Miyakogusa Predicted Gene

Lj6g3v0353790.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0353790.1 tr|G7J7W0|G7J7W0_MEDTR Intracellular protease
OS=Medicago truncatula GN=MTR_3g064140 PE=4
SV=1,86.6,0,DJ-1_PfpI,ThiJ/PfpI; PUTATIVE THIJ FAMILY INTRACELLULAR
PROTEASE/AMIDASE,NULL; THIJ/PFPI,NULL; no de,CUFF.57737.1
         (388 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g05220.1                                                       691   0.0  
Glyma18g05230.1                                                       444   e-124
Glyma11g32880.1                                                       111   1e-24
Glyma13g34650.1                                                        57   3e-08

>Glyma18g05220.1 
          Length = 387

 Score =  691 bits (1784), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/388 (85%), Positives = 361/388 (93%), Gaps = 1/388 (0%)

Query: 1   MAPKKVLLICGDFVEDSEAMVPFQALQAFGVTVDAVCPGKKSGDACRTAVHMLAPGGQTY 60
           MAPKKVLL+CGDF+ED EAMVPFQALQAFG+ VDAVCPGKKSGD CRTAVH+LA G QTY
Sbjct: 1   MAPKKVLLLCGDFMEDYEAMVPFQALQAFGLAVDAVCPGKKSGDVCRTAVHVLA-GAQTY 59

Query: 61  TETRGHNFTLNATFDEVDAAIYDGLWLPGGRAPEYLAHIPSVVELVAKFVSSGKQIASIC 120
           +ET GHNF+LNATFDEVDAA YDGLW+PGGRAPEYLAH+P VVELV KFVS GKQIASIC
Sbjct: 60  SETVGHNFSLNATFDEVDAASYDGLWVPGGRAPEYLAHVPGVVELVTKFVSLGKQIASIC 119

Query: 121 HGQLILAAAGVVEGRKATAFPGVKPVLLAAGAHWVEPETSATTVVHDNLITASTYDGHTE 180
           HGQLILAAAGVV+GR  TAFP VKPVL+AAGAHWVEP+T A TVV  +LITA+TY+GH E
Sbjct: 120 HGQLILAAAGVVKGRTCTAFPPVKPVLVAAGAHWVEPDTEAATVVDGDLITAATYEGHPE 179

Query: 181 VIQNFVKALGGKISGSNKMILFICGDYMEDYEVMVPFQSLQALGCHVDAVCPTKKAGDTC 240
           +I++FVKALGGKISG +K ILFICGDYMEDYEV VPFQSLQALGCHVDAVCP+KKAGDTC
Sbjct: 180 LIRHFVKALGGKISGFDKKILFICGDYMEDYEVKVPFQSLQALGCHVDAVCPSKKAGDTC 239

Query: 241 PTAVHDFEGDQTYSEKPGHNFTLTATFDEVNVSGYDALVIPGGRSPEYLALNESVIAMVK 300
           PTAVHDFEGDQTYSEKPGH F LTATFD+V+ SGYDALVIPGGR+PEYLALNESVIA+VK
Sbjct: 240 PTAVHDFEGDQTYSEKPGHTFALTATFDDVDPSGYDALVIPGGRAPEYLALNESVIALVK 299

Query: 301 HFMESNKPVASICHGQQILAAAGVLKGRKCTAYPAVKLNVVLSGATWLEPDPISRCFTDG 360
           +F E+ KPVASICHGQQIL+AAGVLKGRKCTAYPAVKLNVVLSGATWLEPDPISRCFTDG
Sbjct: 300 YFFENKKPVASICHGQQILSAAGVLKGRKCTAYPAVKLNVVLSGATWLEPDPISRCFTDG 359

Query: 361 NLVTGAAWPGHPEFISQLMGLLGIQISF 388
           NLVTGAAWPGHPEFI+QL+ LLGIQ+SF
Sbjct: 360 NLVTGAAWPGHPEFIAQLIALLGIQVSF 387


>Glyma18g05230.1 
          Length = 310

 Score =  444 bits (1141), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 211/307 (68%), Positives = 252/307 (82%), Gaps = 1/307 (0%)

Query: 20  MVPFQALQAFGVTVDAVCPGKKSGDACRTAVHMLAPGGQTYTETRGHNFTLNATFDEVDA 79
           MVPFQALQAFG+TVD VCPG+K+GD CRTA+H +  G QTY+E  GH F LNATFDEVDA
Sbjct: 1   MVPFQALQAFGLTVDTVCPGRKAGDVCRTAIHGIH-GDQTYSEMIGHKFVLNATFDEVDA 59

