGLFPRPWSSMQDTSGGIQFSEVTKNFF 1272
Query: 70 LLGYIVGRALQDGRILDLNFSKAFYKLIIKKVCS 103
LLG +V +ALQDGRILDL+FSKAFYKLI+ K S
Sbjct: 1273 LLGQVVAKALQDGRILDLHFSKAFYKLILGKELS 1306
>Glyma10g05620.1
Length = 1557
Score = 66.2 bits (160), Expect = 8e-12, Method: Composition-based stats.
Identities = 43/94 (45%), Positives = 52/94 (55%), Gaps = 17/94 (18%)
Query: 27 FQKLELGMWRGDKGD---KIDDQPN--------GLFPHPYLSKTISI------ELFCHFT 69
FQK L MWR D K + Q GLFP P+ S + E+ +F
Sbjct: 1213 FQKSGLAMWREDDSSFTLKTNLQAEEIGVHSFYGLFPRPWSSMQDTSGGIQFSEVTKNFF 1272
Query: 70 LLGYIVGRALQDGRILDLNFSKAFYKLIIKKVCS 103
LLG +V +ALQDGRILDL+FSKAFYKLI+ K S
Sbjct: 1273 LLGQVVAKALQDGRILDLHFSKAFYKLILGKELS 1306
>Glyma04g00530.1
Length = 1891
Score = 56.2 bits (134), Expect = 7e-09, Method: Composition-based stats.
Identities = 37/106 (34%), Positives = 50/106 (47%), Gaps = 32/106 (30%)
Query: 25 HIFQKLELGMWRGDKGDK----ID----------------------DQPNGLFPHPYLSK 58
H QK+ L MWR DK ID P GLFP P+ +
Sbjct: 1519 HDLQKVGLQMWRSYSSDKHQMEIDGDEKKKKSEGSGPNLAGDGELVQAPLGLFPRPWPTN 1578
Query: 59 TISIE------LFCHFTLLGYIVGRALQDGRILDLNFSKAFYKLII 98
+ + E + +F LLG ++ +ALQDGR+LDL S AFYKL++
Sbjct: 1579 SDASESSQFSKVIEYFRLLGRVMAKALQDGRLLDLPLSVAFYKLVL 1624
>Glyma12g03640.1
Length = 1877
Score = 55.1 bits (131), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/104 (34%), Positives = 49/104 (47%), Gaps = 30/104 (28%)
Query: 25 HIFQKLELGMWRGDKGDK----ID--------------------DQPNGLFPHPYLSKTI 60
H QK+ L MWR +K ID P GLFP P+ +
Sbjct: 1507 HDLQKVVLQMWRSGSSEKYQMEIDGDEKKMKNSEGSFVGDGELVQAPLGLFPRPWPANAD 1566
Query: 61 SIE------LFCHFTLLGYIVGRALQDGRILDLNFSKAFYKLII 98
+ E + +F LLG ++ +ALQDGR+LDL S AFYKL++
Sbjct: 1567 ASEGTQIFKVIEYFRLLGRVMAKALQDGRLLDLPLSVAFYKLVL 1610
>Glyma11g11490.2
Length = 1861
Score = 55.1 bits (131), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/104 (34%), Positives = 49/104 (47%), Gaps = 30/104 (28%)
Query: 25 HIFQKLELGMWRGDKGDK----ID--------------------DQPNGLFPHPYLSKTI 60
H QK+ L MWR +K ID P GLFP P+ +
Sbjct: 1502 HDLQKIILEMWRSGSSEKYQMKIDGDEKKMKRSEGSFVGDGELVQAPLGLFPRPWSANAD 1561
Query: 61 SIE------LFCHFTLLGYIVGRALQDGRILDLNFSKAFYKLII 98
+ E + +F LLG ++ +ALQDGR+LDL S AFYKL++
Sbjct: 1562 ASEGTQFFKVIEYFRLLGRVMAKALQDGRLLDLPMSVAFYKLVL 1605
>Glyma11g11490.1
Length = 1872
Score = 55.1 bits (131), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/104 (34%), Positives = 49/104 (47%), Gaps = 30/104 (28%)
Query: 25 HIFQKLELGMWRGDKGDK----ID--------------------DQPNGLFPHPYLSKTI 60
H QK+ L MWR +K ID P GLFP P+ +
Sbjct: 1502 HDLQKIILEMWRSGSSEKYQMKIDGDEKKMKRSEGSFVGDGELVQAPLGLFPRPWSANAD 1561
Query: 61 SIE------LFCHFTLLGYIVGRALQDGRILDLNFSKAFYKLII 98
+ E + +F LLG ++ +ALQDGR+LDL S AFYKL++
Sbjct: 1562 ASEGTQFFKVIEYFRLLGRVMAKALQDGRLLDLPMSVAFYKLVL 1605
>Glyma06g00600.2
Length = 1895
Score = 53.5 bits (127), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 32/106 (30%)
Query: 25 HIFQKLELGMWRGDKGDK----ID----------------------DQPNGLFPHPYLSK 58
H Q++ L MWR +K ID + P GLFP P+ +
Sbjct: 1523 HDLQQVGLQMWRSYSSEKHQMEIDRDEKKKKSDGSGPNLAGDGELVEAPLGLFPRPWPTN 1582
Query: 59 TISIE------LFCHFTLLGYIVGRALQDGRILDLNFSKAFYKLII 98
+ + E + +F LLG ++ +ALQDGR+LDL S AFYKL++
Sbjct: 1583 SDASEGSRFSKVVEYFRLLGRVMAKALQDGRLLDLPLSVAFYKLVL 1628
>Glyma06g00600.1
Length = 1895
Score = 53.5 bits (127), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 32/106 (30%)
Query: 25 HIFQKLELGMWRGDKGDK----ID----------------------DQPNGLFPHPYLSK 58
H Q++ L MWR +K ID + P GLFP P+ +
Sbjct: 1523 HDLQQVGLQMWRSYSSEKHQMEIDRDEKKKKSDGSGPNLAGDGELVEAPLGLFPRPWPTN 1582
Query: 59 TISIE------LFCHFTLLGYIVGRALQDGRILDLNFSKAFYKLII 98
+ + E + +F LLG ++ +ALQDGR+LDL S AFYKL++
Sbjct: 1583 SDASEGSRFSKVVEYFRLLGRVMAKALQDGRLLDLPLSVAFYKLVL 1628