Miyakogusa Predicted Gene
- Lj6g3v0365860.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0365860.2 Non Chatacterized Hit- tr|K3XDQ8|K3XDQ8_SETIT
Uncharacterized protein OS=Setaria italica GN=Si000025,34.17,2e-18,no
description,Zinc finger, RING/FYVE/PHD-type; FYVE/PHD zinc finger,Zinc
finger, FYVE/PHD-type; Sho,CUFF.57745.2
(619 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma11g33020.1 251 2e-66
Glyma09g28660.1 197 4e-50
Glyma16g33390.1 175 1e-43
Glyma03g41090.1 160 5e-39
Glyma06g01070.1 134 3e-31
Glyma11g07880.1 134 3e-31
Glyma01g37410.1 129 7e-30
Glyma11g07890.1 128 1e-29
Glyma01g37400.1 126 6e-29
Glyma04g01040.1 99 2e-20
>Glyma11g33020.1
Length = 449
Score = 251 bits (641), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 118/164 (71%), Positives = 127/164 (77%)
Query: 14 AEDWCFECMDGGKLRVCDYRGCLKAYHPDCVGKDDSFLEDNSHWTCRSHFCHRCGKTSKF 73
AEDWCF C DGG L VC+YR CLKAYHP C+ +DDSFL++ WTC SH C C K SKF
Sbjct: 13 AEDWCFVCKDGGLLMVCEYRDCLKAYHPRCMAEDDSFLDNECKWTCDSHSCSLCRKPSKF 72
Query: 74 WCLCCPNAVCRNCTNLGEFAVVKGRKGFCRHCSKLAFLIEENAGVDSDGENVDFKDRETY 133
C CCP AVC C + EFA+VKG KGFC HCSKLAFLIEENA VDSDGE VDFKDR+TY
Sbjct: 73 KCFCCPKAVCGKCFSDAEFAIVKGNKGFCTHCSKLAFLIEENADVDSDGEKVDFKDRDTY 132
Query: 134 ECLFSEYYEIIKKKEGLNSQHVQSARNFLKNSKNKSDLDLDEIA 177
ECLFSEYYEIIKK+EGLNSQH A FLKN KNK DLD DEI
Sbjct: 133 ECLFSEYYEIIKKEEGLNSQHAYQAHKFLKNGKNKCDLDPDEIG 176
Score = 100 bits (248), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/65 (75%), Positives = 56/65 (86%)
Query: 199 QNCLAAIVSSNLKLVYLKRSLLEELLKQPENFDSKVCGSFVRIKSDPNNNLQKNSHLLVQ 258
Q+C AAIVSSNLKLVYLKRSL++EL KQPE FD KV GS+VR+KSDP + LQKNSHLLVQ
Sbjct: 304 QSCFAAIVSSNLKLVYLKRSLVDELSKQPETFDGKVLGSYVRVKSDPYDYLQKNSHLLVQ 363
Query: 259 VKGIN 263
V +N
Sbjct: 364 VVVVN 368
>Glyma09g28660.1
Length = 888
Score = 197 bits (500), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 113/250 (45%), Positives = 155/250 (62%), Gaps = 38/250 (15%)
Query: 197 KTQNCLAAIVSSNLKLVYLKRSLLEELLKQPENFDSKVCGSFVRIKSDPNNNLQKNSHLL 256
K ++C AAIV +N+KLVY+KRSL+ +LLK PE F++KV GSF+RI+ DPN+ LQKNSH L
Sbjct: 160 KPRSCFAAIVPANIKLVYMKRSLVMDLLKDPETFETKVVGSFIRIRCDPNDYLQKNSHQL 219
Query: 257 VQVKGINRSSQNDENNKEILLQLSHVPKDVPICKISDDDFTEEECQDLYQRMRNGLLKQP 316
+QV G +SS E N EI LQ+S KD+ I +SDD+F+EEEC++L+QR+++GL+K+P
Sbjct: 220 LQVTGTKKSS---EVNGEIHLQVSGFIKDIRIQMLSDDNFSEEECENLHQRVKDGLVKRP 276