Query: 80  AIYDGLWLPGGRAPEYLAHIPSVVELVAKFVSSGKQIASICHGQLILAAAGVVEGRKATA 139
           + YD LW+PGGR+PEYL+ +P V+ELV KFVS GK IAS CHG LILAA+GV++GRK T 
Sbjct: 60  SSYDVLWVPGGRSPEYLSRVPGVLELVTKFVSLGKLIASTCHGPLILAASGVLKGRKCTG 119

Query: 140 FPGVKPVLLAAGAHWVEPETSATTVVHDNLITASTYDGHTEVIQNFVKALGGKISGSNKM 199
           FP +KPVL+ AGA WV+P+T  TTV     IT++TY+G  E+I   VKALGGKISG+ K 
Sbjct: 120 FPSLKPVLVDAGADWVDPDTMTTTVEDGGFITSTTYEGQPEIISLLVKALGGKISGTKKK 179

Query: 200 ILFICGDYMEDYEVMVPFQSLQALGCHVDAVCPTKKAGDTCPTAVHDFEGDQTYSEKPGH 259
           ILFICGD++ED++  VPFQSLQ+LGCHVDA+CP+K AGD CPTAVHDFEGDQTYSEK GH
Sbjct: 180 ILFICGDFVEDFQAKVPFQSLQSLGCHVDAICPSKFAGDFCPTAVHDFEGDQTYSEKHGH 239

Query: 260 NFTLTATFDEVNVSGYDALVIPGGRSPEYLALNESVIAMVKHFMESNKPVASICHGQQIL 319
           +F LT  FD+V+ S YDALVIPGGRSPEYL+L + ++ +V+HF  +NKPV SI HGQQIL
Sbjct: 240 HFDLTVAFDDVDPSDYDALVIPGGRSPEYLSLMDPILDLVRHFFLNNKPVGSIGHGQQIL 299

Query: 320 AAAGVLK 326
           AAAGVLK
Sbjct: 300 AAAGVLK 306



 Score =  197 bits (500), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 95/174 (54%), Positives = 119/174 (68%)

Query: 214 MVPFQSLQALGCHVDAVCPTKKAGDTCPTAVHDFEGDQTYSEKPGHNFTLTATFDEVNVS 273
           MVPFQ+LQA G  VD VCP +KAGD C TA+H   GDQTYSE  GH F L ATFDEV+ S
Sbjct: 1   MVPFQALQAFGLTVDTVCPGRKAGDVCRTAIHGIHGDQTYSEMIGHKFVLNATFDEVDAS 60

Query: 274 GYDALVIPGGRSPEYLALNESVIAMVKHFMESNKPVASICHGQQILAAAGVLKGRKCTAY 333
            YD L +PGGRSPEYL+    V+ +V  F+   K +AS CHG  ILAA+GVLKGRKCT +
Sbjct: 61  SYDVLWVPGGRSPEYLSRVPGVLELVTKFVSLGKLIASTCHGPLILAASGVLKGRKCTGF 120

Query: 334 PAVKLNVVLSGATWLEPDPISRCFTDGNLVTGAAWPGHPEFISQLMGLLGIQIS 387
           P++K  +V +GA W++PD ++    DG  +T   + G PE IS L+  LG +IS
Sbjct: 121 PSLKPVLVDAGADWVDPDTMTTTVEDGGFITSTTYEGQPEIISLLVKALGGKIS 174



 Score =  148 bits (373), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 72/130 (55%), Positives = 93/130 (71%), Gaps = 1/130 (0%)

Query: 4   KKVLLICGDFVEDSEAMVPFQALQAFGVTVDAVCPGKKSGDACRTAVHMLAPGGQTYTET 63
           KK+L ICGDFVED +A VPFQ+LQ+ G  VDA+CP K +GD C TAVH    G QTY+E 
Sbjct: 178 KKILFICGDFVEDFQAKVPFQSLQSLGCHVDAICPSKFAGDFCPTAVHDFE-GDQTYSEK 236

Query: 64  RGHNFTLNATFDEVDAAIYDGLWLPGGRAPEYLAHIPSVVELVAKFVSSGKQIASICHGQ 123
            GH+F L   FD+VD + YD L +PGGR+PEYL+ +  +++LV  F  + K + SI HGQ
Sbjct: 237 HGHHFDLTVAFDDVDPSDYDALVIPGGRSPEYLSLMDPILDLVRHFFLNNKPVGSIGHGQ 296