Query: 317 TKLELEQKARSLHEDIIKHWIPRELAFLQNRIDWANEK---------------------- 354
+++EQ AR LHED+IKHW+ RE LQN ID ANEK
Sbjct: 277 MIVDMEQTARVLHEDMIKHWLAREFILLQNLIDRANEKVGYLLNFSPNPQPPELCPGGMG 336
Query: 355 ---RQRRKLSEYLDKRTELENQQEQARLLRNIPRVIPEDKLDSDGCSSKHNGLGQCPNKR 411
Q L EYL +R +L++ EQ RLLR P+ +K + + + PN+
Sbjct: 337 EEWGQPLTLDEYLRRREKLQSPDEQERLLREFPQEF------WQATYTKSSSVTEVPNEV 390
Query: 412 A----DIAGL 417
A DIA L
Sbjct: 391 ANSKLDIADL 400
>Glyma16g33390.1
Length = 724
Score = 175 bits (444), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/230 (44%), Positives = 140/230 (60%), Gaps = 42/230 (18%)
Query: 197 KTQNCLAAIVSSNLKLVYLKRSLLEELLKQPENFDSKVCGSFVRIKSDPNNNLQKNSHLL 256
K ++C AAIV +N+KLVYLKRSL+E+LLK PE F++KV GSF+RI+ DPN+ LQKNSH L
Sbjct: 138 KPRSCFAAIVPANIKLVYLKRSLVEDLLKDPETFETKVVGSFIRIRCDPNDYLQKNSHQL 197
Query: 257 VQVKGINRSSQNDENNKE-----------ILLQLSHVPKDVPICKISDDDFTEEECQDLY 305
+Q D NN E I+ S KD+ I +SDD+F+ EEC+DL+
Sbjct: 198 LQAGW-------DLNNWEKIVLNCVLLFDIINLASGFIKDIRIQMLSDDNFSVEECEDLH 250
Query: 306 QRMRNGLLKQPTKLELEQKARSLHEDIIKHWIPRELAFLQNRIDWANEKRQRR------- 358
QR+++ L+K+P +++EQ AR LHED+ +HW+ REL LQN ID ANEK R
Sbjct: 251 QRVKDCLVKRPMIVDMEQTARVLHEDMTRHWLARELILLQNLIDQANEKVMPRWHGRGEG 310
Query: 359 -----------------KLSEYLDKRTELENQQEQARLLRNIPRVIPEDK 391
L EYL +R +L++ EQ RLLR P+VI +++
Sbjct: 311 AISVLLYGFHLVFFSVNTLDEYLRRREKLQSPDEQERLLREFPQVIADEQ 360
>Glyma03g41090.1
Length = 557
Score = 160 bits (404), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 69/129 (53%), Positives = 84/129 (65%)
Query: 17 WCFECMDGGKLRVCDYRGCLKAYHPDCVGKDDSFLEDNSHWTCRSHFCHRCGKTSKFWCL 76
WCFEC DGG++ VCD+ C K YHP CV KDDSF + +W C HFC C + SKF C+
Sbjct: 23 WCFECKDGGQMVVCDHNDCGKVYHPVCVNKDDSFFDIAKYWVCGRHFCFDCNERSKFHCI 82
Query: 77 CCPNAVCRNCTNLGEFAVVKGRKGFCRHCSKLAFLIEENAGVDSDGENVDFKDRETYECL 136
CPN VCR C +F VV+G KG C CS+LA +IE N DS+G + D ETYE L
Sbjct: 83 SCPNGVCRKCFAASDFTVVRGVKGLCIDCSELAVIIERNLDHDSEGNKITLDDTETYEYL 142
Query: 137 FSEYYEIIK 145
F EY++IIK
Sbjct: 143 FKEYWDIIK 151
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 102/158 (64%), Gaps = 13/158 (8%)
Query: 202 LAAIVSSNLKLVYLKRSLLEELLKQPENFDSKVCGSFVRIKSDPNNNLQKNSHLLVQVKG 261
+I ++N+ L+YLKRSL+ EL KQPE+F K G+FVR K D N++ Q+ S+ L++V G
Sbjct: 400 FVSITANNINLIYLKRSLVLELSKQPESFVVKAVGTFVRAKVDSNDSRQRKSYHLLRVLG 459
Query: 262 INRSSQNDENNKEILLQLSHVPKDVPICKISDDDFTEEECQDLYQRMRNGLLKQPTKLEL 321
+ DE + LLQ+S + K VPI ++SD+DFTE+EC+DL Q+++ GLL + + +E+
Sbjct: 460 VFF----DEISNGTLLQVSFMDKAVPISELSDEDFTEQECEDLQQKVKAGLLPKLSVVEV 515
Query: 322 EQKARSLHEDIIKHW---------IPRELAFLQNRIDW 350
++KA LHEDI KH ++FLQ I +
Sbjct: 516 QEKAEILHEDITKHLNLLLEKSIIFAFYISFLQEFITY 553
>Glyma06g01070.1
Length = 1442
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 88/156 (56%), Gaps = 1/156 (0%)
Query: 10 KEEIAEDWCFECMDGGKLRVCDYRGCLKAYHPDCVGKDDSFLEDNSHWTCRSHFCHRCGK 69
++++ ED CF C DGG L +CD RGC KAYHP CV +D++F W C H C C +
Sbjct: 214 RKKMEEDVCFICFDGGDLVLCDRRGCPKAYHPSCVNRDEAFFRAKGKWNCGWHLCSNCER 273
Query: 70 TSKFWCLCCPNAVCRNCTNLGEFAVVKGRKGFCRHCSKLAFLIEENAGVDSDGENVDFKD 129
+ + C C ++C+ C V+G KGFC C + LIE+N ++ G+ +DF D
Sbjct: 274 NASYMCYTCTFSLCKGCIKDTVILCVRGNKGFCETCMRTVMLIEQNEQGNNVGQ-IDFDD 332
Query: 130 RETYECLFSEYYEIIKKKEGLNSQHVQSARNFLKNS 165
R ++E LF +YY IK+K L + A+N K S
Sbjct: 333 RNSWEYLFKDYYIDIKEKLSLTFDELTQAKNPWKGS 368
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 119/196 (60%), Gaps = 6/196 (3%)
Query: 203 AAIVSSNLKLVYLKRSLLEELLKQPENFDSKVCGSFVRIKSDPNNNLQKNSHLLVQVKGI 262
AAI + N+ L+YL+R+L+E+LL+ E F KV GSFVRI+ + +++ + LVQV G
Sbjct: 560 AAIDNHNINLIYLRRNLVEDLLEDTEKFHDKVVGSFVRIRIS-GSGQKQDLYRLVQVVGT 618
Query: 263 NRSSQNDENNK---EILLQLSHVPKD--VPICKISDDDFTEEECQDLYQRMRNGLLKQPT 317
++++ + K EILL++ ++ K V I IS+ +FTE+EC+ L Q ++ GL+ + T
Sbjct: 619 CKAAEPYKVGKRMTEILLEILNLNKTEIVSIDIISNQEFTEDECKRLRQSIKCGLINRLT 678
Query: 318 KLELEQKARSLHEDIIKHWIPRELAFLQNRIDWANEKRQRRKLSEYLDKRTELENQQEQA 377
+++ KA L E +K W+ E L + D A+EK +R++L E ++K L+ +E+
Sbjct: 679 VGDIQDKALVLQEARVKDWLETETVRLSHLRDRASEKGRRKELRECVEKLQLLKTPEERQ 738
Query: 378 RLLRNIPRVIPEDKLD 393
R L IP + + +D
Sbjct: 739 RRLEEIPEIHVDPNMD 754
>Glyma11g07880.1
Length = 655
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 87/158 (55%), Gaps = 2/158 (1%)
Query: 6 NKMKKEEIAEDWCFECMDGGKLRVCDYRGCLKAYHPDCVGKDDSFLEDNSHWTCRSHFCH 65
++ K+EE ED CF C DGG L +CD RGC KAYHP C+ +D++F + W C H C
Sbjct: 72 SRQKQEE--EDVCFICFDGGSLVLCDRRGCPKAYHPSCIKRDEAFFRSKAKWNCGWHICS 129
Query: 66 RCGKTSKFWCLCCPNAVCRNCTNLGEFAVVKGRKGFCRHCSKLAFLIEENAGVDSDGENV 125
CGK S + C C ++C+ CT +F ++ KG C C K LIE A D V
Sbjct: 130 TCGKGSHYLCYTCTYSLCKGCTKKADFVSIRENKGLCGMCKKTIMLIENCAQGDKAACEV 189
Query: 126 DFKDRETYECLFSEYYEIIKKKEGLNSQHVQSARNFLK 163