Query: 124 LILAAAGVVE 133
            ILAAAGV++
Sbjct: 297 QILAAAGVLK 306


>Glyma11g32880.1 
          Length = 261

 Score =  111 bits (278), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 53/59 (89%), Positives = 54/59 (91%)

Query: 82  YDGLWLPGGRAPEYLAHIPSVVELVAKFVSSGKQIASICHGQLILAAAGVVEGRKATAF 140
           YDGLW+PGGRAPEYLAHIP VVELV KFVS GKQIASICHGQLILAAAGVVEGRK T F
Sbjct: 1   YDGLWVPGGRAPEYLAHIPGVVELVTKFVSLGKQIASICHGQLILAAAGVVEGRKCTLF 59



 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 35/59 (59%), Positives = 44/59 (74%)

Query: 275 YDALVIPGGRSPEYLALNESVIAMVKHFMESNKPVASICHGQQILAAAGVLKGRKCTAY 333
           YD L +PGGR+PEYLA    V+ +V  F+   K +ASICHGQ ILAAAGV++GRKCT +
Sbjct: 1   YDGLWVPGGRAPEYLAHIPGVVELVTKFVSLGKQIASICHGQLILAAAGVVEGRKCTLF 59



 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 29/48 (60%), Positives = 35/48 (72%)

Query: 251 QTYSEKPGHNFTLTATFDEVNVSGYDALVIPGGRSPEYLALNESVIAM 298
           QTYSEKPGH F LTATFD+V+ SGYDALVIPGG +  Y      ++ +
Sbjct: 85  QTYSEKPGHTFALTATFDDVDPSGYDALVIPGGLNDPYNQARSQILML 132


>Glyma13g34650.1 
          Length = 394

 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 152/382 (39%), Gaps = 51/382 (13%)

Query: 5   KVLLICGDFVEDSEAMVPFQALQAFGVTVDAVCPGKKSGDACRTAVHMLAPGGQTYTETR 64
           KVL+   D  E  EA++    L+  G  V        S +    A+H             
Sbjct: 6   KVLVPIADGTEPMEAVIIIDVLRRSGADVTV---ASSSANLAVQALH------------- 49

Query: 65  GHNFTLNATFDEVDAAIYDGLWLPGG-RAPEYLAHIPSVVELVAKFVSSGK-QIASICHG 122
           G     +A+  +V A  +D + LPGG +  E L     +   V K V  G+   A     
Sbjct: 50  GVKIIADASVSDVAATAFDLVALPGGLQGDENLRDCKVLEGFVKKHVEDGRLYAAVCAAP 109

Query: 123 QLILAAAGVVEGRKATAFPGVKPVLLAAGAHWVEPETSATTVVHDNLITASTYDGHT-EV 181
            ++L   G++ G+KAT +P +   L A  A      TS + V  D  +  S   G T E 
Sbjct: 110 AVVLGPWGLLNGKKATCYPALMEKLAAYVAA-----TSESRVQVDGTVVTSRAPGTTMEF 164

Query: 182 IQNFVKALGGKISGSNKMILFICGDYMEDYEVMVPFQSLQ-------------ALGCH-V 227
               ++ L GK          +     +D      F S+Q             A G   +
Sbjct: 165 AIALIEQLIGKEKAYEVAGPLVMRSNHDDEHTFKEFNSVQWTSDNPPKILVPIANGSEEM 224

Query: 228 DAVCPT---KKAGDTCPTAVHDFEGDQTYSEKPGHNFTLTATFDEVNVSGYDALVIPGGR 284
           +AV      ++A      A  + + +   S K           DE     YD +V+PGG 
Sbjct: 225 EAVIIIDILRRAKAKVVVASVEDKLEIVASRKV--KLEADMLLDEATKLSYDLIVLPGGL 282

Query: 285 S-PEYLALNESVIAMVKHFMESNKPVASICHG-QQILAAAGVLKGRKCTAYPAVKLNVVL 342
              +  A +E++++++K   ESNK   +IC     +L   G+LKG+K TA+P   +   L
Sbjct: 283 GGAQTFANSETLVSLLKKQRESNKYYGAICASPALVLEPHGLLKGKKATAFPV--MCDKL 340

Query: 343 SGATWLEPDPISRCFTDGNLVT 364
           S  + +E    +R   DGNL+T
Sbjct: 341 SDQSEVE----NRVVVDGNLIT 358