DF D+ ++E LF Y+ +K+K L + A+N K
Sbjct: 190 DFDDKSSWEYLFKVYWTYLKEKLSLTFDEILQAKNPYK 227
>Glyma01g37410.1
Length = 474
Score = 129 bits (325), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 90/164 (54%), Gaps = 2/164 (1%)
Query: 6 NKMKKEEIAEDWCFECMDGGKLRVCDYRGCLKAYHPDCVGKDDSFLEDNSHWTCRSHFCH 65
++ KKEE ED CF C DGG L +CD RGC KAYHP C+ +D++F + W C H C
Sbjct: 72 SRQKKEE--EDVCFICFDGGSLVLCDRRGCPKAYHPWCIKRDEAFFRSKAKWNCGWHICS 129
Query: 66 RCGKTSKFWCLCCPNAVCRNCTNLGEFAVVKGRKGFCRHCSKLAFLIEENAGVDSDGENV 125
CGK S + C C ++C+ CT +F ++ KG C C + LIE A D V
Sbjct: 130 ACGKGSHYMCYTCTYSLCKRCTKNADFVSIRENKGLCGICKRTIMLIENCAQGDKAECEV 189
Query: 126 DFKDRETYECLFSEYYEIIKKKEGLNSQHVQSARNFLKNSKNKS 169
DF D+ ++E LF Y+ +K+K L + A+N K + + S
Sbjct: 190 DFDDKSSWEYLFKVYWMYLKEKLSLTFDEILQAKNPCKGTASIS 233
>Glyma11g07890.1
Length = 1218
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 90/162 (55%)
Query: 8 MKKEEIAEDWCFECMDGGKLRVCDYRGCLKAYHPDCVGKDDSFLEDNSHWTCRSHFCHRC 67
+++++ ED CF C DGG L +CD RGC KAYHP C+ +D+ F + W C H C C
Sbjct: 78 VRQQQDEEDVCFICFDGGSLVLCDRRGCPKAYHPACIKRDEEFFRSKAKWNCGWHICSVC 137
Query: 68 GKTSKFWCLCCPNAVCRNCTNLGEFAVVKGRKGFCRHCSKLAFLIEENAGVDSDGENVDF 127
K+S++ C C ++C+ CT +F ++ KG C C + +IE +A +++ VDF
Sbjct: 138 QKSSQYMCYTCTYSLCKGCTKDADFVCIRDNKGLCGICMRTIMMIENSAQGNNEKCEVDF 197
Query: 128 KDRETYECLFSEYYEIIKKKEGLNSQHVQSARNFLKNSKNKS 169
D+ ++E LF Y+ +K K L + A+N K + S
Sbjct: 198 DDKSSWEYLFKVYWMYLKGKLSLTFDELLRAKNPWKGAAPMS 239
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 109/205 (53%), Gaps = 18/205 (8%)
Query: 197 KTQN--CLAAIVSSNLKLVYLKRSLLEELLKQPENFDSKVCGSFVRIKSDPNNNLQKNSH 254
KT N AAI N+KL+Y++RSL+E L + E KV GSFVRI+ ++ Q + +
Sbjct: 426 KTHNPDAYAAIDVHNIKLIYMQRSLMENLTEDAEKIHEKVVGSFVRIRISSSDQKQ-DMY 484
Query: 255 LLVQVKGINRSSQN---DENNKEILLQLSHVPKD--VPICKISDDDFTEEECQDLYQRMR 309
LVQV G ++ ++ +I L++ ++ + + I +IS+ +F+E+EC+ L Q ++
Sbjct: 485 RLVQVVGTSKVAEPYKIGTRTTDIKLEILNLNRKEAISISEISNQEFSEDECKRLRQSIK 544
Query: 310 NGLLKQPTKLELEQKARSLHEDIIKHWIPRELAFLQNRIDWANEKRQRRKLSEYLDKRTE 369
GL K+ T E+ KA +L + + E+ L N R R K Y++K
Sbjct: 545 YGLSKRLTVGEILNKAVTLQAIRVNDLLEAEILRL-------NHLRDRAK---YVEKLQL 594
Query: 370 LENQQEQARLLRNIPRVIPEDKLDS 394
L + +E+ R L IP V + LDS
Sbjct: 595 LNSPEERQRRLHEIPDVHSDPNLDS 619
>Glyma01g37400.1
Length = 637
Score = 126 bits (317), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 87/162 (53%)
Query: 8 MKKEEIAEDWCFECMDGGKLRVCDYRGCLKAYHPDCVGKDDSFLEDNSHWTCRSHFCHRC 67
+++++ ED CF C DGG L +CD RGC KAYH C+ +D+ F + W C H C C
Sbjct: 9 VRQQQDEEDVCFICFDGGSLVLCDRRGCPKAYHLACIKRDEEFFRSKAKWNCGWHICSVC 68
Query: 68 GKTSKFWCLCCPNAVCRNCTNLGEFAVVKGRKGFCRHCSKLAFLIEENAGVDSDGENVDF 127
K+S + C CP ++C+ CT +F V+ KG C C + +IE A + + VDF
Sbjct: 69 QKSSHYMCYTCPYSLCKGCTKDADFVCVRENKGLCGICMRTIMMIENIAQGNKEKCEVDF 128
Query: 128 KDRETYECLFSEYYEIIKKKEGLNSQHVQSARNFLKNSKNKS 169
D+ ++E LF Y+ +K K L + A+N K + S
Sbjct: 129 DDKSSWEYLFKVYWMYLKGKLSLTFDELLQAKNPWKGAAPMS 170
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 92/170 (54%), Gaps = 20/170 (11%)
Query: 197 KTQN--CLAAIVSSNLKLVYLKRSLLEELLKQPENFDSKVCGSFVRIKSDPNNNLQKNSH 254
KT N AAI N+ L+Y++RSL+E L + E KV GSFVRI+ N+ Q + +
Sbjct: 357 KTHNPDAYAAIDVHNINLIYMRRSLMENLTEDTEKIHEKVVGSFVRIRISSNDQKQ-DMY 415
Query: 255 LLVQVKGINRSSQN---DENNKEILLQLSHVPKD--VPICKISDDDFTEEECQDLYQRMR 309
LVQV G ++ ++ +I L++ ++ + + I +IS+ +F+E+EC+ L Q ++
Sbjct: 416 RLVQVVGTSKVAEPYKIGTRTTDIKLEILNLNRKEVISIAEISNQEFSEDECKRLRQSIK 475
Query: 310 NGLLKQPTKLELEQKARSLHEDIIKHWIPRELAFLQNRIDWANEKRQRRK 359
GL K+ T E+ KA +L A N + + E+RQRR+
Sbjct: 476 YGLSKRLTVGEILNKAVTLQ------------AIRVNDLLNSPEERQRRQ 513
>Glyma04g01040.1
Length = 1305
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 55/98 (56%)
Query: 10 KEEIAEDWCFECMDGGKLRVCDYRGCLKAYHPDCVGKDDSFLEDNSHWTCRSHFCHRCGK 69
++++ ED CF C DGG L +CD RGC KAYHP CV +D++F W C H C C +
Sbjct: 158 RKKMEEDVCFICFDGGDLVLCDRRGCPKAYHPSCVNRDEAFFRAKGKWNCGWHLCSNCER 217
Query: 70 TSKFWCLCCPNAVCRNCTNLGEFAVVKGRKGFCRHCSK 107
+ + C C ++C+ C V+G KGFC C +
Sbjct: 218 NASYMCYTCTFSLCKGCIKDAVILRVRGNKGFCETCMR 255
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 14/170 (8%)
Query: 202 LAAIVSSNLKLVYLKRSLLEELLKQPENFDSKVCGSFVRIKSDPNNNLQKNSHLLVQVKG 261
AAI + N+ L+YL+R+L+E+LL+ E F KV GSFVRI+ + +++ + LVQV G
Sbjct: 507 YAAIDNHNINLIYLRRNLVEDLLEDTEKFHDKVVGSFVRIRIS-GSGQKQDLYRLVQVVG 565
Query: 262 INRSSQNDENNK---EILLQLSHVPKD--VPICKISDDDFTEEECQDLYQRMRNGLLKQP 316
++++ + K +ILL++ ++ K V I IS+ +FTE+EC+ L Q ++ GL+ +
Sbjct: 566 TCKAAEPYKVGKRMTDILLEILNLNKTEIVSIDIISNQEFTEDECKRLRQSIKCGLINRL 625
Query: 317 TKLELEQKARSLHEDIIKHWIPRELAFLQNRIDWAN--------EKRQRR 358
T +++ KA L E +K W+ E L + D A E+RQRR
Sbjct: 626 TVGDIQDKALVLQEARVKDWLETETVRLSHLRDRAKKLQLLKTPEERQRR 675